Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib170G0905 Durio zibethinus HOM05D002303 ORTHO05D007639 3.1e-136 488.4 237 100.0
Thecc.07G058600 Theobroma cacao HOM05D002303 ORTHO05D007639 6.0e-39 165.2 274 40.9
Gorai.002G079300 Gossypium raimondii HOM05D002303 ORTHO05D007639 5.0e-38 162.2 264 42.4
Gohir.D01G058500 Gossypium hirsutum HOM05D002303 ORTHO05D007639 1.5e-37 160.6 264 42.0
Duzib268G0512 Durio zibethinus HOM05D002303 ORTHO05D007639 4.3e-37 159.1 274 40.9
COL.COLO4_09527 Corchorus olitorius HOM05D002303 ORTHO05D007639 5.6e-37 158.7 264 39.8
Dinv02835 Davidia involucrata HOM05D002303 ORTHO05D007639 6.2e-36 155.2 262 40.8
RhsimUnG0255200 Rhododendron simsii HOM05D002303 ORTHO05D007639 6.2e-36 155.2 260 40.0
Ciclev10008307m.g Citrus clementina HOM05D002303 ORTHO05D007639 8.0e-36 154.8 262 39.3
CSS0024301 Camellia sinensis var. sinensis HOM05D002303 ORTHO05D007639 1.5e-34 150.6 262 38.9
arahy.Tifrunner.gnm1.ann1.JSHU92 Arachis hypogaea HOM05D002303 ORTHO05D007639 2.0e-34 150.2 265 36.6
Cfa020474 Carpinus fangiana HOM05D002303 ORTHO05D007639 2.0e-34 150.2 266 39.1
vmacro09591 Vaccinium macrocarpon HOM05D002303 ORTHO05D007639 2.0e-34 150.2 268 38.8
Actinidia28700 Actinidia chinensis HOM05D002303 ORTHO05D007639 4.4e-34 149.1 247 40.1
TWI38G2363 Tripterygium wilfordii HOM05D002303 ORTHO05D007639 4.4e-34 149.1 262 37.8
Lj3g0023309 Lotus japonicus HOM05D002303 ORTHO05D007639 9.8e-34 147.9 262 37.0
MD03G1215900 Malus domestica HOM05D002303 ORTHO05D007639 9.8e-34 147.9 262 39.3
Manes.15G080400 Manihot esculenta HOM05D002303 ORTHO05D007639 9.8e-34 147.9 251 39.4
Psat4g130880 Pisum sativum HOM05D002303 ORTHO05D007639 9.8e-34 147.9 262 37.0
CiPaw.11G180000 Carya illinoinensis HOM05D002303 ORTHO05D007639 1.3e-33 147.5 258 39.1
arahy.Tifrunner.gnm1.ann1.MFBI28 Arachis hypogaea HOM05D002303 ORTHO05D007639 2.2e-33 146.7 265 36.2
Atru.chr2.3118 Acer truncatum HOM05D002303 ORTHO05D007639 2.9e-33 146.4 264 37.9
Atru.chr2.3125 Acer truncatum HOM05D002303 ORTHO05D007639 2.9e-33 146.4 264 37.9
Potri.001G410500 Populus trichocarpa HOM05D002303 ORTHO05D007639 4.9e-33 145.6 262 36.6
GSVIVG01014543001 Vitis vinifera HOM05D002303 ORTHO05D007639 4.9e-33 145.6 251 40.2
Prupe.4G196900 Prunus persica HOM05D002303 ORTHO05D007639 6.4e-33 145.2 262 38.2
Nitab4.5_0002113g0100 Nicotiana tabacum HOM05D002303 ORTHO05D007639 1.9e-32 143.7 268 36.6
Glyma.20G140800 Glycine max HOM05D002303 ORTHO05D007639 2.1e-31 140.2 262 35.9
