Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib170G0945 Durio zibethinus HOM05D006227 ORTHO05D007714 1.7e-60 235.7 114 100.0
Duzib170G0407 Durio zibethinus HOM05D006227 ORTHO05D007714 7.1e-38 160.6 78 92.3
Duzib168G0197 Durio zibethinus HOM05D006227 ORTHO05D007714 6.6e-36 154.1 78 87.2
Gohir.A09G092200 Gossypium hirsutum HOM05D006227 ORTHO05D007714 2.0e-32 142.5 77 79.2
Gohir.D09G092300 Gossypium hirsutum HOM05D006227 ORTHO05D007714 2.0e-32 142.5 77 79.2
Gorai.006G108900 Gossypium raimondii HOM05D006227 ORTHO05D007714 2.0e-32 142.5 77 79.2
Gohir.A03G000008 Gossypium hirsutum HOM05D006227 ORTHO05D007714 2.6e-32 142.1 77 79.2
Gohir.A04G148400 Gossypium hirsutum HOM05D006227 ORTHO05D007714 2.6e-32 142.1 77 79.2
Thecc.09G292900 Theobroma cacao HOM05D006227 ORTHO05D007714 2.6e-32 142.1 78 80.8
Gorai.006G108700 Gossypium raimondii HOM05D006227 ORTHO05D007714 7.6e-32 140.6 77 77.9
Gohir.D09G092100 Gossypium hirsutum HOM05D006227 ORTHO05D007714 6.4e-31 137.5 75 80.0
Gohir.A08G253700 Gossypium hirsutum HOM05D006227 ORTHO05D007714 1.2e-29 133.3 77 75.3
Gohir.A10G243300 Gossypium hirsutum HOM05D006227 ORTHO05D007714 6.0e-29 131.0 77 72.7
Prupe.6G117700 Prunus persica HOM05D006227 ORTHO05D007714 9.6e-27 123.6 78 69.2
CiPaw.13G141700 Carya illinoinensis HOM05D006227 ORTHO05D007714 2.8e-26 122.1 78 69.2
RcHm_v2.0_Chr5g0055601 Rosa chinensis HOM05D006227 ORTHO05D007714 2.8e-26 122.1 78 67.9
Lj4g0025300 Lotus japonicus HOM05D006227 ORTHO05D007714 6.2e-26 120.9 90 61.1
Manes.11G155900 Manihot esculenta HOM05D006227 ORTHO05D007714 6.2e-26 120.9 78 67.9
Ciclev10029628m.g Citrus clementina HOM05D006227 ORTHO05D007714 8.1e-26 120.6 78 69.2
Hma1.2p1_0051F.1_g029840 Hydrangea macrophylla HOM05D006227 ORTHO05D007714 8.1e-26 120.6 78 67.9
Sed0008116 Sechium edule HOM05D006227 ORTHO05D007714 8.1e-26 120.6 78 67.9
MELO3C004803.2 Cucumis melo HOM05D006227 ORTHO05D007714 1.1e-25 120.2 75 69.3
CsaV3_1G014480 Cucumis sativus L. HOM05D006227 ORTHO05D007714 1.4e-25 119.8 75 69.3
GSVIVG01023006001 Vitis vinifera HOM05D006227 ORTHO05D007714 4.0e-25 118.2 78 66.7
TAR623G1401 Trochodendron aralioides HOM05D006227 ORTHO05D007714 5.2e-25 117.9 79 63.3
Eucgr.J00418 Eucalyptus grandis HOM05D006227 ORTHO05D007714 8.9e-25 117.1 78 66.7
CSS0048767 Camellia sinensis var. sinensis HOM05D006227 ORTHO05D007714 1.2e-24 116.7 78 66.7
MSTRG.21069 Avicennia marina HOM05D006227 ORTHO05D007714 1.5e-24 116.3 78 62.8
Peaxi162Scf00428g01022 Petunia axillaris HOM05D006227 ORTHO05D007714 1.5e-24 116.3 76 65.8
Psat7g105560 Pisum sativum HOM05D006227 ORTHO05D007714 1.5e-24 116.3 74 66.2
QL01p013949 Quercus lobata HOM05D006227 ORTHO05D007714 1.5e-24 116.3 76 64.5
