Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib177G0846 Durio zibethinus HOM05D000092 ORTHO05D011915 3.4e-68 261.5 133 100.0
Thecc.05G245100 Theobroma cacao HOM05D000092 ORTHO05D000042 4.4e-31 138.3 150 56.0
Duzib177G0959 Durio zibethinus HOM05D000092 ORTHO05D000042 4.8e-30 134.8 150 57.3
COL.COLO4_28603 Corchorus olitorius HOM05D000092 ORTHO05D000042 8.8e-24 114.0 152 48.7
Duzib177G0743 Durio zibethinus HOM05D000092 ORTHO05D000042 1.8e-13 79.7 168 33.9
Duzib177G0617 Durio zibethinus HOM05D000092 ORTHO05D000042 5.9e-12 74.7 168 33.3
Duzib177G1011 Durio zibethinus HOM05D000092 ORTHO05D000042 7.8e-12 74.3 148 33.1
Potri.005G041101 Populus trichocarpa HOM05D000092 ORTHO05D000042 9.5e-10 67.4 66 53.0
Potri.005G042400 Populus trichocarpa HOM05D000092 ORTHO05D000042 1.6e-09 66.6 66 54.5
Potri.005G042900 Populus trichocarpa HOM05D000092 ORTHO05D000042 1.6e-09 66.6 143 38.5
Thecc.05G202900 Theobroma cacao HOM05D000092 ORTHO05D000042 2.1e-09 66.2 152 34.9
Duzib106G0165 Durio zibethinus HOM05D000092 ORTHO05D000042 3.6e-09 65.5 174 29.9
Duzib106G0813 Durio zibethinus HOM05D000092 ORTHO05D000042 8.0e-09 64.3 161 30.4
Duzib106G1138 Durio zibethinus HOM05D000092 ORTHO05D000042 1.0e-08 63.9 161 32.3
Atru.chr8.2609 Acer truncatum HOM05D000092 ORTHO05D000042 3.1e-08 62.4 92 39.1
Cpa.g.c28428.2 Carica papaya HOM05D000092 ORTHO05D000042 3.1e-08 62.4 87 39.1
Thecc.05G296000 Theobroma cacao HOM05D000092 ORTHO05D000042 4.0e-08 62.0 149 35.6
Duzib106G0568 Durio zibethinus HOM05D000092 ORTHO05D000042 6.8e-08 61.2 155 31.6
Manes.07G061500 Manihot esculenta HOM05D000092 ORTHO05D000042 1.5e-07 60.1 142 33.8
Gorai.011G265900 Gossypium raimondii HOM05D000092 ORTHO05D000042 2.0e-07 59.7 156 32.1
Thecc.05G224600 Theobroma cacao HOM05D000092 ORTHO05D000042 2.0e-07 59.7 138 32.6
Gohir.A11G236000 Gossypium hirsutum HOM05D000092 ORTHO05D000042 2.6e-07 59.3 142 31.7
Ciclev10003128m.g Citrus clementina HOM05D000092 ORTHO05D000042 3.4e-07 58.9 102 39.2
Atru.chr2.1958 Acer truncatum HOM05D000092 ORTHO05D000042 4.4e-07 58.5 92 37.0
CiPaw.08G116200 Carya illinoinensis HOM05D000092 ORTHO05D000042 5.8e-07 58.2 99 39.4
Ciclev10000055m.g Citrus clementina HOM05D000092 ORTHO05D000042 5.8e-07 58.2 146 29.5
Cpa.g.sc504.1 Carica papaya HOM05D000092 ORTHO05D000042 7.5e-07 57.8 147 32.0
Manes.07G063100 Manihot esculenta HOM05D000092 ORTHO05D000042 7.5e-07 57.8 142 33.1
Ciclev10003644m.g Citrus clementina HOM05D000092 ORTHO05D000042 9.8e-07 57.4 107 34.6
Dinv05715 Davidia involucrata HOM05D000092 ORTHO05D000042 9.8e-07 57.4 89 38.2
Gohir.A05G390100 Gossypium hirsutum HOM05D000092 ORTHO05D000042 9.8e-07 57.4 139 33.8
Manes.02G215405 Manihot esculenta HOM05D000092 ORTHO05D000042 9.8e-07 57.4 54 51.9
Manes.07G060716 Manihot esculenta HOM05D000092 ORTHO05D000042 9.8e-07 57.4 142 32.4
COL.COLO4_20550 Corchorus olitorius HOM05D000092 ORTHO05D000042 1.3e-06 57.0 113 31.9
Manes.07G062404 Manihot esculenta HOM05D000092 ORTHO05D000042 1.7e-06 56.6 142 31.7
Medtr2g072080 Medicago truncatula HOM05D000092 ORTHO05D000042 1.7e-06 56.6 65 46.2
Duzib128G1703 Durio zibethinus HOM05D000092 ORTHO05D000042 2.2e-06 56.2 133 34.6
Manes.11G052160 Manihot esculenta HOM05D000092 ORTHO05D000042 2.2e-06 56.2 157 28.7
TPR.G26631 Trifolium pratense HOM05D000092 ORTHO05D000042 2.2e-06 56.2 65 40.0
Atru.chr2.740 Acer truncatum HOM05D000092 ORTHO05D000042 4.9e-06 55.1 74 41.9
Manes.02G215425 Manihot esculenta HOM05D000092 ORTHO05D000042 4.9e-06 55.1 54 50.0
Manes.07G060750 Manihot esculenta HOM05D000092 ORTHO05D000042 4.9e-06 55.1 142 32.4
Manes.07G063001 Manihot esculenta HOM05D000092 ORTHO05D000042 4.9e-06 55.1 142 32.4
CiPaw.08G176800 Carya illinoinensis HOM05D000092 ORTHO05D000042 6.4e-06 54.7 65 44.6
Ciclev10002270m.g Citrus clementina HOM05D000092 ORTHO05D000042 6.4e-06 54.7 97 32.0
Ciclev10003507m.g Citrus clementina HOM05D000092 ORTHO05D000042 6.4e-06 54.7 97 32.0
Gohir.D04G025400 Gossypium hirsutum HOM05D000092 ORTHO05D016306 6.4e-06 54.7 139 34.5
Gohir.D11G246760 Gossypium hirsutum HOM05D000092 ORTHO05D000042 6.4e-06 54.7 137 32.8
Lj6C224G2 Lonicera japonica HOM05D000092 ORTHO05D011915 6.4e-06 54.7 108 37.0
Manes.02G220660 Manihot esculenta HOM05D000092 ORTHO05D000042 6.4e-06 54.7 54 50.0
Manes.10G028400 Manihot esculenta HOM05D000092 ORTHO05D000042 6.4e-06 54.7 152 30.3
Manes.10G028501 Manihot esculenta HOM05D000092 ORTHO05D000042 6.4e-06 54.7 152 30.3
GSVIVG01036188001 Vitis vinifera HOM05D000092 ORTHO05D000042 6.4e-06 54.7 65 43.1
Dinv18646 Davidia involucrata HOM05D000092 ORTHO05D000042 8.3e-06 54.3 75 42.7
Dinv26261 Davidia involucrata HOM05D000092 ORTHO05D000042 8.3e-06 54.3 75 42.7
Gorai.007G262700 Gossypium raimondii HOM05D000092 ORTHO05D000042 8.3e-06 54.3 137 32.8
Medtr0069s0040 Medicago truncatula HOM05D000092 ORTHO05D000042 8.3e-06 54.3 65 47.7


User provided reference genes

Program Settings