Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib170G0138 Durio zibethinus HOM05D007890 ORTHO05D009945 1.4e-82 309.7 164 100.0
Thecc.09G234600 Theobroma cacao HOM05D007890 ORTHO05D009945 1.6e-46 189.9 160 70.6
Duzib170G0703 Durio zibethinus HOM05D007890 ORTHO05D009945 2.3e-45 186.0 164 68.3
Gohir.D05G072500 Gossypium hirsutum HOM05D007890 ORTHO05D009945 2.4e-39 166.0 139 70.5
Gorai.009G073500 Gossypium raimondii HOM05D007890 ORTHO05D009945 2.4e-39 166.0 167 61.7
Gohir.A05G069600 Gossypium hirsutum HOM05D007890 ORTHO05D009945 9.2e-39 164.1 168 62.5
Potri.001G257400 Populus trichocarpa HOM05D007890 ORTHO05D009945 3.0e-29 132.5 103 66.0
QL01p004625 Quercus lobata HOM05D007890 ORTHO05D009945 5.0e-29 131.7 133 57.1
Manes.13G093240 Manihot esculenta HOM05D007890 ORTHO05D009945 6.6e-29 131.3 158 50.0
Dinv36254 Davidia involucrata HOM05D007890 ORTHO05D009945 2.3e-26 122.9 165 50.3
Ciclev10016956m.g Citrus clementina HOM05D007890 ORTHO05D009945 8.9e-26 120.9 116 56.9
Cfa009778 Carpinus fangiana HOM05D007890 ORTHO05D009945 1.5e-25 120.2 157 50.3
Lalb_Chr15g0082521 Lupinus albus HOM05D007890 ORTHO05D009945 7.5e-25 117.9 103 62.1
GSVIVG01025250001 Vitis vinifera HOM05D007890 ORTHO05D009945 1.3e-24 117.1 139 50.4
TWI32G0791 Tripterygium wilfordii HOM05D007890 ORTHO05D009945 1.7e-24 116.7 145 49.7
Sabra16G0157400 Salix brachista HOM05D007890 ORTHO05D009945 2.2e-24 116.3 140 49.3
CiPaw.13G159700 Carya illinoinensis HOM05D007890 ORTHO05D009945 3.7e-24 115.5 163 47.9
Atru.chr3.2706 Acer truncatum HOM05D007890 ORTHO05D009945 1.1e-23 114.0 175 46.3
TPR.G14719 Trifolium pratense HOM05D005961 ORTHO05D007391 1.1e-23 114.0 110 57.3
TAR633G1231 Trochodendron aralioides HOM05D007890 ORTHO05D009945 1.1e-23 114.0 156 49.4
PGSC0003DMG400033336 Solanum tuberosum HOM05D007890 ORTHO05D009945 1.4e-23 113.6 101 59.4
Eucgr.B03690 Eucalyptus grandis HOM05D007890 ORTHO05D009945 2.4e-23 112.8 112 54.5
ClCG02G023170 Citrullus lanatus HOM05D007890 ORTHO05D009945 3.2e-23 112.5 121 53.7
MD11G1192200 Malus domestica HOM05D007890 ORTHO05D009945 3.2e-23 112.5 138 50.0
Nitab4.5_0002741g0090 Nicotiana tabacum HOM05D007890 ORTHO05D009945 3.2e-23 112.5 115 54.8
Solyc11g065680.1 Solanum lycopersicum HOM05D007890 ORTHO05D009945 3.2e-23 112.5 148 47.3
THA.LOC104801952 Tarenaya hassleriana HOM05D007890 ORTHO05D009945 3.2e-23 112.5 152 47.4
Sopen11g025420 Solanum pennellii HOM05D007890 ORTHO05D009945 4.1e-23 112.1 148 47.3