Medtr8g467040 Medicago truncatula HOM05D002303 ORTHO05D007639 2.7e-31 139.8 262 35.1
Nitab4.5_0007261g0030 Nicotiana tabacum HOM05D002303 ORTHO05D007639 3.5e-31 139.4 268 35.8
Lalb_Chr01g0006291 Lupinus albus HOM05D002303 ORTHO05D007639 4.6e-31 139.0 263 36.1
Peaxi162Scf00760g00026 Petunia axillaris HOM05D002303 ORTHO05D007639 4.6e-31 139.0 270 35.6
Phvul.011G153301 Phaseolus vulgaris HOM05D002303 ORTHO05D007639 1.0e-30 137.9 271 35.1
Lj1A860T39 Lonicera japonica HOM05D002303 ORTHO05D007639 1.3e-30 137.5 262 36.3
RcHm_v2.0_Chr5g0036881 Rosa chinensis HOM05D002303 ORTHO05D007639 2.3e-30 136.7 262 35.5
Cc05_g12930 Coffea canephora HOM05D002303 ORTHO05D007639 5.1e-30 135.6 264 37.1
FvH4_3g21450 Fragaria vesca HOM05D002303 ORTHO05D007639 6.6e-30 135.2 256 36.7
DCAR_008699 Daucus carota HOM05D002303 ORTHO05D007639 8.6e-30 134.8 258 34.9
FAN11G3805 Fragaria x ananassa HOM05D002303 ORTHO05D007639 1.1e-29 134.4 256 36.7
MELO3C016614.2 Cucumis melo HOM05D002303 ORTHO05D007639 2.5e-29 133.3 251 37.8
FAN21G1165 Fragaria x ananassa HOM05D002303 ORTHO05D007639 3.3e-29 132.9 256 35.9
VMungo1127G1472 Vigna mungo HOM05D002303 ORTHO05D007639 3.3e-29 132.9 260 35.8
PGR083G0747 Punica granatum HOM05D002303 ORTHO05D007639 1.2e-28 131.0 247 36.0
CsaV3_3G005620 Cucumis sativus L. HOM05D002303 ORTHO05D007639 1.6e-28 130.6 265 36.2
Eucgr.F03385 Eucalyptus grandis HOM05D002303 ORTHO05D007639 1.6e-28 130.6 255 38.0
MBI02_g37283_MAGBIO Magnolia biondii HOM05D002303 ORTHO05D007639 1.6e-28 130.6 254 39.0
ECA246G5178 Erigeron canadensis HOM05D002303 ORTHO05D007639 4.7e-28 129.0 260 33.8
Sed0022141 Sechium edule HOM05D002303 ORTHO05D007639 4.7e-28 129.0 249 37.8
PSO210G2368 Papaver somniferum HOM05D002303 ORTHO05D007639 1.1e-27 127.9 268 33.6
Lsat_1_v5_gn_8_163300 Lactuca sativa HOM05D002303 ORTHO05D007639 3.1e-27 126.3 247 36.8
ClCG10G006020 Citrullus lanatus HOM05D002303 ORTHO05D007639 8.9e-27 124.8 253 36.0
Sabra16G0276300 Salix brachista HOM05D002303 ORTHO05D007639 1.2e-26 124.4 334 31.7
MSTRG.6872 Avicennia marina HOM05D002303 ORTHO05D007639 1.5e-26 124.0 261 36.8
Sc03g0009470 Simmondsia chinensis HOM05D002303 ORTHO05D007639 1.5e-26 124.0 253 37.9
Migut.M01837 Erythranthe guttata HOM05D002303 ORTHO05D007639 2.6e-26 123.2 272 34.2
SGA_v2.0_scaffold495G52459 Striga asiatica HOM05D002303 ORTHO05D007639 2.6e-26 123.2 272 33.1
SalBow4G1991 Salvia bowleyana HOM05D002303 ORTHO05D007639 3.4e-26 122.9 271 34.3
