Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib187G0069 Durio zibethinus HOM05D008165 ORTHO05D007516 1.3e-40 170.2 172 100.0
Duzib150G0960 Durio zibethinus HOM05D008165 ORTHO05D007516 1.4e-34 150.2 83 90.4
Gohir.A05G013100 Gossypium hirsutum HOM05D008165 ORTHO05D007516 5.1e-32 141.7 81 88.9
Gohir.D05G014200 Gossypium hirsutum HOM05D008165 ORTHO05D007516 1.1e-31 140.6 83 86.7
Gorai.009G014200 Gossypium raimondii HOM05D008165 ORTHO05D007516 1.5e-31 140.2 82 87.8
Duzib168G0348 Durio zibethinus HOM05D008165 ORTHO05D007516 9.7e-31 137.5 172 86.6
Thecc.09G137200 Theobroma cacao HOM05D008165 ORTHO05D007516 5.3e-29 131.7 84 81.0
Manes.14G119100 Manihot esculenta HOM05D008165 ORTHO05D007516 5.9e-20 101.7 84 60.7
Manes.06G044400 Manihot esculenta HOM05D008165 ORTHO05D007516 1.9e-18 96.7 84 58.3
QL02p090702 Quercus lobata HOM05D008165 ORTHO05D007516 5.5e-18 95.1 83 56.6
Ah.14g079050 Amaranthus hybridus HOM05D008165 ORTHO05D007516 2.0e-15 86.7 84 53.6
Atru.chr7.2009 Acer truncatum HOM05D008165 ORTHO05D007516 2.6e-15 86.3 84 50.0
MD02G1018600 Malus domestica HOM05D008165 ORTHO05D007516 4.4e-15 85.5 75 54.7
Prupe.7G252200 Prunus persica HOM05D008165 ORTHO05D007516 5.7e-15 85.1 82 51.2
TWI63G1030 Tripterygium wilfordii HOM05D008165 ORTHO05D007516 9.7e-15 84.3 84 52.4
TWI63G1311 Tripterygium wilfordii HOM05D008165 ORTHO05D007516 9.7e-15 84.3 84 52.4
Cfa002265 Carpinus fangiana HOM05D008165 ORTHO05D007516 8.2e-14 81.3 82 53.7
RcHm_v2.0_Chr2g0087101 Rosa chinensis HOM05D008165 ORTHO05D007516 8.2e-14 81.3 73 57.5
GSVIVG01012854001 Vitis vinifera HOM05D008165 ORTHO05D007516 8.2e-14 81.3 85 51.8
THA.LOC104808953 Tarenaya hassleriana HOM05D010884 ORTHO05D012938 1.4e-13 80.5 81 49.4
MD15G1162600 Malus domestica HOM05D008165 ORTHO05D007516 4.1e-13 79.0 79 51.9
FAN23G0205 Fragaria x ananassa HOM05D008165 ORTHO05D007516 5.3e-13 78.6 75 53.3
Hma1.2p1_0343F.1_g130780 Hydrangea macrophylla HOM05D008165 ORTHO05D007516 1.5e-12 77.0 84 50.0
MELO3C004479.2 Cucumis melo HOM05D008165 ORTHO05D007516 2.6e-12 76.3 83 47.0
Glyma.17G107800 Glycine max HOM05D013093 ORTHO05D007516 4.5e-12 75.5 83 53.0
Hund09307 Selenicereus undatus HOM05D008165 ORTHO05D007516 5.9e-12 75.1 79 48.1
ClCG11G003470 Citrullus lanatus HOM05D008165 ORTHO05D007516 7.7e-12 74.7 83 47.0
CsaV3_2G003340 Cucumis sativus L. HOM05D008165 ORTHO05D007516 7.7e-12 74.7 82 46.3
FAN26G1249 Fragaria x ananassa HOM05D008165 ORTHO05D007516 7.7e-12 74.7 75 49.3
Oeu055936.1 Olea europaea HOM05D008165 ORTHO05D007516 1.0e-11 74.3 86 51.2
Rhsim03G0252900 Rhododendron simsii HOM05D008165 ORTHO05D007516 1.7e-11 73.6 69 52.2
Glyma.13G163302 Glycine max HOM05D008165 ORTHO05D007516 2.2e-11 73.2 84 47.6
TWI34G2014 Tripterygium wilfordii HOM05D008165 ORTHO05D007516 2.9e-11 72.8 80 51.2
FvH4_1g02080 Fragaria vesca HOM05D008165 ORTHO05D007516 6.5e-11 71.6 70 52.9
