Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib170G0139 Durio zibethinus HOM05D005607 ORTHO05D008142 2.8e-247 858.2 449 100.0
Thecc.07G096400 Theobroma cacao HOM05D005607 ORTHO05D008142 1.3e-207 726.5 525 76.0
Gohir.D05G347700 Gossypium hirsutum HOM05D005607 ORTHO05D008142 2.0e-197 692.6 525 72.4
Gohir.A04G035700 Gossypium hirsutum HOM05D005607 ORTHO05D008142 5.9e-197 691.0 527 71.9
COL.COLO4_36717 Corchorus olitorius HOM05D005607 ORTHO05D008142 1.3e-196 689.9 526 71.3
Gorai.009G375500 Gossypium raimondii HOM05D005607 ORTHO05D008142 2.9e-196 688.7 525 72.0
Duzib213G0871 Durio zibethinus HOM05D005607 ORTHO05D008142 1.5e-187 659.8 496 73.0
Dinv20204 Davidia involucrata HOM05D005607 ORTHO05D008142 1.1e-171 607.1 503 67.0
TWI38G0301 Tripterygium wilfordii HOM05D005607 ORTHO05D008142 2.6e-168 595.9 527 63.0
CSS0008326 Camellia sinensis var. sinensis HOM05D005607 ORTHO05D008142 1.3e-167 593.6 527 63.4
GSVIVG01014288001 Vitis vinifera HOM05D005607 ORTHO05D008142 3.9e-164 582.0 525 62.1
Ciclev10007885m.g Citrus clementina HOM05D005607 ORTHO05D008142 6.6e-164 581.3 528 61.7
Eucgr.F01169 Eucalyptus grandis HOM05D005607 ORTHO05D008142 2.1e-162 576.2 527 62.0
CiPaw.11G167700 Carya illinoinensis HOM05D005607 ORTHO05D008142 2.8e-162 575.9 527 61.7
Cfa020607 Carpinus fangiana HOM05D005607 ORTHO05D008142 6.2e-162 574.7 526 61.2
RcHm_v2.0_Chr5g0032701 Rosa chinensis HOM05D005607 ORTHO05D008142 7.1e-158 561.2 526 61.2
Rhsim06G0202700 Rhododendron simsii HOM05D005607 ORTHO05D008142 2.1e-157 559.7 542 59.6
PGR083G1887 Punica granatum HOM05D005607 ORTHO05D008142 4.6e-157 558.5 526 60.5
Cpa.g.sc131.86 Carica papaya HOM05D005607 ORTHO05D008142 7.8e-157 557.8 526 58.6
Potri.001G396500 Populus trichocarpa HOM05D005607 ORTHO05D008142 1.3e-156 557.0 527 60.5
Prupe.4G175900 Prunus persica HOM05D005607 ORTHO05D008142 3.0e-156 555.8 525 60.2
Actinidia31524 Actinidia chinensis HOM05D005607 ORTHO05D008142 6.6e-156 554.7 527 60.9
Atru.chr2.2407 Acer truncatum HOM05D005607 ORTHO05D008142 1.5e-155 553.5 526 60.1
Manes.03G105800 Manihot esculenta HOM05D005607 ORTHO05D008142 7.3e-155 551.2 527 58.6
FvH4_3g19420 Fragaria vesca HOM05D005607 ORTHO05D008142 9.5e-155 550.8 526 59.9
MD03G1232700 Malus domestica HOM05D005607 ORTHO05D008142 2.8e-154 549.3 528 60.2
vmacro11890 Vaccinium macrocarpon HOM05D005607 ORTHO05D008142 8.1e-154 547.7 551 57.9
vmacro23190 Vaccinium macrocarpon HOM05D005607 ORTHO05D008142 8.1e-154 547.7 551 57.9
CsaV3_4G033450 Cucumis sativus L. HOM05D005607 ORTHO05D008142 1.5e-152 543.5 525 57.5
Lj3g0025006 Lotus japonicus HOM05D005607 ORTHO05D008142 2.0e-152 543.1 524 57.1
