Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib168G2099 Durio zibethinus HOM05D003803 ORTHO05D004456 3.6e-107 392.1 281 100.0
Duzib150G1133 Durio zibethinus HOM05D003803 ORTHO05D004456 3.5e-70 269.2 316 68.7
Thecc.09G075700 Theobroma cacao HOM05D003803 ORTHO05D004456 4.2e-68 262.3 130 92.3
Gorai.001G015700 Gossypium raimondii HOM05D003803 ORTHO05D004456 6.3e-64 248.4 282 57.8
Gorai.013G223800 Gossypium raimondii HOM05D003803 ORTHO05D004456 9.5e-60 234.6 127 89.0
Gohir.A13G190300 Gossypium hirsutum HOM05D003803 ORTHO05D004456 1.6e-59 233.8 123 90.2
Gohir.D13G196350 Gossypium hirsutum HOM05D003803 ORTHO05D004456 1.6e-59 233.8 378 58.2
Gohir.D07G014900 Gossypium hirsutum HOM05D003803 ORTHO05D004456 2.0e-57 226.9 282 53.9
Potri.006G141100 Populus trichocarpa HOM05D003803 ORTHO05D004456 4.4e-57 225.7 126 81.7
Duzib187G1358 Durio zibethinus HOM05D003803 ORTHO05D004456 5.7e-57 225.3 129 84.5
MD02G1093600 Malus domestica HOM05D003803 ORTHO05D004456 2.2e-56 223.4 301 45.8
Manes.16G094800 Manihot esculenta HOM05D003803 ORTHO05D004456 6.4e-56 221.9 305 58.7
Ciclev10010564m.g Citrus clementina HOM05D003803 ORTHO05D004456 8.3e-56 221.5 133 78.2
Gohir.A07G015200 Gossypium hirsutum HOM05D003803 ORTHO05D004456 1.8e-55 220.3 264 53.8
Potri.018G062400 Populus trichocarpa HOM05D003803 ORTHO05D004456 3.2e-55 219.5 273 50.2
Gorai.010G088900 Gossypium raimondii HOM05D003803 ORTHO05D004456 7.8e-54 214.9 278 54.3
Gohir.A06G077000 Gossypium hirsutum HOM05D003803 ORTHO05D004456 1.7e-53 213.8 279 57.3
MD15G1218900 Malus domestica HOM05D003803 ORTHO05D004456 3.0e-53 213.0 285 44.2
Manes.03G041000 Manihot esculenta HOM05D003803 ORTHO05D004456 7.3e-52 208.4 136 70.6
Gohir.D06G076000 Gossypium hirsutum HOM05D003803 ORTHO05D004456 3.1e-50 203.0 277 57.4
Prupe.7G197000 Prunus persica HOM05D003803 ORTHO05D004456 6.8e-50 201.8 282 51.1
CANSAT56G4286 Cannabis sativa HOM05D003803 ORTHO05D004456 1.3e-48 197.6 117 77.8
TWI63G1012 Tripterygium wilfordii HOM05D003803 ORTHO05D004456 2.2e-48 196.8 109 82.6
Eucgr.C03259 Eucalyptus grandis HOM05D003803 ORTHO05D004456 3.7e-48 196.1 130 73.8
FvH4_1g08850 Fragaria vesca HOM05D003803 ORTHO05D004456 6.4e-48 195.3 284 58.5
CiPaw.03G205300 Carya illinoinensis HOM05D003803 ORTHO05D004456 1.9e-47 193.7 124 75.8
CiPaw.04G142500 Carya illinoinensis HOM05D003803 ORTHO05D004456 7.0e-47 191.8 127 70.1
Glyma.17G048600 Glycine max HOM05D003803 ORTHO05D004456 7.0e-47 191.8 116 78.4
Phvul.003G130200 Phaseolus vulgaris HOM05D003803 ORTHO05D004456 9.2e-47 191.4 126 75.4