FAN19G0448 Fragaria x ananassa HOM05D008165 ORTHO05D007516 6.5e-11 71.6 70 52.9
THA.LOC104826562 Tarenaya hassleriana HOM05D010884 ORTHO05D012938 8.5e-11 71.2 74 44.6
Glyma.13G163100 Glycine max HOM05D013093 ORTHO05D007516 1.1e-10 70.9 80 52.5
Lj9A703T45 Lonicera japonica HOM05D008165 ORTHO05D007516 1.4e-10 70.5 81 44.4
TAR673G0004 Trochodendron aralioides HOM05D008165 ORTHO05D007516 3.2e-10 69.3 85 48.2
PGSC0003DMG400007836 Solanum tuberosum HOM05D008165 ORTHO05D007516 4.2e-10 68.9 70 52.9
Glyma.17G107600 Glycine max HOM05D008165 ORTHO05D007516 5.5e-10 68.6 82 46.3
Hund21593 Selenicereus undatus HOM05D008165 ORTHO05D007516 5.5e-10 68.6 84 47.6
Sopen12g004750 Solanum pennellii HOM05D008165 ORTHO05D007516 1.2e-09 67.4 70 51.4
TAR383G0642 Trochodendron aralioides HOM05D008165 ORTHO05D007516 1.6e-09 67.0 83 48.2
vmacro23527 Vaccinium macrocarpon HOM05D008165 ORTHO05D007516 1.6e-09 67.0 83 44.6
THA.LOC104815296 Tarenaya hassleriana HOM05D010884 ORTHO05D007516 2.1e-09 66.6 85 45.9
MELO3C004482.2 Cucumis melo HOM05D008165 ORTHO05D007516 3.6e-09 65.9 79 44.3
CsaV3_2G003360 Cucumis sativus L. HOM05D008165 ORTHO05D007516 8.0e-09 64.7 79 43.0
Solyc12g009860.3 Solanum lycopersicum HOM05D008165 ORTHO05D007516 8.0e-09 64.7 70 50.0
CAN.G467.3 Capsicum annuum HOM05D013625 ORTHO05D007516 1.0e-08 64.3 106 45.3
FAN28G1178 Fragaria x ananassa HOM05D008165 ORTHO05D007516 1.0e-08 64.3 93 41.9
VMungo1215G3371 Vigna mungo HOM05D013093 ORTHO05D007516 1.0e-08 64.3 84 46.4
TAR626G1841 Trochodendron aralioides HOM05D008165 ORTHO05D007516 1.4e-08 63.9 69 49.3
Manes.04G109000 Manihot esculenta HOM05D008165 ORTHO05D007516 2.3e-08 63.2 70 47.1
Gohir.D06G051051 Gossypium hirsutum HOM05D047647 ORTHO05D046913 5.2e-08 62.0 37 73.0
Gorai.010G059200 Gossypium raimondii HOM05D047647 ORTHO05D046913 5.2e-08 62.0 37 73.0
Psat4g034960 Pisum sativum HOM05D013093 ORTHO05D007516 6.7e-08 61.6 72 50.0
Nn8g39643 Nelumbo nucifera HOM05D008165 ORTHO05D007516 1.1e-07 60.8 84 44.0
ClCG11G003490 Citrullus lanatus HOM05D008165 ORTHO05D007516 2.0e-07 60.1 75 42.7
RcHm_v2.0_Chr2g0134421 Rosa chinensis HOM05D017007 ORTHO05D020728 2.6e-07 59.7 68 45.6
Nitab4.5_0008536g0060 Nicotiana tabacum HOM05D008165 ORTHO05D007516 3.3e-07 59.3 64 50.0
Phvul.003G172200 Phaseolus vulgaris HOM05D013093 ORTHO05D007516 5.7e-07 58.5 82 43.9
GSVIVG01017457001 Vitis vinifera HOM05D009923 ORTHO05D007516 7.4e-07 58.2 64 48.4
TAR625G0094 Trochodendron aralioides HOM05D008165 ORTHO05D007516 9.7e-07 57.8 62 50.0
Oeu058579.1 Olea europaea HOM05D008165 ORTHO05D007516 1.3e-06 57.4 77 42.9
Medtr4g116080 Medicago truncatula HOM05D013093 ORTHO05D007516 2.2e-06 56.6 83 43.4
CSS0041528 Camellia sinensis var. sinensis HOM05D008165 ORTHO05D007516 2.8e-06 56.2 44 56.8
Sopen07g003520 Solanum pennellii HOM05D013625 ORTHO05D007516 8.2e-06 54.7 106 41.5


User provided reference genes

Program Settings