Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib168G1968 Durio zibethinus HOM05D003722 ORTHO05D004589 0.0e+00 1405.6 930 100.0
Duzib187G0791 Durio zibethinus HOM05D003722 ORTHO05D004589 0.0e+00 1113.2 1011 79.4
COL.COLO4_21138 Corchorus olitorius HOM05D003722 ORTHO05D004589 0.0e+00 1102.0 1013 78.2
Gohir.A07G019700 Gossypium hirsutum HOM05D003722 ORTHO05D004589 0.0e+00 1090.1 1013 78.5
Thecc.09G063300 Theobroma cacao HOM05D003722 ORTHO05D004589 0.0e+00 1086.2 1011 77.7
Gohir.D07G019500 Gossypium hirsutum HOM05D003722 ORTHO05D004589 0.0e+00 1083.2 1010 77.0
Gorai.001G020200 Gossypium raimondii HOM05D003722 ORTHO05D004589 0.0e+00 1082.4 1007 78.0
Gohir.D06G083100 Gossypium hirsutum HOM05D003722 ORTHO05D004589 6.3e-278 961.1 954 73.1
Gorai.010G096600 Gossypium raimondii HOM05D003722 ORTHO05D004589 1.7e-267 926.4 884 69.1
Prupe.1G404200 Prunus persica HOM05D003722 ORTHO05D004589 4.7e-249 865.1 1034 61.5
Manes.03G053433 Manihot esculenta HOM05D003722 ORTHO05D004589 6.2e-241 838.2 1050 62.9
Manes.16G085600 Manihot esculenta HOM05D003722 ORTHO05D004589 4.9e-238 828.6 1054 62.6
MD15G1049900 Malus domestica HOM05D003722 ORTHO05D004589 1.6e-236 823.5 1039 60.9
Potri.006G220900 Populus trichocarpa HOM05D003722 ORTHO05D004589 7.8e-236 821.2 1060 62.2
Potri.018G048700 Populus trichocarpa HOM05D003722 ORTHO05D004589 4.0e-232 808.9 1050 58.7
MD08G1071300 Malus domestica HOM05D003722 ORTHO05D004589 3.2e-229 799.3 1030 61.7
Ciclev10007327m.g Citrus clementina HOM05D003722 ORTHO05D004589 1.6e-228 797.0 1035 63.8
RcHm_v2.0_Chr6g0311801 Rosa chinensis HOM05D003722 ORTHO05D004589 6.0e-228 795.0 1031 57.4
QL02p017002 Quercus lobata HOM05D003722 ORTHO05D004589 1.3e-227 793.9 1057 62.3
Sabra18G0046400 Salix brachista HOM05D003722 ORTHO05D004589 1.9e-226 790.0 982 59.8
Haze_18293 Corylus avellana HOM05D003722 ORTHO05D004589 2.5e-226 789.6 1058 59.5
TWI34G0168 Tripterygium wilfordii HOM05D003722 ORTHO05D004589 3.4e-223 779.2 1027 63.0
TWI32G0253 Tripterygium wilfordii HOM05D003722 ORTHO05D004589 8.4e-222 774.6 1030 59.4
Sabra06G0170700 Salix brachista HOM05D003722 ORTHO05D004589 9.3e-221 771.2 1126 55.6
FAN27G2597 Fragaria x ananassa HOM05D003722 ORTHO05D004589 2.1e-220 770.0 1038 52.7
FAN24G1820 Fragaria x ananassa HOM05D003722 ORTHO05D004589 1.8e-219 766.9 1029 60.3
FvH4_2g30970 Fragaria vesca HOM05D003722 ORTHO05D004589 3.0e-219 766.1 1029 60.2
CiPaw.15G091900 Carya illinoinensis HOM05D003722 ORTHO05D004589 6.5e-214 748.4 1034 56.7
CANSAT25G1471 Cannabis sativa HOM05D003722 ORTHO05D004589 1.9e-213 746.9 1052 62.9
GSVIVG01035469001 Vitis vinifera HOM05D003722 ORTHO05D004589 6.0e-212 741.9 912 62.6
Dinv02138 Davidia involucrata HOM05D003722 ORTHO05D004589 7.9e-212 741.5 947 58.9
FAN20G0071 Fragaria x ananassa HOM05D003722 ORTHO05D004589 2.3e-211 740.0 1027 59.2
TAR624G1180 Trochodendron aralioides HOM05D003722 ORTHO05D004589 3.1e-208 729.6 895 65.1
