Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib177G0943 Durio zibethinus HOM05D007776 ORTHO05D009812 6.9e-64 247.3 137 100.0
Duzib116G0238 Durio zibethinus HOM05D007776 ORTHO05D009812 7.7e-31 137.5 133 69.9
Gohir.A05G287000 Gossypium hirsutum HOM05D007776 ORTHO05D009812 1.7e-30 136.3 134 66.4
Thecc.08G190700 Theobroma cacao HOM05D007776 ORTHO05D009812 2.9e-30 135.6 137 69.3
Gohir.D05G288000 Gossypium hirsutum HOM05D007776 ORTHO05D009812 1.4e-29 133.3 134 57.5
Gorai.009G303100 Gossypium raimondii HOM05D007776 ORTHO05D009812 1.4e-29 133.3 134 57.5
Ciclev10002690m.g Citrus clementina HOM05D007776 ORTHO05D009812 1.3e-25 120.2 131 54.2
Potri.013G107300 Populus trichocarpa HOM05D007776 ORTHO05D009812 8.2e-25 117.5 125 54.4
Manes.02G198100 Manihot esculenta HOM05D007776 ORTHO05D009812 3.1e-24 115.5 131 50.4
Prupe.1G555000 Prunus persica HOM05D007776 ORTHO05D009812 1.6e-23 113.2 123 53.7
Potri.019G079800 Populus trichocarpa HOM05D007776 ORTHO05D009812 4.5e-23 111.7 135 51.1
CANSAT25G0596 Cannabis sativa HOM05D007776 ORTHO05D009812 1.3e-22 110.2 120 52.5
TWI14G0313 Tripterygium wilfordii HOM05D007776 ORTHO05D009812 1.3e-22 110.2 118 56.8
FAN04G1877 Fragaria x ananassa HOM05D007776 ORTHO05D009812 3.8e-22 108.6 126 50.0
FAN08G2421 Fragaria x ananassa HOM05D007776 ORTHO05D009812 5.0e-22 108.2 138 48.6
FvH4_5g31870 Fragaria vesca HOM05D007776 ORTHO05D009812 1.9e-21 106.3 126 49.2
FAN18G1270 Fragaria x ananassa HOM05D007776 ORTHO05D009812 1.9e-21 106.3 126 49.2
Nn5g27525 Nelumbo nucifera HOM05D007776 ORTHO05D009812 1.9e-21 106.3 138 50.7
THA.LOC104806792 Tarenaya hassleriana HOM05D007776 ORTHO05D009812 1.9e-21 106.3 143 54.5
FAN04G0521 Fragaria x ananassa HOM05D007776 ORTHO05D009812 3.2e-21 105.5 126 49.2
RcHm_v2.0_Chr7g0227891 Rosa chinensis HOM05D007776 ORTHO05D009812 3.2e-21 105.5 127 52.0
TWI59G0674 Tripterygium wilfordii HOM05D007776 ORTHO05D009812 5.5e-21 104.8 114 55.3
MD15G1406800 Malus domestica HOM05D007776 ORTHO05D009812 3.6e-20 102.1 125 49.6
Cfa012949 Carpinus fangiana HOM05D007776 ORTHO05D009812 4.7e-20 101.7 109 55.0
Sabra19G0091100 Salix brachista HOM05D007776 ORTHO05D009812 6.1e-20 101.3 133 46.6
CiPaw.07G236300 Carya illinoinensis HOM05D007776 ORTHO05D009812 1.8e-19 99.8 106 54.7
PGR042G2621 Punica granatum HOM05D007776 ORTHO05D009812 2.3e-19 99.4 124 52.4
Haze_21304 Corylus avellana HOM05D007776 ORTHO05D009812 5.2e-19 98.2 110 54.5
CiPaw.05G123100 Carya illinoinensis HOM05D007776 ORTHO05D009812 8.8e-19 97.4 104 54.8
Sed0008767 Sechium edule HOM05D007776 ORTHO05D009812 8.8e-19 97.4 108 53.7
Sabra13G0092600 Salix brachista HOM05D007776 ORTHO05D009812 2.0e-18 96.3 133 46.6
Cpa.g.sc507.3 Carica papaya HOM05D007776 ORTHO05D009812 2.6e-18 95.9 120 56.7
Ca_14480_v3 Cicer arietinum L. HOM05D007776 ORTHO05D009812 4.4e-18 95.1 128 48.4
Dinv41753 Davidia involucrata HOM05D000238 ORTHO05D002999 9.7e-18 94.0 115 49.6
AL1G50270 Arabidopsis lyrata HOM05D007776 ORTHO05D009812 1.7e-17 93.2 107 50.5
BcaC08g43737 Brassica carinata HOM05D007776 ORTHO05D009812 1.7e-17 93.2 130 45.4
A09p31800 Brassica napus HOM05D007776 ORTHO05D009812 1.7e-17 93.2 131 45.8
BraA09t38716Z Brassica rapa HOM05D007776 ORTHO05D009812 1.7e-17 93.2 130 45.4
Carub.0001s3303 Capsella rubella HOM05D007776 ORTHO05D009812 1.7e-17 93.2 125 48.0
AT1G35430 Arabidopsis thaliana HOM05D007776 ORTHO05D009812 2.2e-17 92.8 107 50.5
C06p11140 Brassica napus HOM05D007776 ORTHO05D009812 3.7e-17 92.0 131 44.3