Hma1.2p1_0606F.1_g188050 Hydrangea macrophylla HOM05D007890 ORTHO05D009945 1.2e-22 110.5 105 59.0
MD03G1174000 Malus domestica HOM05D007890 ORTHO05D009945 1.2e-22 110.5 139 49.6
Peaxi162Scf00004g02526 Petunia axillaris HOM05D007890 ORTHO05D009945 1.2e-22 110.5 117 53.0
Rhsim13G0220700 Rhododendron simsii HOM05D007890 ORTHO05D009945 1.6e-22 110.2 102 59.8
Oeu025872.1 Olea europaea HOM05D007890 ORTHO05D009945 1.3e-21 107.1 107 56.1
MSTRG.17595 Avicennia marina HOM05D007890 ORTHO05D009945 2.3e-21 106.3 106 58.5
Psat5g163960 Pisum sativum HOM05D007890 ORTHO05D009945 2.3e-21 106.3 116 55.2
RcHm_v2.0_Chr5g0052301 Rosa chinensis HOM05D007890 ORTHO05D009945 3.0e-21 105.9 149 47.7
arahy.Tifrunner.gnm1.ann1.I2HDTW Arachis hypogaea HOM05D007890 ORTHO05D009945 6.6e-21 104.8 120 47.5
arahy.Tifrunner.gnm1.ann1.SWS7SX Arachis hypogaea HOM05D007890 ORTHO05D009945 6.6e-21 104.8 120 47.5
Actinidia06910 Actinidia chinensis HOM05D007890 ORTHO05D009945 8.6e-21 104.4 108 55.6
MELO3C014589.2 Cucumis melo HOM05D007890 ORTHO05D009945 1.1e-20 104.0 117 52.1
Lj6g0024098 Lotus japonicus HOM05D007890 ORTHO05D009945 1.1e-20 104.0 109 54.1
Medtr3g061480 Medicago truncatula HOM05D007890 ORTHO05D009945 1.5e-20 103.6 103 51.5
Glyma.08G336100 Glycine max HOM05D007890 ORTHO05D009945 2.5e-20 102.8 105 57.1
EL10Ac4g10243 Beta vulgaris HOM05D007890 ORTHO05D009945 3.3e-20 102.4 111 45.9
SalBow5G2971 Salvia bowleyana HOM05D007890 ORTHO05D009945 3.3e-20 102.4 112 51.8
vmacro04152 Vaccinium macrocarpon HOM05D007890 ORTHO05D009945 3.3e-20 102.4 145 46.9
Ah.06g194130 Amaranthus hybridus HOM05D007890 ORTHO05D009945 2.8e-19 99.4 98 49.0
CsaV3_6G039340 Cucumis sativus L. HOM05D007890 ORTHO05D009945 4.7e-19 98.6 117 50.4
FAN21G3432 Fragaria x ananassa HOM05D007890 ORTHO05D009945 6.2e-19 98.2 116 53.4
FAN16G0819 Fragaria x ananassa HOM05D007890 ORTHO05D009945 1.8e-18 96.7 116 52.6
Lj1P329T66 Lonicera japonica HOM05D007890 ORTHO05D009945 1.8e-18 96.7 97 57.7
FvH4_3g28750 Fragaria vesca HOM05D007890 ORTHO05D009945 5.2e-18 95.1 112 52.7
FAN11G2622 Fragaria x ananassa HOM05D007890 ORTHO05D009945 5.2e-18 95.1 112 52.7
Sed0013757 Sechium edule HOM05D007890 ORTHO05D009945 5.2e-18 95.1 142 43.0
Migut.N02322 Erythranthe guttata HOM05D007890 ORTHO05D009945 7.6e-17 91.3 116 49.1
Aqoxy2G00189 Aquilegia oxysepala HOM05D007890 ORTHO05D009945 2.9e-16 89.4 127 47.2
BcaC06g31267 Brassica carinata HOM05D007890 ORTHO05D009945 4.9e-16 88.6 137 43.1