Rhsim01G0209000 Rhododendron simsii HOM05D006227 ORTHO05D007714 1.5e-24 116.3 79 67.1
ECA238G2178 Erigeron canadensis HOM05D006227 ORTHO05D007714 2.0e-24 115.9 76 67.1
Nitab4.5_0001542g0090 Nicotiana tabacum HOM05D006227 ORTHO05D007714 2.0e-24 115.9 81 60.5
Actinidia07213 Actinidia chinensis HOM05D006227 ORTHO05D007714 2.6e-24 115.5 78 65.4
Nitab4.5_0006850g0030 Nicotiana tabacum HOM05D006227 ORTHO05D007714 3.4e-24 115.2 76 65.8
Psat7g105760 Pisum sativum HOM05D006227 ORTHO05D007714 3.4e-24 115.2 74 66.2
HanXRQChr07g0197671 Helianthus annuus HOM05D006227 ORTHO05D007714 4.4e-24 114.8 76 65.8
AUR62036497 Chenopodium quinoa HOM05D006227 ORTHO05D007714 5.8e-24 114.4 78 64.1
AUR62037073 Chenopodium quinoa HOM05D006227 ORTHO05D007714 5.8e-24 114.4 78 64.1
Ca_18451_v3 Cicer arietinum L. HOM05D006227 ORTHO05D007714 5.8e-24 114.4 74 67.6
Dinv29415 Davidia involucrata HOM05D006227 ORTHO05D007714 5.8e-24 114.4 77 63.6
MD14G1038500 Malus domestica HOM05D006227 ORTHO05D007714 5.8e-24 114.4 78 64.1
Oeu050173.1 Olea europaea HOM05D006227 ORTHO05D007714 5.8e-24 114.4 78 65.4
Lalb_Chr09g0327121 Lupinus albus HOM05D006227 ORTHO05D007714 7.6e-24 114.0 77 64.9
Nitab4.5_0002781g0010 Nicotiana tabacum HOM05D006227 ORTHO05D007714 7.6e-24 114.0 76 64.5
TWI56G0405 Tripterygium wilfordii HOM05D006227 ORTHO05D007714 7.6e-24 114.0 78 65.4
ATR0712G069 Amborella trichopoda HOM05D006227 ORTHO05D007714 9.9e-24 113.6 78 61.5
Potri.004G189300 Populus trichocarpa HOM05D006227 ORTHO05D007714 1.3e-23 113.2 76 65.8
CSS0049374 Camellia sinensis var. sinensis HOM05D006227 ORTHO05D007714 1.7e-23 112.8 78 64.1
AUR62023956 Chenopodium quinoa HOM05D006227 ORTHO05D007714 1.7e-23 112.8 74 67.6
ClCG01G012780 Citrullus lanatus HOM05D006227 ORTHO05D007714 1.7e-23 112.8 78 62.8
DCAR_018745 Daucus carota HOM05D006227 ORTHO05D007714 1.7e-23 112.8 78 65.4
TPR.G13925 Trifolium pratense HOM05D006227 ORTHO05D007714 1.7e-23 112.8 74 66.2
VMungo0251G3527 Vigna mungo HOM05D006227 ORTHO05D007714 1.7e-23 112.8 78 65.4
Cc01_g09910 Coffea canephora HOM05D006227 ORTHO05D007714 2.2e-23 112.5 78 62.8
Phvul.002G218500 Phaseolus vulgaris HOM05D006227 ORTHO05D007714 2.2e-23 112.5 78 65.4
CANSAT54G1955 Cannabis sativa HOM05D006227 ORTHO05D007714 2.9e-23 112.1 78 64.1
CDE02G3751 Ceratophyllum demersum HOM05D006227 ORTHO05D007714 2.9e-23 112.1 80 57.5
SGA_v2.0_scaffold45G17093 Striga asiatica HOM05D006227 ORTHO05D007714 2.9e-23 112.1 78 60.3
Sc06g0007110 Simmondsia chinensis HOM05D006227 ORTHO05D007714 3.8e-23 111.7 77 63.6
Dinv12530 Davidia involucrata HOM05D006227 ORTHO05D007714 4.9e-23 111.3 78 64.1