Sabra16G0259600 Salix brachista HOM05D005607 ORTHO05D008142 5.8e-152 541.6 528 59.3
arahy.Tifrunner.gnm1.ann1.K8QLTQ Arachis hypogaea HOM05D005607 ORTHO05D008142 9.9e-152 540.8 529 57.5
Glyma.06G236100 Glycine max HOM05D005607 ORTHO05D008142 3.8e-151 538.9 526 56.8
MELO3C025610.2 Cucumis melo HOM05D005607 ORTHO05D008142 4.9e-151 538.5 525 56.8
Lalb_Chr19g0134061 Lupinus albus HOM05D005607 ORTHO05D008142 7.1e-150 534.6 525 56.8
ClCG11G017810 Citrullus lanatus HOM05D005607 ORTHO05D008142 1.6e-149 533.5 539 56.4
CSS0003695 Camellia sinensis var. sinensis HOM05D005607 ORTHO05D008142 2.7e-149 532.7 539 58.6
arahy.Tifrunner.gnm1.ann1.3D346W Arachis hypogaea HOM05D005607 ORTHO05D008142 1.0e-148 530.8 530 57.2
Nn1g04204 Nelumbo nucifera HOM05D005607 ORTHO05D008142 1.5e-147 526.9 525 57.5
FAN16G0865 Fragaria x ananassa HOM05D005607 ORTHO05D008142 2.5e-147 526.2 540 57.8
Cc05_g11730 Coffea canephora HOM05D005607 ORTHO05D008142 4.7e-146 521.9 525 57.5
Sed0013999 Sechium edule HOM05D005607 ORTHO05D008142 2.4e-145 519.6 525 55.2
Sopen07g031060 Solanum pennellii HOM05D005607 ORTHO05D008142 3.1e-145 519.2 525 56.0
Nitab4.5_0002330g0110 Nicotiana tabacum HOM05D005607 ORTHO05D008142 9.0e-145 517.7 525 56.2
Haze_09409 Corylus avellana HOM05D005607 ORTHO05D008142 1.2e-144 517.3 571 54.5
Ca_23036_v3 Cicer arietinum L. HOM05D005607 ORTHO05D008142 4.4e-144 515.4 524 55.3
Nitab4.5_0008275g0010 Nicotiana tabacum HOM05D005607 ORTHO05D008142 4.4e-144 515.4 525 55.6
MSTRG.12893 Avicennia marina HOM05D005607 ORTHO05D008142 1.3e-143 513.8 525 56.8
CAN.G162.36 Capsicum annuum HOM05D005607 ORTHO05D008142 6.4e-143 511.5 525 55.6
THA.LOC104815562 Tarenaya hassleriana HOM05D005607 ORTHO05D008142 7.1e-142 508.1 526 55.1
DCAR_017123 Daucus carota HOM05D005607 ORTHO05D008142 1.6e-141 506.9 563 53.8
Medtr8g058790 Medicago truncatula HOM05D005607 ORTHO05D008142 1.7e-140 503.4 531 55.2
Medtr8g061280 Medicago truncatula HOM05D005607 ORTHO05D008142 1.7e-140 503.4 531 55.2
TPR.G28174 Trifolium pratense HOM05D005607 ORTHO05D008142 3.0e-140 502.7 525 54.9
Sc16g0007180 Simmondsia chinensis HOM05D005607 ORTHO05D008142 3.9e-140 502.3 526 53.6
Oeu005401.4 Olea europaea HOM05D005607 ORTHO05D008142 5.1e-140 501.9 643 49.5
HanXRQChr15g0495421 Helianthus annuus HOM05D005607 ORTHO05D008142 3.3e-139 499.2 528 54.9
Lsat_1_v5_gn_7_104480 Lactuca sativa HOM05D005607 ORTHO05D008142 3.3e-139 499.2 529 54.6
CANSAT35G0745 Cannabis sativa HOM05D005607 ORTHO05D008142 7.3e-139 498.0 525 55.2
Eucgr.F01141 Eucalyptus grandis HOM05D005607 ORTHO05D008142 7.3e-139 498.0 526 56.5
