Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib177G0175 Durio zibethinus HOM05D016798 ORTHO05D016261 4.5e-170 601.3 326 100.0
Thecc.05G318400 Theobroma cacao HOM05D016798 ORTHO05D016261 1.9e-48 197.2 353 45.6
Gorai.004G238200 Gossypium raimondii HOM05D016798 ORTHO05D016261 1.7e-39 167.5 310 42.3
Gohir.A08G207650 Gossypium hirsutum HOM05D016798 ORTHO05D016261 4.8e-39 166.0 310 42.3
Gohir.D08G224250 Gossypium hirsutum HOM05D016798 ORTHO05D016261 1.5e-37 161.0 309 40.8
Thecc.05G318600 Theobroma cacao HOM05D016798 ORTHO05D016261 9.7e-32 141.7 320 39.7
Gohir.A13G174840 Gossypium hirsutum HOM05D016798 ORTHO05D016261 7.0e-30 135.6 357 37.3
Gohir.D11G280833 Gossypium hirsutum HOM05D034961 ORTHO05D016261 1.7e-28 131.0 320 38.1
Gorai.007G303100 Gossypium raimondii HOM05D034961 ORTHO05D016261 1.4e-27 127.9 325 37.2
Gohir.A11G270666 Gossypium hirsutum HOM05D034961 ORTHO05D016261 3.2e-27 126.7 319 36.7
Dinv24410 Davidia involucrata HOM05D010455 ORTHO05D010927 1.6e-26 124.4 322 32.9
COL.COLO4_03800 Corchorus olitorius HOM05D016798 ORTHO05D016261 2.6e-21 107.1 344 31.7
Potri.013G011950 Populus trichocarpa HOM05D015247 ORTHO05D010927 2.0e-16 90.9 323 29.7
Sabra13G0010500 Salix brachista HOM05D015247 ORTHO05D010927 8.2e-15 85.5 311 29.9
Ciclev10003158m.g Citrus clementina HOM05D015247 ORTHO05D010927 1.8e-14 84.3 323 28.5
QL03p018916 Quercus lobata HOM05D015247 ORTHO05D010927 3.8e-12 76.6 316 27.2
Manes.09G174200 Manihot esculenta HOM05D010455 ORTHO05D010927 5.0e-12 76.3 331 25.4
ECA236G1914 Erigeron canadensis HOM05D000101 ORTHO05D000089 2.1e-10 70.9 70 52.9
Cpa.g.sc48.126 Carica papaya HOM05D010455 ORTHO05D010927 2.7e-10 70.5 93 40.9
Prupe.6G317300 Prunus persica HOM05D010455 ORTHO05D010927 1.0e-09 68.6 94 43.6
unitig_42.g32309 Utricularia gibba HOM05D010455 ORTHO05D010927 6.8e-09 65.9 40 62.5
unitig_899.g14744 Utricularia gibba HOM05D010455 ORTHO05D010927 6.8e-09 65.9 40 62.5
BcaB04g19697 Brassica carinata HOM05D012757 ORTHO05D010927 2.0e-08 64.3 90 37.8
THA.LOC104820098 Tarenaya hassleriana HOM05D012757 ORTHO05D010927 2.0e-08 64.3 103 37.9
A09p05550 Brassica napus HOM05D012757 ORTHO05D010927 5.7e-08 62.8 39 59.0
Migut.B01004 Erythranthe guttata HOM05D010455 ORTHO05D010927 5.7e-08 62.8 41 63.4
Potri.005G021500 Populus trichocarpa HOM05D015247 ORTHO05D010927 5.7e-08 62.8 89 38.2
Sabra05G0027500 Salix brachista HOM05D015247 ORTHO05D010927 5.7e-08 62.8 291 28.9
Lalb_Chr02g0148001 Lupinus albus HOM05D014479 ORTHO05D010927 7.5e-08 62.4 68 42.6
BraA09t36196Z Brassica rapa HOM05D012757 ORTHO05D010927 9.8e-08 62.0 39 59.0
Lsat_1_v5_gn_9_124561 Lactuca sativa HOM05D010455 ORTHO05D010927 9.8e-08 62.0 70 50.0
Solyc01g100070.3 Solanum lycopersicum HOM05D010455 ORTHO05D010927 9.8e-08 62.0 34 67.6
PGSC0003DMG400024774 Solanum tuberosum HOM05D010455 ORTHO05D010927 9.8e-08 62.0 34 67.6
CSS0003559 Camellia sinensis var. sinensis HOM05D010455 ORTHO05D010927 1.3e-07 61.6 35 68.6
CSS0040289 Camellia sinensis var. sinensis HOM05D010455 ORTHO05D010927 1.3e-07 61.6 35 68.6
Carub.0006s2524 Capsella rubella HOM05D012757 ORTHO05D010927 2.8e-07 60.5 88 37.5
Peaxi162Scf00037g00185 Petunia axillaris HOM05D010455 ORTHO05D010927 2.8e-07 60.5 38 57.9
Actinidia19768 Actinidia chinensis HOM05D010455 ORTHO05D010927 3.7e-07 60.1 112 40.2
Sopen01g043600 Solanum pennellii HOM05D010455 ORTHO05D010927 3.7e-07 60.1 40 60.0
BcaC04g23659 Brassica carinata HOM05D012757 ORTHO05D010927 4.8e-07 59.7 86 37.2
C09p06040 Brassica napus HOM05D012757 ORTHO05D010927 4.8e-07 59.7 86 37.2
BolC9t53529H Brassica oleracea HOM05D012757 ORTHO05D010927 4.8e-07 59.7 86 37.2
THA.LOC104802786 Tarenaya hassleriana HOM05D012757 ORTHO05D010927 4.8e-07 59.7 86 36.0
CARHR186470 Cardamine hirsuta HOM05D012757 ORTHO05D010927 8.3e-07 58.9 35 60.0
Dinv30847 Davidia involucrata HOM05D015247 ORTHO05D010927 8.3e-07 58.9 124 31.5
Thhalv10005673m.g Eutrema salsugineum HOM05D012757 ORTHO05D010927 1.1e-06 58.5 78 41.0
AT5G27020 Arabidopsis thaliana HOM05D012757 ORTHO05D010927 4.1e-06 56.6 94 36.2
Carub.0006s2463 Capsella rubella HOM05D012757 ORTHO05D010927 4.1e-06 56.6 78 34.6
Ah.06g190030 Amaranthus hybridus HOM05D031177 ORTHO05D026471 7.0e-06 55.8 71 42.3


User provided reference genes

Program Settings