TAR636G3697 Trochodendron aralioides HOM05D003722 ORTHO05D004589 2.5e-205 719.9 892 59.3
Dinv41842 Davidia involucrata HOM05D003722 ORTHO05D004589 1.2e-204 717.6 1035 59.1
CsaV3_4G036040 Cucumis sativus L. HOM05D003722 ORTHO05D004589 1.1e-200 704.5 970 60.6
ClCG05G015740 Citrullus lanatus HOM05D003722 ORTHO05D004589 1.4e-200 704.1 1049 58.1
Lj5g0007526 Lotus japonicus HOM05D003722 ORTHO05D004589 5.9e-199 698.7 917 65.1
CSS0013734 Camellia sinensis var. sinensis HOM05D003722 ORTHO05D004589 1.9e-197 693.7 1052 56.9
Hma1.2p1_0836F.1_g225970 Hydrangea macrophylla HOM05D003722 ORTHO05D004589 3.0e-195 686.4 1023 58.7
arahy.Tifrunner.gnm1.ann1.JX1TK4 Arachis hypogaea HOM05D003722 ORTHO05D004589 5.7e-194 682.2 914 63.6
Eucgr.C03158 Eucalyptus grandis HOM05D003722 ORTHO05D004589 1.3e-193 681.0 891 63.7
arahy.Tifrunner.gnm1.ann1.G8USHK Arachis hypogaea HOM05D003722 ORTHO05D004589 1.4e-192 677.6 860 65.5
Atru.chr7.1848 Acer truncatum HOM05D003722 ORTHO05D004589 9.1e-192 674.9 942 59.4
THA.LOC104803705 Tarenaya hassleriana HOM05D003722 ORTHO05D004589 3.5e-191 672.9 1032 54.1
Phvul.009G081900 Phaseolus vulgaris HOM05D003722 ORTHO05D004589 4.5e-191 672.5 910 62.5
Medtr1g015450 Medicago truncatula HOM05D003722 ORTHO05D004589 1.3e-190 671.0 909 61.4
Nn6g35614 Nelumbo nucifera HOM05D003722 ORTHO05D004589 1.3e-190 671.0 895 63.2
AT4G33210 Arabidopsis thaliana HOM05D003722 ORTHO05D004589 8.5e-190 668.3 922 61.3
TAR626G0824 Trochodendron aralioides HOM05D003722 ORTHO05D004589 3.2e-189 666.4 893 63.5
TAR626G0360 Trochodendron aralioides HOM05D003722 ORTHO05D004589 7.2e-189 665.2 893 63.4
Nn8g38669 Nelumbo nucifera HOM05D003722 ORTHO05D004589 9.4e-189 664.8 1043 58.0
DCAR_004379 Daucus carota HOM05D003722 ORTHO05D004589 1.2e-188 664.5 899 64.8
Rhsim03G0063100 Rhododendron simsii HOM05D003722 ORTHO05D004589 1.2e-188 664.5 927 61.4
Glyma.17G225800 Glycine max HOM05D003722 ORTHO05D004589 2.7e-188 663.3 820 67.6
Aqoxy7G04082 Aquilegia oxysepala HOM05D003722 ORTHO05D004589 3.6e-188 662.9 886 63.1
Sc23g0004200 Simmondsia chinensis HOM05D003722 ORTHO05D004589 6.1e-188 662.1 912 62.1
Glyma.14G098900 Glycine max HOM05D003722 ORTHO05D004589 2.3e-187 660.2 913 62.7
Glyma.06G055800 Glycine max HOM05D003722 ORTHO05D004589 8.8e-187 658.3 900 60.4
VMungo0647G1341 Vigna mungo HOM05D003722 ORTHO05D004589 1.1e-186 657.9 1031 56.3
TPR.G38933 Trifolium pratense HOM05D003722 ORTHO05D004589 2.0e-186 657.1 912 61.3
PGR044G0665 Punica granatum HOM05D003722 ORTHO05D004589 3.3e-186 656.4 925 60.8
BraA03t15228Z Brassica rapa HOM05D003722 ORTHO05D004589 5.7e-186 655.6 1033 56.3
Sed0027838 Sechium edule HOM05D003722 ORTHO05D004589 1.7e-185 654.1 862 64.3
Nitab4.5_0000446g0200 Nicotiana tabacum HOM05D003722 ORTHO05D004589 4.8e-185 652.5 1024 51.8
Lsat_1_v5_gn_8_70661 Lactuca sativa HOM05D003722 ORTHO05D004589 8.2e-185 651.7 1026 54.2