PSO210G5410 Papaver somniferum HOM05D005607 ORTHO05D008142 2.1e-138 496.5 524 54.4
ECA236G2999 Erigeron canadensis HOM05D005607 ORTHO05D008142 2.4e-137 493.0 528 53.4
PSO832G0774 Papaver somniferum HOM05D005607 ORTHO05D008142 2.4e-137 493.0 524 54.0
VMungo1127G0827 Vigna mungo HOM05D005607 ORTHO05D008142 3.2e-134 482.6 525 53.7
Eucgr.F00890 Eucalyptus grandis HOM05D005607 ORTHO05D008142 1.0e-132 477.6 526 54.4
MD11G1253400 Malus domestica HOM05D005607 ORTHO05D008142 2.3e-132 476.5 464 59.7
AL3G27570 Arabidopsis lyrata HOM05D005607 ORTHO05D008142 5.1e-132 475.3 520 52.1
AT3G15180 Arabidopsis thaliana HOM05D005607 ORTHO05D008142 6.7e-132 474.9 520 51.9
Carub.0003s1483 Capsella rubella HOM05D005607 ORTHO05D008142 2.5e-131 473.0 520 51.7
EL10Ac4g08241 Beta vulgaris HOM05D005607 ORTHO05D008142 1.1e-129 467.6 504 51.8
Sp3g13390 Schrenkiella parvula HOM05D005607 ORTHO05D008142 1.4e-129 467.2 524 50.4
BraA05t22250Z Brassica rapa HOM05D005607 ORTHO05D008142 1.7e-127 460.3 520 50.6
Thhalv10020515m.g Eutrema salsugineum HOM05D005607 ORTHO05D008142 9.3e-126 454.5 520 50.2
Lj1A839T37 Lonicera japonica HOM05D005607 ORTHO05D008142 2.3e-124 449.9 371 67.4
BolC5t33890H Brassica oleracea HOM05D005607 ORTHO05D008142 3.9e-124 449.1 534 48.9
C05p52050 Brassica napus HOM05D005607 ORTHO05D008142 6.7e-124 448.4 546 48.9
A05p34290 Brassica napus HOM05D005607 ORTHO05D008142 9.6e-123 444.5 500 51.0
CDE10G0361 Ceratophyllum demersum HOM05D005607 ORTHO05D008142 6.2e-122 441.8 527 50.1
Aa31LG8G2380 Aethionema arabicum HOM05D005607 ORTHO05D008142 8.2e-122 441.4 531 49.0
Aqoxy4G00691 Aquilegia oxysepala HOM05D005607 ORTHO05D008142 2.4e-121 439.9 468 55.3
BcaB06g29542 Brassica carinata HOM05D005607 ORTHO05D008142 1.3e-119 434.1 520 49.2
ATR0737G117 Amborella trichopoda HOM05D005607 ORTHO05D008142 2.2e-119 433.3 521 49.7
Ah.06g184600 Amaranthus hybridus HOM05D005607 ORTHO05D008142 1.2e-117 427.6 525 48.0
SGA_v2.0_scaffold130G34350 Striga asiatica HOM05D005607 ORTHO05D008142 3.5e-117 426.0 573 47.3
Lj1A839T35 Lonicera japonica HOM05D005607 ORTHO05D008142 3.2e-110 402.9 363 62.8
Migut.H01958 Erythranthe guttata HOM05D005607 ORTHO05D008142 2.7e-109 399.8 343 63.3
Phvul.011G160300 Phaseolus vulgaris HOM05D005607 ORTHO05D008142 3.6e-109 399.4 366 60.7
Os05g0557200 Oryza sativa ssp. japonica HOM05D005607 ORTHO05D008142 7.4e-107 391.7 514 44.2
Hund02235 Selenicereus undatus HOM05D005607 ORTHO05D008142 8.2e-106 388.3 343 61.5
Zm00001eb295460 Zea mays HOM05D005607 ORTHO05D008142 1.1e-105 387.9 514 44.0
AUR62019473 Chenopodium quinoa HOM05D005607 ORTHO05D008142 3.8e-103 379.4 474 47.5