Aa31LG3G10470 Aethionema arabicum HOM05D002303 ORTHO05D007639 4.4e-26 122.5 274 33.9
Lsat_1_v5_gn_5_5021 Lactuca sativa HOM05D002303 ORTHO05D007639 4.4e-26 122.5 230 38.3
HanXRQChr05g0158911 Helianthus annuus HOM05D002303 ORTHO05D007639 7.6e-26 121.7 251 35.9
Sabra16G0280700 Salix brachista HOM05D002303 ORTHO05D007639 9.9e-26 121.3 342 31.0
Aqoxy1G03964 Aquilegia oxysepala HOM05D002303 ORTHO05D007639 1.7e-25 120.6 249 36.5
Thhalv10013494m.g Eutrema salsugineum HOM05D002303 ORTHO05D007639 6.4e-25 118.6 272 32.7
CARHR267800 Cardamine hirsuta HOM05D002303 ORTHO05D007639 8.3e-25 118.2 263 31.9
AT5G54520 Arabidopsis thaliana HOM05D002303 ORTHO05D007639 1.4e-24 117.5 264 32.2
AUR62041151 Chenopodium quinoa HOM05D002303 ORTHO05D007639 1.9e-24 117.1 264 33.0
Ah.04g165230 Amaranthus hybridus HOM05D002303 ORTHO05D007639 2.4e-24 116.7 264 33.3
BcaB01g04298 Brassica carinata HOM05D002303 ORTHO05D007639 2.4e-24 116.7 272 31.6
AUR62029278 Chenopodium quinoa HOM05D002303 ORTHO05D007639 2.4e-24 116.7 264 33.3
Sp6g16490 Schrenkiella parvula HOM05D002303 ORTHO05D007639 3.2e-24 116.3 272 32.0
THA.LOC104809285 Tarenaya hassleriana HOM05D002303 ORTHO05D007639 5.4e-24 115.5 267 33.3
BcaC01g06311 Brassica carinata HOM05D002303 ORTHO05D007639 7.1e-24 115.2 272 31.6
ATR0804G071 Amborella trichopoda HOM05D002303 ORTHO05D007639 1.2e-23 114.4 264 32.2
FAN25G1148 Fragaria x ananassa HOM05D002303 ORTHO05D007639 1.2e-23 114.4 245 33.1
unitig_8.g3262 Utricularia gibba HOM05D002303 ORTHO05D007639 2.1e-23 113.6 264 32.2
A03p14600 Brassica napus HOM05D002303 ORTHO05D007639 3.5e-23 112.8 265 32.1
BolC3t14116H Brassica oleracea HOM05D002303 ORTHO05D007639 3.5e-23 112.8 271 31.4
BraA03t10750Z Brassica rapa HOM05D002303 ORTHO05D007639 4.6e-23 112.5 265 31.7
Sed0007456 Sechium edule HOM05D002303 ORTHO05D007639 4.6e-23 112.5 226 38.1
Gohir.A01G071600 Gossypium hirsutum HOM05D002303 ORTHO05D007639 6.0e-23 112.1 120 52.5
C03p17060 Brassica napus HOM05D002303 ORTHO05D007639 7.8e-23 111.7 272 30.9
Carub.0008s1480 Capsella rubella HOM05D002303 ORTHO05D007639 3.0e-22 109.8 247 33.2
AL8G29890 Arabidopsis lyrata HOM05D002303 ORTHO05D007639 3.9e-22 109.4 262 30.2
TPR.G10028 Trifolium pratense HOM05D002303 ORTHO05D007639 2.5e-21 106.7 154 42.2
BcaB01g04312 Brassica carinata HOM05D002303 ORTHO05D007639 4.3e-21 105.9 251 32.3
QL08p014652 Quercus lobata HOM05D002303 ORTHO05D007639 5.6e-21 105.5 120 48.3
Sopen04g004480 Solanum pennellii HOM05D002303 ORTHO05D007639 7.3e-21 105.1 216 34.7