Cpa.g.sc84.47 Carica papaya HOM05D007890 ORTHO05D009945 8.4e-16 87.8 143 44.1
AL5G10980 Arabidopsis lyrata HOM05D007890 ORTHO05D009945 1.9e-15 86.7 135 43.7
Prupe.4G250100 Prunus persica HOM05D007890 ORTHO05D009945 1.9e-15 86.7 107 47.7
BcaC06g34102 Brassica carinata HOM05D007890 ORTHO05D009945 5.4e-15 85.1 133 42.9
C07p32670 Brassica napus HOM05D001297 ORTHO05D001135 5.4e-15 85.1 133 42.9
MBI02_g09445_MAGBIO Magnolia biondii HOM05D007890 ORTHO05D009945 5.4e-15 85.1 107 48.6
BolC7t43788H Brassica oleracea HOM05D001297 ORTHO05D001135 7.1e-15 84.7 134 42.5
Carub.0005s0083 Capsella rubella HOM05D007890 ORTHO05D009945 7.1e-15 84.7 126 42.1
A06p43960 Brassica napus HOM05D001297 ORTHO05D001135 1.6e-14 83.6 135 41.5
BraA06t27271Z Brassica rapa HOM05D001297 ORTHO05D001135 1.6e-14 83.6 135 41.5
VMungo0540G1907 Vigna mungo HOM05D007890 ORTHO05D009945 4.6e-14 82.0 108 48.1
AT2G01870 Arabidopsis thaliana HOM05D007890 ORTHO05D009945 6.0e-14 81.6 128 41.4
Sp2g13290 Schrenkiella parvula HOM05D007890 ORTHO05D009945 1.3e-13 80.5 131 40.5
HanXRQChr08g0209341 Helianthus annuus HOM05D007890 ORTHO05D009945 1.7e-13 80.1 118 42.4
Phvul.006G062000 Phaseolus vulgaris HOM05D007890 ORTHO05D009945 2.3e-13 79.7 106 47.2
CARHR144430 Cardamine hirsuta HOM05D007890 ORTHO05D009945 3.9e-13 79.0 113 42.5
Lsat_1_v5_gn_2_29200 Lactuca sativa HOM05D007890 ORTHO05D009945 1.9e-12 76.6 98 51.0
PSO423G0105 Papaver somniferum HOM05D007890 ORTHO05D009945 7.3e-12 74.7 108 48.1
PSO724G0038 Papaver somniferum HOM05D007890 ORTHO05D009945 7.3e-12 74.7 108 49.1
Thhalv10005015m.g Eutrema salsugineum HOM05D007890 ORTHO05D009945 1.6e-11 73.6 118 40.7
ECA233G3563 Erigeron canadensis HOM05D000013 ORTHO05D004590 2.8e-11 72.8 97 51.5
unitig_22.g5692 Utricularia gibba HOM05D007890 ORTHO05D009945 3.6e-11 72.4 98 49.0
CDE05G2272 Ceratophyllum demersum HOM05D007890 ORTHO05D009945 2.4e-10 69.7 122 36.9
PGR102G2636 Punica granatum HOM05D007890 ORTHO05D009945 1.5e-09 67.0 144 37.5
Nn2g15343 Nelumbo nucifera HOM05D007890 ORTHO05D009945 2.0e-09 66.6 136 39.7
Aa31LG2G8040 Aethionema arabicum HOM05D007890 ORTHO05D009945 5.8e-09 65.1 127 37.8
Nitab4.5_0001587g0050 Nicotiana tabacum HOM05D007890 ORTHO05D009945 3.8e-08 62.4 79 45.6
CSS0004739 Camellia sinensis var. sinensis HOM05D007890 ORTHO05D009945 5.4e-07 58.5 61 52.5
TAR633G1577 Trochodendron aralioides HOM05D007890 ORTHO05D009945 7.8e-06 54.7 63 44.4


User provided reference genes

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