PGR044G0570 Punica granatum HOM05D003803 ORTHO05D004456 9.2e-47 191.4 128 74.2
Lalb_Chr13g0299401 Lupinus albus HOM05D003803 ORTHO05D004456 2.7e-46 189.9 130 72.3
Dinv42400 Davidia involucrata HOM05D003803 ORTHO05D004456 3.5e-46 189.5 126 72.2
RcHm_v2.0_Chr2g0095321 Rosa chinensis HOM05D003803 ORTHO05D004456 4.6e-46 189.1 129 73.6
TWI34G0129 Tripterygium wilfordii HOM05D003803 ORTHO05D004456 1.0e-45 188.0 131 72.5
TAR624G1266 Trochodendron aralioides HOM05D003803 ORTHO05D004456 1.3e-45 187.6 276 46.0
Sp6g23850 Schrenkiella parvula HOM05D003803 ORTHO05D004456 3.0e-45 186.4 131 64.9
CARHR192170 Cardamine hirsuta HOM05D003803 ORTHO05D004456 5.0e-45 185.7 115 74.8
MELO3C015527.2 Cucumis melo HOM05D003803 ORTHO05D004456 8.6e-45 184.9 130 66.9
Nn8g38618 Nelumbo nucifera HOM05D003803 ORTHO05D004456 8.6e-45 184.9 130 71.5
CsaV3_2G001120 Cucumis sativus L. HOM05D003803 ORTHO05D004456 3.3e-44 183.0 110 70.9
Lalb_Chr07g0181211 Lupinus albus HOM05D003803 ORTHO05D004456 3.3e-44 183.0 132 68.2
ClCG03G015020 Citrullus lanatus HOM05D003803 ORTHO05D004456 4.3e-44 182.6 116 72.4
A10p19380 Brassica napus HOM05D003803 ORTHO05D004456 7.3e-44 181.8 115 68.7
THA.LOC104799616 Tarenaya hassleriana HOM05D003803 ORTHO05D004456 8.1e-43 178.3 129 65.1
Migut.L01571 Erythranthe guttata HOM05D003803 ORTHO05D004456 2.3e-42 176.8 121 70.2
Solyc07g041980.3 Solanum lycopersicum HOM05D003803 ORTHO05D004456 1.2e-41 174.5 125 68.0
TPR.G12599 Trifolium pratense HOM05D003803 ORTHO05D004456 1.2e-41 174.5 131 68.7
A02p06390 Brassica napus HOM05D003803 ORTHO05D004456 1.5e-41 174.1 128 64.1
BraA02t05584Z Brassica rapa HOM05D003803 ORTHO05D004456 1.5e-41 174.1 128 64.1
BraA10t44015Z Brassica rapa HOM05D003803 ORTHO05D004456 1.5e-41 174.1 128 62.5
SalBow5G3024 Salvia bowleyana HOM05D003803 ORTHO05D004456 1.5e-41 174.1 123 66.7
SalBow5G4531 Salvia bowleyana HOM05D003803 ORTHO05D004456 1.5e-41 174.1 123 66.7
VMungo1215G1786 Vigna mungo HOM05D003803 ORTHO05D004456 2.6e-41 173.3 93 84.9
AL6G32180 Arabidopsis lyrata HOM05D003803 ORTHO05D004456 3.4e-41 172.9 111 71.2
Hma1.2p1_0169F.1_g074460 Hydrangea macrophylla HOM05D003803 ORTHO05D004456 4.4e-41 172.6 128 68.0
BolC2t07055H Brassica oleracea HOM05D003803 ORTHO05D004456 5.8e-41 172.2 128 63.3
CAN.G595.3 Capsicum annuum HOM05D003803 ORTHO05D004456 7.5e-41 171.8 126 67.5
Sabra06G0110200 Salix brachista HOM05D003803 ORTHO05D004456 1.3e-40 171.0 96 83.3
Lj4g0012858 Lotus japonicus HOM05D003803 ORTHO05D004456 8.3e-40 168.3 90 82.2