BolC6t36249H Brassica oleracea HOM05D007776 ORTHO05D009812 3.7e-17 92.0 131 44.3
VMungo1080G1686 Vigna mungo HOM05D007776 ORTHO05D009812 6.3e-17 91.3 112 50.0
CARHR034200 Cardamine hirsuta HOM05D007776 ORTHO05D009812 1.4e-16 90.1 106 49.1
Sp1g30150 Schrenkiella parvula HOM05D007776 ORTHO05D009812 1.8e-16 89.7 106 49.1
Aa31LG6G8730 Aethionema arabicum HOM05D007776 ORTHO05D009812 3.1e-16 89.0 137 45.3
Psat5g210040 Pisum sativum HOM05D007776 ORTHO05D009812 4.1e-16 88.6 106 50.9
Medtr0045s0130 Medicago truncatula HOM05D007776 ORTHO05D009812 9.1e-16 87.4 101 54.5
TAR628G0395 Trochodendron aralioides HOM05D007776 ORTHO05D009812 1.6e-15 86.7 100 49.0
Lalb_Chr25g0282901 Lupinus albus HOM05D007776 ORTHO05D009812 5.9e-15 84.7 114 45.6
Thhalv10029064m.g Eutrema salsugineum HOM05D007776 ORTHO05D009812 7.7e-15 84.3 140 45.0
TPR.G27845 Trifolium pratense HOM05D000479 ORTHO05D009812 3.8e-14 82.0 101 53.5
Phvul.005G023800 Phaseolus vulgaris HOM05D007776 ORTHO05D009812 1.9e-13 79.7 100 49.0
QL02p026198 Quercus lobata HOM05D007776 ORTHO05D009812 1.9e-13 79.7 103 61.2
Lj3g0020626 Lotus japonicus HOM05D007776 ORTHO05D009812 3.2e-13 79.0 108 48.1
Glyma.15G276200 Glycine max HOM05D007776 ORTHO05D009812 4.2e-13 78.6 78 53.8
BcaC01g04727 Brassica carinata HOM05D007776 ORTHO05D009812 5.5e-13 78.2 113 44.2
COL.COLO4_25869 Corchorus olitorius HOM05D007776 ORTHO05D009812 5.5e-13 78.2 52 76.9
CSS0049282 Camellia sinensis var. sinensis HOM05D007776 ORTHO05D009812 1.2e-12 77.0 108 48.1
ClCG11G008540 Citrullus lanatus HOM05D007776 ORTHO05D009812 4.7e-12 75.1 122 41.8
C03p34420 Brassica napus HOM05D007776 ORTHO05D009812 6.1e-12 74.7 113 43.4
BolC3t15751H Brassica oleracea HOM05D007776 ORTHO05D009812 6.1e-12 74.7 113 43.4
Sopen01g034790 Solanum pennellii HOM05D007776 ORTHO05D009812 8.0e-12 74.3 107 43.9
PGSC0003DMG400006837 Solanum tuberosum HOM05D007776 ORTHO05D009812 1.0e-11 73.9 119 42.0
Thhalv10001838m.g Eutrema salsugineum HOM05D007776 ORTHO05D009812 1.8e-11 73.2 109 45.9
Sp6g08370 Schrenkiella parvula HOM05D007776 ORTHO05D009812 2.3e-11 72.8 122 43.4
BcaB01g02801 Brassica carinata HOM05D007776 ORTHO05D009812 4.0e-11 72.0 113 43.4
CARHR260240 Cardamine hirsuta HOM05D007776 ORTHO05D009812 6.8e-11 71.2 132 41.7
Solyc01g087860.2 Solanum lycopersicum HOM05D007776 ORTHO05D009812 8.8e-11 70.9 117 43.6
A03p28480 Brassica napus HOM05D007776 ORTHO05D009812 3.4e-10 68.9 114 42.1
BraA03t12053Z Brassica rapa HOM05D007776 ORTHO05D009812 3.4e-10 68.9 114 42.1
Glyma.10G090400 Glycine max HOM05D007776 ORTHO05D009812 4.4e-10 68.6 83 49.4
Ah.05g178510 Amaranthus hybridus HOM05D007776 ORTHO05D009812 5.7e-10 68.2 127 41.7
AL6G42920 Arabidopsis lyrata HOM05D007776 ORTHO05D009812 1.3e-09 67.0 138 41.3
MD08G1218400 Malus domestica HOM05D007776 ORTHO05D009812 4.8e-09 65.1 105 41.0
Lsat_1_v5_gn_8_157180 Lactuca sativa HOM05D007776 ORTHO05D009812 6.3e-09 64.7 52 59.6
Rhsim12G0006900 Rhododendron simsii HOM05D007776 ORTHO05D009812 4.1e-08 62.0 95 56.8
EL10Ac1g00128 Beta vulgaris HOM05D007776 ORTHO05D009812 7.0e-08 61.2 145 40.7
ECA233G5618 Erigeron canadensis HOM05D007776 ORTHO05D009812 1.3e-06 57.0 52 51.9
Migut.C01313 Erythranthe guttata HOM05D007776 ORTHO05D009812 2.3e-06 56.2 111 39.6
Lsat_1_v5_gn_3_48301 Lactuca sativa HOM05D007776 ORTHO05D009812 3.8e-06 55.5 110 38.2
AT4G09170 Arabidopsis thaliana HOM05D007776 ORTHO05D009812 5.0e-06 55.1 117 36.8


User provided reference genes

Program Settings