MBI19_g11832_MAGBIO Magnolia biondii HOM05D003722 ORTHO05D004589 2.4e-184 650.2 908 62.1
CARHR241240 Cardamine hirsuta HOM05D003722 ORTHO05D004589 4.1e-184 649.4 1016 57.2
Carub.0007s0725 Capsella rubella HOM05D003722 ORTHO05D004589 2.6e-183 646.7 1029 55.5
HanXRQChr09g0261801 Helianthus annuus HOM05D003722 ORTHO05D004589 7.7e-183 645.2 889 54.3
Lalb_Chr22g0356231 Lupinus albus HOM05D003722 ORTHO05D004589 2.9e-182 643.3 885 62.6
BcaNung02160 Brassica carinata HOM05D003722 ORTHO05D004589 3.8e-182 642.9 1030 56.4
Ca_13110_v3 Cicer arietinum L. HOM05D003722 ORTHO05D004589 8.5e-182 641.7 913 60.6
Lalb_Chr23g0267971 Lupinus albus HOM05D003722 ORTHO05D004589 2.5e-181 640.2 893 56.9
Sp7g30950 Schrenkiella parvula HOM05D003722 ORTHO05D004589 7.2e-181 638.6 1032 55.4
BolC7t46400H Brassica oleracea HOM05D003722 ORTHO05D004589 3.6e-180 636.3 1026 56.3
CSS0048906 Camellia sinensis var. sinensis HOM05D003722 ORTHO05D004589 1.0e-179 634.8 825 63.3
Phvul.001G038700 Phaseolus vulgaris HOM05D003722 ORTHO05D004589 3.0e-179 633.3 1030 55.0
A01p04970 Brassica napus HOM05D003722 ORTHO05D004589 1.5e-178 630.9 897 62.3
BraA01t00479Z Brassica rapa HOM05D003722 ORTHO05D004589 2.6e-178 630.2 898 62.4
Actinidia27552 Actinidia chinensis HOM05D003722 ORTHO05D004589 1.7e-177 627.5 1021 54.1
Migut.E01781 Erythranthe guttata HOM05D003722 ORTHO05D004589 2.2e-177 627.1 860 62.9
vmacro07490 Vaccinium macrocarpon HOM05D003722 ORTHO05D004589 2.2e-177 627.1 817 62.4
Thhalv10024312m.g Eutrema salsugineum HOM05D003722 ORTHO05D004589 2.8e-177 626.7 1024 55.4
Oeu036060.1 Olea europaea HOM05D003722 ORTHO05D004589 6.3e-177 625.5 817 60.8
Glyma.04G055700 Glycine max HOM05D003722 ORTHO05D004589 2.4e-176 623.6 907 59.4
AL7G18350 Arabidopsis lyrata HOM05D003722 ORTHO05D004589 5.3e-176 622.5 922 59.7
C01p05420 Brassica napus HOM05D003722 ORTHO05D004589 7.0e-176 622.1 898 61.9
ATR0598G202 Amborella trichopoda HOM05D003722 ORTHO05D004589 1.2e-175 621.3 864 60.8
BolC1t00522H Brassica oleracea HOM05D003722 ORTHO05D004589 3.8e-174 616.3 910 61.3
PSO724G0454 Papaver somniferum HOM05D003722 ORTHO05D004589 5.0e-174 615.9 880 60.5
VMungo1309G1038 Vigna mungo HOM05D003722 ORTHO05D004589 8.5e-174 615.1 886 60.9
Aa31sc290G30 Aethionema arabicum HOM05D003722 ORTHO05D004589 9.4e-173 611.7 1026 53.8
BcaC09g52132 Brassica carinata HOM05D003722 ORTHO05D004589 1.6e-172 610.9 922 60.1
DCAR_001223 Daucus carota HOM05D003722 ORTHO05D004589 1.6e-172 610.9 890 60.7
EL10Ac2g03782 Beta vulgaris HOM05D003722 ORTHO05D004589 1.0e-171 608.2 902 56.7
Nitab4.5_0002831g0060 Nicotiana tabacum HOM05D003722 ORTHO05D004589 1.0e-171 608.2 1019 52.4
PSO135G0299 Papaver somniferum HOM05D003722 ORTHO05D004589 1.0e-171 608.2 880 59.3
Peaxi162Scf00486g01029 Petunia axillaris HOM05D003722 ORTHO05D004589 1.0e-171 608.2 1031 51.4
Sopen08g017250 Solanum pennellii HOM05D003722 ORTHO05D004589 2.3e-171 607.1 1016 50.6