AT5G20635 Arabidopsis thaliana HOM05D003803 ORTHO05D004456 1.1e-39 167.9 111 70.3
MSTRG.26474 Avicennia marina HOM05D003803 ORTHO05D004456 1.4e-39 167.5 120 68.3
C03p11700 Brassica napus HOM05D003803 ORTHO05D004456 4.1e-39 166.0 120 65.0
BolC3t13641H Brassica oleracea HOM05D003803 ORTHO05D004456 4.1e-39 166.0 120 65.0
Glyma.15G178100 Glycine max HOM05D003803 ORTHO05D004456 5.4e-39 165.6 111 71.2
Glyma.09G070100 Glycine max HOM05D003803 ORTHO05D004456 7.1e-39 165.2 118 69.5
Psat4g018440 Pisum sativum HOM05D003803 ORTHO05D004456 1.2e-38 164.5 86 84.9
QL11p000998 Quercus lobata HOM05D003803 ORTHO05D004456 2.1e-38 163.7 91 81.3
Nn6g35693 Nelumbo nucifera HOM05D003803 ORTHO05D004456 3.5e-38 162.9 126 64.3
Sed0004681 Sechium edule HOM05D003803 ORTHO05D004456 3.5e-38 162.9 127 63.8
A03p10180 Brassica napus HOM05D003803 ORTHO05D004456 6.0e-38 162.2 116 64.7
BraA03t10328Z Brassica rapa HOM05D003803 ORTHO05D004456 6.0e-38 162.2 116 64.7
Oeu007415.1 Olea europaea HOM05D003803 ORTHO05D004456 1.7e-37 160.6 115 70.4
Cc06_g12240 Coffea canephora HOM05D003803 ORTHO05D004456 3.0e-37 159.8 126 62.7
GSVIVG01015067001 Vitis vinifera HOM05D003803 ORTHO05D004456 3.9e-37 159.5 105 73.3
Glyma.13G110900 Glycine max HOM05D003803 ORTHO05D004456 5.1e-37 159.1 106 72.6
FAN26G0190 Fragaria x ananassa HOM05D003803 ORTHO05D004456 1.1e-36 157.9 98 77.6
Lj6g0024210 Lotus japonicus HOM05D003803 ORTHO05D004456 1.1e-36 157.9 126 65.1
Actinidia30227 Actinidia chinensis HOM05D003803 ORTHO05D004456 1.9e-36 157.1 109 75.2
C09p55600 Brassica napus HOM05D003803 ORTHO05D004456 3.3e-36 156.4 103 68.0
Thhalv10014548m.g Eutrema salsugineum HOM05D003803 ORTHO05D004456 5.6e-36 155.6 138 58.7
Oeu000278.1 Olea europaea HOM05D003803 ORTHO05D004456 5.6e-36 155.6 120 66.7
Carub.0006s1897 Capsella rubella HOM05D003803 ORTHO05D004456 1.2e-35 154.5 99 72.7
Psat1g134600 Pisum sativum HOM05D003803 ORTHO05D004456 1.2e-35 154.5 126 65.9
FAN28G2731 Fragaria x ananassa HOM05D003803 ORTHO05D004456 1.6e-35 154.1 119 67.2
BolC9t58422H Brassica oleracea HOM05D003803 ORTHO05D004456 3.6e-35 152.9 118 59.3
PSO421G0234 Papaver somniferum HOM05D003803 ORTHO05D004456 4.7e-35 152.5 122 60.7
Medtr2g042200 Medicago truncatula HOM05D003803 ORTHO05D004456 6.2e-35 152.1 89 79.8
Nitab4.5_0000343g0290 Nicotiana tabacum HOM05D003803 ORTHO05D004456 8.1e-35 151.8 102 72.5
PSO104G0196 Papaver somniferum HOM05D003803 ORTHO05D004456 8.1e-35 151.8 122 59.8