AUR62036159 Chenopodium quinoa HOM05D005607 ORTHO05D008142 5.5e-102 375.6 444 48.9
Psat7g207160 Pisum sativum HOM05D005607 ORTHO05D008142 8.8e-100 368.2 423 51.8
SalBow7G3213 Salvia bowleyana HOM05D005607 ORTHO05D008142 1.1e-89 334.7 290 62.1
SalBow7G3521 Salvia bowleyana HOM05D005607 ORTHO05D008142 1.1e-89 334.7 290 62.1
unitig_749.g13531 Utricularia gibba HOM05D005607 ORTHO05D008142 5.2e-76 289.3 323 53.6
QL08p023973 Quercus lobata HOM05D005607 ORTHO05D008142 4.4e-75 286.2 195 72.8
Peaxi162Scf00069g01839 Petunia axillaris HOM05D005607 ORTHO05D008142 2.0e-72 277.3 328 51.5
Solyc07g062860.3 Solanum lycopersicum HOM05D005607 ORTHO05D008142 2.0e-72 277.3 336 51.2
MBI06_g04182_MAGBIO Magnolia biondii HOM05D005607 ORTHO05D008142 1.3e-71 274.6 335 52.5
AagrBONN_evm.TU.Sc2ySwM_344.1287 Anthoceros agrestis HOM05D005607 ORTHO05D008142 3.7e-66 256.5 509 34.4
Glyma.12G162201 Glycine max HOM05D005607 ORTHO05D008142 1.1e-57 228.4 164 67.7
SMO139G0024 Selaginella moellendorffii HOM05D005607 ORTHO05D008142 1.1e-57 228.4 521 32.2
Pp3c1_12630 Physcomitrium patens HOM05D005607 ORTHO05D008142 1.9e-57 227.6 534 31.3
SMO145G0057 Selaginella moellendorffii HOM05D005607 ORTHO05D008142 2.3e-52 210.7 435 34.7
Peaxi162Scf00069g01838 Petunia axillaris HOM05D005607 ORTHO05D008142 4.0e-52 209.9 163 64.4
QL08p023962 Quercus lobata HOM05D005607 ORTHO05D008142 1.9e-49 201.1 155 78.1
MD11G1279000 Malus domestica HOM05D005607 ORTHO05D008142 1.4e-41 174.9 177 62.7
FAN11G3919 Fragaria x ananassa HOM05D005607 ORTHO05D008142 4.6e-40 169.9 269 42.0
QL08p023949 Quercus lobata HOM05D005607 ORTHO05D008142 5.1e-39 166.4 112 71.4
CBR_g2884 Chara braunii HOM05D005607 ORTHO05D008142 9.9e-35 152.1 292 37.3
FAN25G1444 Fragaria x ananassa HOM05D005607 ORTHO05D008142 1.7e-34 151.4 103 69.9
PGSC0003DMG400012404 Solanum tuberosum HOM05D005607 ORTHO05D008142 7.1e-33 146.0 103 68.9
SEGI_34734 Sequoiadendron giganteum HOM05D005607 ORTHO05D008142 5.6e-30 136.3 128 56.2
CARHR090160 Cardamine hirsuta HOM05D005607 ORTHO05D008142 2.1e-29 134.4 148 55.4
EL10Ac6g14983 Beta vulgaris HOM05D005607 ORTHO05D008142 1.1e-17 95.5 101 50.5
CBR_g2888 Chara braunii HOM05D000019 ORTHO05D000002 2.9e-10 70.9 74 45.9
HanXRQChr10g0304121 Helianthus annuus HOM05D005607 ORTHO05D008142 1.4e-09 68.6 64 64.1
RcHm_v2.0_Chr1g0340011 Rosa chinensis HOM05D005607 ORTHO05D008142 1.1e-06 58.9 72 51.4
SEGI_12563 Sequoiadendron giganteum HOM05D005607 ORTHO05D008142 1.1e-06 58.9 60 48.3
MELO3C033904.2 Cucumis melo HOM05D005607 ORTHO05D008142 5.7e-06 56.6 45 68.9


User provided reference genes

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