Gohir.A06G081600 Gossypium hirsutum HOM05D003722 ORTHO05D004589 4.0e-171 606.3 688 70.9
AUR62009080 Chenopodium quinoa HOM05D003722 ORTHO05D004589 1.2e-170 604.7 946 56.0
Solyc08g061820.3 Solanum lycopersicum HOM05D003722 ORTHO05D004589 1.5e-170 604.4 1031 50.3
MELO3C016912.2 Cucumis melo HOM05D003722 ORTHO05D004589 2.6e-170 603.6 1018 45.6
ECA236G0039 Erigeron canadensis HOM05D003722 ORTHO05D004589 4.4e-170 602.8 921 58.3
PGSC0003DMG400018806 Solanum tuberosum HOM05D003722 ORTHO05D004589 9.8e-170 601.7 896 56.5
Lj7A221G29 Lonicera japonica HOM05D003722 ORTHO05D004589 6.3e-169 599.0 915 53.1
AUR62020586 Chenopodium quinoa HOM05D003722 ORTHO05D004589 8.3e-169 598.6 889 60.5
Sed0000287 Sechium edule HOM05D003722 ORTHO05D004589 8.3e-169 598.6 942 53.9
Lalb_Chr08g0244821 Lupinus albus HOM05D003722 ORTHO05D004589 4.5e-167 592.8 924 56.9
MSTRG.25985 Avicennia marina HOM05D003722 ORTHO05D004589 2.0e-162 577.4 888 58.2
Migut.A00079 Erythranthe guttata HOM05D003722 ORTHO05D004589 5.7e-162 575.9 809 62.2
HanXRQChr05g0135941 Helianthus annuus HOM05D003722 ORTHO05D004589 1.8e-160 570.9 933 51.8
HanXRQChr03g0065591 Helianthus annuus HOM05D003722 ORTHO05D004589 1.6e-159 567.8 818 60.9
CAN.G881.1 Capsicum annuum HOM05D003722 ORTHO05D004589 5.9e-159 565.8 854 55.4
CiPaw.16G068500 Carya illinoinensis HOM05D003722 ORTHO05D004589 6.6e-158 562.4 866 57.4
arahy.Tifrunner.gnm1.ann1.V7LPDI Arachis hypogaea HOM05D003722 ORTHO05D004589 6.1e-156 555.8 855 58.4
arahy.Tifrunner.gnm1.ann1.V9GZ7C Arachis hypogaea HOM05D003722 ORTHO05D004589 2.6e-154 550.4 855 60.4
SGA_v2.0_scaffold64G21877 Striga asiatica HOM05D003722 ORTHO05D004589 1.3e-153 548.1 894 56.6
BcaC01g01002 Brassica carinata HOM05D003722 ORTHO05D004589 7.8e-151 538.9 894 53.1
BolC3t20973H Brassica oleracea HOM05D003722 ORTHO05D004589 7.8e-151 538.9 894 53.1
C03p86790 Brassica napus HOM05D003722 ORTHO05D004589 1.3e-150 538.1 894 53.6
Medtr1g015480 Medicago truncatula HOM05D003722 ORTHO05D004589 4.3e-149 533.1 790 57.7
Hund19422 Selenicereus undatus HOM05D003722 ORTHO05D004589 9.5e-149 531.9 963 48.9
BraA08t33724Z Brassica rapa HOM05D003722 ORTHO05D004589 1.6e-148 531.2 884 51.8
Cpa.g.sc126.25 Carica papaya HOM05D003722 ORTHO05D004589 6.2e-148 529.3 688 70.1
SGA_v2.0_scaffold163G37999 Striga asiatica HOM05D003722 ORTHO05D004589 6.8e-147 525.8 827 58.5
SalBow4G2891 Salvia bowleyana HOM05D003722 ORTHO05D004589 4.4e-146 523.1 872 55.7
BcaB03g12811 Brassica carinata HOM05D003722 ORTHO05D004589 1.2e-143 515.0 877 50.4
BolC3t20974H Brassica oleracea HOM05D003722 ORTHO05D004589 2.1e-143 514.2 910 50.2
A08p17750 Brassica napus HOM05D003722 ORTHO05D004589 9.5e-141 505.4 883 50.2
C03p86800 Brassica napus HOM05D003722 ORTHO05D004589 2.8e-140 503.8 910 50.0
unitig_748.g8237 Utricularia gibba HOM05D003722 ORTHO05D004589 6.2e-140 502.7 773 64.6