THA.LOC104810996 Tarenaya hassleriana HOM05D003803 ORTHO05D004456 4.4e-33 146.0 297 37.4
Sopen07g021560 Solanum pennellii HOM05D003803 ORTHO05D004456 7.6e-33 145.2 91 74.7
TPR.G8075 Trifolium pratense HOM05D003803 ORTHO05D004456 7.6e-33 145.2 89 76.4
MSTRG.10505 Avicennia marina HOM05D003803 ORTHO05D004456 2.9e-32 143.3 99 73.7
Actinidia29937 Actinidia chinensis HOM05D003803 ORTHO05D004456 5.4e-31 139.0 105 65.7
Cpa.g.sc28.25 Carica papaya HOM05D003803 ORTHO05D004456 9.2e-31 138.3 82 79.3
BcaB01g04775 Brassica carinata HOM05D003803 ORTHO05D004456 1.6e-30 137.5 85 71.8
arahy.Tifrunner.gnm1.ann1.AJ3133 Arachis hypogaea HOM05D003803 ORTHO05D004456 2.1e-30 137.1 92 71.7
arahy.Tifrunner.gnm1.ann1.TX00RK Arachis hypogaea HOM05D003803 ORTHO05D004456 4.6e-30 136.0 92 70.7
Dinv25550 Davidia involucrata HOM05D003803 ORTHO05D004456 4.6e-30 136.0 80 83.8
Sed0026577 Sechium edule HOM05D003803 ORTHO05D004456 2.3e-29 133.7 80 80.0
Sc18g0002620 Simmondsia chinensis HOM05D003803 ORTHO05D004456 3.9e-29 132.9 125 60.0
Lalb_Chr11g0074261 Lupinus albus HOM05D003803 ORTHO05D004456 1.9e-28 130.6 123 55.3
Peaxi162Scf00348g00817 Petunia axillaris HOM05D003803 ORTHO05D004456 8.1e-27 125.2 76 78.9
Actinidia39653 Actinidia chinensis HOM05D003803 ORTHO05D004456 9.0e-26 121.7 83 75.9
Atru.chr7.1717 Acer truncatum HOM05D003803 ORTHO05D004456 4.4e-25 119.4 67 85.1
Zm00001eb314160 Zea mays HOM05D003803 ORTHO05D004456 2.2e-24 117.1 131 46.6
Manes.11G018700 Manihot esculenta HOM05D003803 ORTHO05D004456 3.8e-24 116.3 113 57.5
DCAR_024755 Daucus carota HOM05D003803 ORTHO05D004456 4.9e-24 115.9 119 54.6
FAN23G2205 Fragaria x ananassa HOM05D003803 ORTHO05D004456 4.9e-24 115.9 72 80.6
RcHm_v2.0_Chr6g0246401 Rosa chinensis HOM05D003803 ORTHO05D004456 4.9e-24 115.9 83 65.1
Zm00001eb100230 Zea mays HOM05D003803 ORTHO05D004456 3.2e-23 113.2 104 51.9
Aqoxy7G01029 Aquilegia oxysepala HOM05D003803 ORTHO05D004456 7.1e-23 112.1 84 65.5
MELO3C004657.2 Cucumis melo HOM05D003803 ORTHO05D004456 7.1e-23 112.1 65 75.4
HanXRQChr10g0319741 Helianthus annuus HOM05D003803 ORTHO05D004456 9.3e-23 111.7 98 63.3
arahy.Tifrunner.gnm1.ann1.1Y26QK Arachis hypogaea HOM05D003803 ORTHO05D004456 1.6e-22 110.9 96 59.4
arahy.Tifrunner.gnm1.ann1.KPGD7J Arachis hypogaea HOM05D003803 ORTHO05D004456 1.6e-22 110.9 96 59.4
Sc15g0000470 Simmondsia chinensis HOM05D003803 ORTHO05D004456 2.1e-22 110.5 102 57.8
Sed0024871 Sechium edule HOM05D003803 ORTHO05D004456 2.7e-22 110.2 278 35.3
Hund26046 Selenicereus undatus HOM05D003803 ORTHO05D004456 2.7e-22 110.2 67 79.1