PGSC0003DMG400032540 Solanum tuberosum HOM05D002303 ORTHO05D007639 9.6e-21 104.8 216 34.3
SEGI_10698 Sequoiadendron giganteum HOM05D002303 ORTHO05D007639 1.2e-20 104.4 260 30.4
Solyc04g009360.3 Solanum lycopersicum HOM05D002303 ORTHO05D007639 1.2e-20 104.4 207 36.2
Ca_22984_v3 Cicer arietinum L. HOM05D002303 ORTHO05D007639 4.7e-20 102.4 171 38.6
Zm00001eb118470 Zea mays HOM05D002303 ORTHO05D007639 4.7e-20 102.4 248 31.9
Zm00001eb164250 Zea mays HOM05D002303 ORTHO05D007639 4.7e-20 102.4 248 31.9
HPP92_022654 Vanilla planifolia HOM05D002303 ORTHO05D007639 8.1e-20 101.7 238 31.9
Oeu052326.1 Olea europaea HOM05D002303 ORTHO05D007639 1.1e-19 101.3 120 46.7
FAN16G0687 Fragaria x ananassa HOM05D002303 ORTHO05D007639 3.1e-19 99.8 271 29.9
ECA236G1149 Erigeron canadensis HOM05D000037 ORTHO05D000419 5.2e-19 99.0 212 34.9
Haze_09569 Corylus avellana HOM05D002303 ORTHO05D007639 6.8e-19 98.6 187 39.0
Actinidia35299 Actinidia chinensis HOM05D002303 ORTHO05D007639 1.2e-18 97.8 114 48.2
Nn1g03778 Nelumbo nucifera HOM05D002303 ORTHO05D007639 1.5e-18 97.4 112 50.9
TAR624G0310 Trochodendron aralioides HOM05D002303 ORTHO05D007639 4.4e-18 95.9 109 49.5
Actinidia35293 Actinidia chinensis HOM05D002303 ORTHO05D007639 9.9e-18 94.7 253 30.4
AagrBONN_evm.TU.Sc2ySwM_228.1852 Anthoceros agrestis HOM05D002303 ORTHO05D007639 1.0e-14 84.7 245 30.6
Hund23363 Selenicereus undatus HOM05D002303 ORTHO05D007639 6.6e-14 82.0 120 40.0
Pp3c11_840 Physcomitrium patens HOM05D002303 ORTHO05D007639 4.3e-13 79.3 247 29.6
Os02g0319800 Oryza sativa ssp. japonica HOM05D002303 ORTHO05D007639 8.1e-12 75.1 245 30.2
Mapoly0024s0099 Marchantia polymorpha HOM05D002303 ORTHO05D007639 1.4e-11 74.3 264 26.5
QL08p014647 Quercus lobata HOM05D002303 ORTHO05D007639 1.4e-11 74.3 51 66.7
Actinidia18732 Actinidia chinensis HOM05D002303 ORTHO05D007639 6.9e-11 72.0 227 27.8
Cpa.g.sc1065.1 Carica papaya HOM05D002303 ORTHO05D007639 5.8e-10 68.9 49 63.3
Ca_22986_v3 Cicer arietinum L. HOM05D002303 ORTHO05D007639 9.9e-10 68.2 49 61.2
Glyma.06G260700 Glycine max HOM05D002303 ORTHO05D007639 1.3e-09 67.8 74 48.6
Atru.chr2.3293 Acer truncatum HOM05D002303 ORTHO05D007639 1.7e-09 67.4 101 39.6
Glyma.12G141100 Glycine max HOM05D002303 ORTHO05D007639 8.4e-09 65.1 99 37.4
TPR.G10031 Trifolium pratense HOM05D002303 ORTHO05D007639 1.4e-08 64.3 48 58.3
Glyma.12G141050 Glycine max HOM05D002303 ORTHO05D007639 1.9e-08 63.9 49 59.2


User provided reference genes

Program Settings