Glyma.07G187100 Glycine max HOM05D006227 ORTHO05D007714 4.9e-23 111.3 79 62.0
arahy.Tifrunner.gnm1.ann1.U4LPMY Arachis hypogaea HOM05D006227 ORTHO05D007714 8.4e-23 110.5 76 64.5
Migut.D02328 Erythranthe guttata HOM05D006227 ORTHO05D007714 8.4e-23 110.5 78 60.3
EL10Ac9g21059 Beta vulgaris HOM05D006227 ORTHO05D007714 1.1e-22 110.2 78 61.5
Atru.chr3.3392 Acer truncatum HOM05D006227 ORTHO05D007714 1.4e-22 109.8 78 64.1
vmacro14378 Vaccinium macrocarpon HOM05D006227 ORTHO05D007714 1.4e-22 109.8 78 64.1
Aqoxy2G01473 Aquilegia oxysepala HOM05D006227 ORTHO05D007714 1.9e-22 109.4 72 66.7
Sc12g0004090 Simmondsia chinensis HOM05D006227 ORTHO05D007714 3.2e-22 108.6 75 61.3
CAN.G170.132 Capsicum annuum HOM05D006227 ORTHO05D007714 4.2e-22 108.2 76 60.5
DCAR_015484 Daucus carota HOM05D006227 ORTHO05D007714 4.2e-22 108.2 78 59.0
Solyc01g086860.3 Solanum lycopersicum HOM05D006227 ORTHO05D007714 4.2e-22 108.2 76 60.5
Sopen01g033870 Solanum pennellii HOM05D006227 ORTHO05D007714 4.2e-22 108.2 76 60.5
THA.LOC104799532 Tarenaya hassleriana HOM05D006227 ORTHO05D007714 7.1e-22 107.5 75 61.3
MSTRG.18723 Avicennia marina HOM05D006227 ORTHO05D007714 9.3e-22 107.1 78 59.0
Hund07714 Selenicereus undatus HOM05D006227 ORTHO05D007714 1.2e-21 106.7 81 60.5
PSO339G0999 Papaver somniferum HOM05D006227 ORTHO05D007714 1.6e-21 106.3 80 56.2
Solyc01g112370.3 Solanum lycopersicum HOM05D006227 ORTHO05D007714 1.6e-21 106.3 76 60.5
FAN11G2712 Fragaria x ananassa HOM05D006227 ORTHO05D007714 2.7e-21 105.5 68 67.6
SalBow5G0633 Salvia bowleyana HOM05D006227 ORTHO05D007714 4.6e-21 104.8 76 55.3
SalBow5G1351 Salvia bowleyana HOM05D006227 ORTHO05D007714 4.6e-21 104.8 76 55.3
FvH4_3g30110 Fragaria vesca HOM05D006227 ORTHO05D007714 6.0e-21 104.4 68 66.2
arahy.Tifrunner.gnm1.ann1.ME5340 Arachis hypogaea HOM05D006227 ORTHO05D007714 1.3e-20 103.2 85 57.6
Medtr3g014200 Medicago truncatula HOM05D006227 ORTHO05D007714 1.3e-20 103.2 79 59.5
Medtr4g092090 Medicago truncatula HOM05D006227 ORTHO05D007714 1.7e-20 102.8 79 59.5
PGSC0003DMG400025251 Solanum tuberosum HOM05D006227 ORTHO05D007714 1.7e-20 102.8 79 58.2
C01p20840 Brassica napus HOM05D006227 ORTHO05D007714 2.3e-20 102.4 77 59.7
unitig_899.g15369 Utricularia gibba HOM05D006227 ORTHO05D007714 1.9e-19 99.4 73 57.5
A01p16610 Brassica napus HOM05D006227 ORTHO05D007714 5.6e-19 97.8 77 57.1
BraA01t01616Z Brassica rapa HOM05D006227 ORTHO05D007714 5.6e-19 97.8 77 57.1
HPP92_003486 Vanilla planifolia HOM05D006227 ORTHO05D007714 5.6e-19 97.8 75 56.0
HPP92_026884 Vanilla planifolia HOM05D006227 ORTHO05D007714 5.6e-19 97.8 75 56.0
AL7G27820 Arabidopsis lyrata HOM05D006227 ORTHO05D007714 9.6e-19 97.1 81 54.3