HPP92_004363 Vanilla planifolia HOM05D003803 ORTHO05D004456 2.7e-22 110.2 107 53.3
FAN19G2912 Fragaria x ananassa HOM05D003803 ORTHO05D004456 3.5e-22 109.8 68 82.4
ATR0598G175 Amborella trichopoda HOM05D003803 ORTHO05D004456 1.3e-21 107.8 93 55.9
BcaB08g36515 Brassica carinata HOM05D003803 ORTHO05D004456 8.7e-21 105.1 62 75.8
Os08g0456600 Oryza sativa ssp. japonica HOM05D003803 ORTHO05D004456 1.5e-20 104.4 85 52.9
CsaV3_1G041120 Cucumis sativus L. HOM05D003803 ORTHO05D004456 1.9e-20 104.0 70 75.7
Hma1.2p1_0179F.1_g079480 Hydrangea macrophylla HOM05D003803 ORTHO05D004456 1.9e-20 104.0 131 50.4
CDE05G2490 Ceratophyllum demersum HOM05D003803 ORTHO05D004456 7.3e-20 102.1 144 43.8
Os09g0441900 Oryza sativa ssp. japonica HOM05D003803 ORTHO05D004456 2.1e-19 100.5 91 52.7
SGA_v2.0_scaffold21G09503 Striga asiatica HOM05D003803 ORTHO05D004456 2.8e-19 100.1 89 64.0
Rhsim03G0227100 Rhododendron simsii HOM05D003803 ORTHO05D004456 4.8e-19 99.4 67 80.6
ClCG11G001400 Citrullus lanatus HOM05D003803 ORTHO05D004456 1.5e-17 94.4 115 46.1
COL.COLO4_18088 Corchorus olitorius HOM05D003803 ORTHO05D004456 3.4e-17 93.2 49 91.8
Ca_02184_v3 Cicer arietinum L. HOM05D003803 ORTHO05D004456 9.9e-17 91.7 65 73.8
HPP92_016238 Vanilla planifolia HOM05D003803 ORTHO05D004456 1.7e-16 90.9 115 47.8
Atru.chr1.4007 Acer truncatum HOM05D003803 ORTHO05D004456 2.9e-16 90.1 75 65.3
Medtr8g021170 Medicago truncatula HOM05D003803 ORTHO05D004456 1.9e-15 87.4 126 47.6
Lsat_1_v5_gn_4_94241 Lactuca sativa HOM05D003803 ORTHO05D004456 2.4e-15 87.0 133 45.9
ECA232G3825 Erigeron canadensis HOM05D003803 ORTHO05D004456 3.2e-15 86.7 164 37.2
SEGI_34897 Sequoiadendron giganteum HOM05D003803 ORTHO05D004456 5.4e-15 85.9 75 52.0
Glyma.07G040200 Glycine max HOM05D003803 ORTHO05D004456 1.6e-14 84.3 104 47.1
QL05p003994 Quercus lobata HOM05D003803 ORTHO05D004456 1.6e-14 84.3 100 48.0
Haze_26022 Corylus avellana HOM05D003803 ORTHO05D004456 2.7e-14 83.6 54 79.6
COL.COLO4_30738 Corchorus olitorius HOM05D003803 ORTHO05D004456 4.6e-14 82.8 76 60.5
vmacro06347 Vaccinium macrocarpon HOM05D003803 ORTHO05D004456 1.0e-13 81.6 56 78.6
Lalb_Chr04g0263591 Lupinus albus HOM05D003803 ORTHO05D004456 1.3e-13 81.3 134 43.3
RcHm_v2.0_Chr6g0246681 Rosa chinensis HOM05D003803 ORTHO05D004456 1.8e-13 80.9 61 60.7
TPR.G16739 Trifolium pratense HOM05D003803 ORTHO05D004456 6.7e-13 79.0 67 56.7
SGA_v2.0_scaffold609G53181 Striga asiatica HOM05D003803 ORTHO05D004456 8.7e-13 78.6 61 70.5