FAN16G3386 Fragaria x ananassa HOM05D006227 ORTHO05D007714 1.3e-18 96.7 77 58.4
BraA03t14660Z Brassica rapa HOM05D006227 ORTHO05D007714 1.6e-18 96.3 77 57.1
MBI01_g43174_MAGBIO Magnolia biondii HOM05D006227 ORTHO05D007714 2.8e-18 95.5 74 59.5
BcaNung06163 Brassica carinata HOM05D006227 ORTHO05D007714 3.6e-18 95.1 77 55.8
A03p55890 Brassica napus HOM05D006227 ORTHO05D007714 3.6e-18 95.1 77 55.8
Thhalv10026551m.g Eutrema salsugineum HOM05D006227 ORTHO05D007714 3.6e-18 95.1 77 57.1
Pp3c23_15340 Physcomitrium patens HOM05D006227 ORTHO05D007714 6.2e-18 94.4 75 52.0
Os09g0516800 Oryza sativa ssp. japonica HOM05D006227 ORTHO05D007714 8.1e-18 94.0 73 52.1
BolC7t45904H Brassica oleracea HOM05D006227 ORTHO05D007714 1.8e-17 92.8 81 50.6
SEGI_33746 Sequoiadendron giganteum HOM05D006227 ORTHO05D007714 2.4e-17 92.4 78 48.7
CARHR232720 Cardamine hirsuta HOM05D006227 ORTHO05D007714 3.1e-17 92.0 77 51.9
Sp7g23330 Schrenkiella parvula HOM05D006227 ORTHO05D007714 5.3e-17 91.3 77 53.2
AT4G25315 Arabidopsis thaliana HOM05D006227 ORTHO05D007714 6.9e-17 90.9 77 53.2
AagrBONN_evm.TU.Sc2ySwM_228.5102 Anthoceros agrestis HOM05D006227 ORTHO05D007714 9.0e-17 90.5 75 45.3
C07p54180 Brassica napus HOM05D006227 ORTHO05D007714 9.0e-17 90.5 77 50.6
Oeu023727.1 Olea europaea HOM05D006227 ORTHO05D007714 1.2e-16 90.1 73 56.2
Carub.0008s1058 Capsella rubella HOM05D006227 ORTHO05D007714 2.0e-16 89.4 77 51.9
BcaC06g32822 Brassica carinata HOM05D006227 ORTHO05D007714 3.4e-16 88.6 77 50.6
Zm00001eb314390 Zea mays HOM05D006227 ORTHO05D007714 3.4e-16 88.6 72 51.4
Aa31sc16G160 Aethionema arabicum HOM05D006227 ORTHO05D007714 4.5e-16 88.2 80 48.8
Carub.0007s1570 Capsella rubella HOM05D006227 ORTHO05D007714 4.5e-16 88.2 77 51.9
Mapoly0046s0116 Marchantia polymorpha HOM05D006227 ORTHO05D007714 9.9e-16 87.0 75 45.3
Nn6g35079 Nelumbo nucifera HOM05D006227 ORTHO05D007714 2.8e-10 68.9 40 70.0
CSS0004675 Camellia sinensis var. sinensis HOM05D006227 ORTHO05D007714 4.8e-10 68.2 42 66.7
MD03G1133000 Malus domestica HOM05D006227 ORTHO05D007714 4.8e-10 68.2 41 68.3
Lsat_1_v5_gn_2_96480 Lactuca sativa HOM05D006227 ORTHO05D007714 1.1e-09 67.0 53 56.6
BolC1t02011H Brassica oleracea HOM05D006227 ORTHO05D007714 1.4e-09 66.6 77 42.9
PGR119G0591 Punica granatum HOM05D006227 ORTHO05D007714 5.8e-08 61.2 40 62.5
Lalb_Chr16g0383271 Lupinus albus HOM05D006227 ORTHO05D007714 7.6e-08 60.8 37 67.6
MCO03G239 Micromonas commoda HOM05D006227 ORTHO05D007714 2.2e-07 59.3 75 36.0
Manes.04G009950 Manihot esculenta HOM05D006227 ORTHO05D007714 2.4e-06 55.8 40 60.0


User provided reference genes

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