HanXRQChr12g0354391 Helianthus annuus HOM05D003803 ORTHO05D004456 1.1e-12 78.2 125 41.6
Rhsim05G0007000 Rhododendron simsii HOM05D003803 ORTHO05D004456 1.5e-12 77.8 45 84.4
FAN26G2608 Fragaria x ananassa HOM05D003803 ORTHO05D004456 1.9e-12 77.4 50 80.0
HanXRQChr09g0276811 Helianthus annuus HOM05D003803 ORTHO05D004456 1.9e-12 77.4 80 55.0
PGSC0003DMG400027887 Solanum tuberosum HOM05D003803 ORTHO05D004456 2.5e-12 77.0 48 75.0
Ca_09305_v3 Cicer arietinum L. HOM05D003803 ORTHO05D004456 3.3e-12 76.6 42 88.1
Thecc.06G122400 Theobroma cacao HOM05D003803 ORTHO05D004456 4.3e-12 76.3 124 45.2
TAR636G1611 Trochodendron aralioides HOM05D003803 ORTHO05D004456 5.6e-12 75.9 49 81.6
Zm00001eb019600 Zea mays HOM05D003803 ORTHO05D004456 5.6e-12 75.9 97 45.4
Psat4g168440 Pisum sativum HOM05D003803 ORTHO05D004456 9.6e-12 75.1 76 55.3
CSS0005199 Camellia sinensis var. sinensis HOM05D003803 ORTHO05D004456 2.8e-11 73.6 68 64.7
Nitab4.5_0009541g0010 Nicotiana tabacum HOM05D003803 ORTHO05D004456 2.8e-11 73.6 47 76.6
unitig_699.g19272 Utricularia gibba HOM05D003803 ORTHO05D004456 1.4e-10 71.2 47 78.7
unitig_85.g27251 Utricularia gibba HOM05D003803 ORTHO05D004456 3.1e-10 70.1 54 63.0
MBI13_g43925_MAGBIO Magnolia biondii HOM05D003803 ORTHO05D004456 4.0e-10 69.7 97 40.2
Os03g0407400 Oryza sativa ssp. japonica HOM05D003803 ORTHO05D004456 5.3e-10 69.3 101 39.6
SEGI_33452 Sequoiadendron giganteum HOM05D003803 ORTHO05D004456 1.5e-09 67.8 97 40.2
BcaB05g22827 Brassica carinata HOM05D003803 ORTHO05D004456 2.0e-09 67.4 49 71.4
BNapus_Darmor_BZH_scaffold_38p01430 Brassica napus HOM05D003803 ORTHO05D004456 2.0e-09 67.4 50 56.0
BcaC03g13781 Brassica carinata HOM05D003803 ORTHO05D004456 4.5e-09 66.2 49 67.3
Haze_16046 Corylus avellana HOM05D000015 ORTHO05D000249 1.7e-08 64.3 52 63.5
Oeu060649.1 Olea europaea HOM05D003803 ORTHO05D004456 1.9e-07 60.8 47 68.1
Hma1.2p1_0291F.1_g114940 Hydrangea macrophylla HOM05D003803 ORTHO05D004456 2.4e-07 60.5 37 78.4
THA.LOC104808881 Tarenaya hassleriana HOM05D003803 ORTHO05D004456 3.2e-07 60.1 52 61.5
Hund20657 Selenicereus undatus HOM05D002369 ORTHO05D002435 9.3e-07 58.5 85 38.8
ATR0626G331 Amborella trichopoda HOM05D002369 ORTHO05D002435 1.6e-06 57.8 71 43.7
AagrBONN_evm.TU.Sc2ySwM_362.2112 Anthoceros agrestis HOM05D002369 ORTHO05D002435 1.6e-06 57.8 65 38.5
Mapoly0073s0064 Marchantia polymorpha HOM05D002369 ORTHO05D002435 2.7e-06 57.0 97 37.1


User provided reference genes

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