BraA08t33725Z Brassica rapa HOM05D003722 ORTHO05D004589 3.1e-139 500.4 883 50.3
SEGI_30451 Sequoiadendron giganteum HOM05D003722 ORTHO05D004589 3.1e-139 500.4 837 55.3
HPP92_006154 Vanilla planifolia HOM05D003722 ORTHO05D004589 3.7e-137 493.4 873 53.8
SGA_v2.0_scaffold169G38713 Striga asiatica HOM05D003722 ORTHO05D004589 3.2e-136 490.3 820 55.0
TWI39G1239 Tripterygium wilfordii HOM05D003722 ORTHO05D004589 8.1e-132 475.7 741 53.2
Psat6g022880 Pisum sativum HOM05D003722 ORTHO05D004589 3.4e-130 470.3 1016 42.3
A08p17740 Brassica napus HOM05D003722 ORTHO05D004589 5.8e-130 469.5 894 51.7
SEGI_01273 Sequoiadendron giganteum HOM05D003722 ORTHO05D004589 2.2e-129 467.6 868 53.6
Mapoly0202s0013 Marchantia polymorpha HOM05D003722 ORTHO05D004589 1.6e-116 424.9 919 45.8
SMO238G0031 Selaginella moellendorffii HOM05D003722 ORTHO05D004589 2.9e-113 414.1 800 47.5
CDE07G1686 Ceratophyllum demersum HOM05D003722 ORTHO05D004589 3.5e-111 407.1 787 48.8
unitig_4.g30332 Utricularia gibba HOM05D003722 ORTHO05D004589 4.3e-109 400.2 719 41.4
Pp3c5_23900 Physcomitrium patens HOM05D003722 ORTHO05D004589 1.3e-108 398.7 925 43.0
Oeu022303.1 Olea europaea HOM05D003722 ORTHO05D004589 8.1e-108 396.0 858 37.1
Gohir.A06G081780 Gossypium hirsutum HOM05D003722 ORTHO05D004589 1.8e-102 378.3 275 71.6
Actinidia25690 Actinidia chinensis HOM05D003722 ORTHO05D004589 3.0e-102 377.5 546 67.2
Pp3c12_17410 Physcomitrium patens HOM05D003722 ORTHO05D004589 2.8e-100 370.9 921 38.1
Pp3c4_12360 Physcomitrium patens HOM05D003722 ORTHO05D004589 4.2e-96 357.1 854 47.9
MBI13_g31962_MAGBIO Magnolia biondii HOM05D003722 ORTHO05D004589 3.5e-95 354.0 695 52.7
SHI18847 Sapria himalayana HOM05D000105 ORTHO05D000023 2.5e-88 331.3 422 56.4
Pp3c6_6070 Physcomitrium patens HOM05D003722 ORTHO05D004589 3.6e-87 327.4 931 37.1
SalBow1G2799 Salvia bowleyana HOM05D003722 ORTHO05D004589 5.7e-85 320.1 425 71.8
Sc09g0010110 Simmondsia chinensis HOM05D003722 ORTHO05D004589 2.2e-81 308.1 743 48.2
CBR_g11995 Chara braunii HOM05D003722 ORTHO05D004589 2.7e-79 301.2 934 41.0
Zm00001eb048660 Zea mays HOM05D003722 ORTHO05D004589 1.7e-76 292.0 459 38.1
Cc08_g01170 Coffea canephora HOM05D003722 ORTHO05D004589 1.5e-74 285.4 488 48.2
Os10g0396400 Oryza sativa ssp. japonica HOM05D003722 ORTHO05D004589 6.1e-71 273.5 547 54.1
MBI13_g13882_MAGBIO Magnolia biondii HOM05D003722 ORTHO05D004589 2.3e-70 271.6 421 41.6
AagrBONN_evm.TU.Sc2ySwM_117.2463 Anthoceros agrestis HOM05D003722 ORTHO05D004589 3.3e-69 267.7 620 52.4
Cc08_g01160 Coffea canephora HOM05D003722 ORTHO05D004589 1.1e-67 262.7 271 63.5
Zm00001eb223490 Zea mays HOM05D003722 ORTHO05D004589 2.4e-59 235.0 475 33.7
Psat3g079480 Pisum sativum HOM05D003722 ORTHO05D004589 9.4e-56 223.0 144 77.1
Ah.11g044300 Amaranthus hybridus HOM05D003722 ORTHO05D004589 2.8e-52 211.5 229 51.5
Actinidia25691 Actinidia chinensis HOM05D003722 ORTHO05D004589 4.7e-47 194.1 337 40.9
Cpa.g.sc126.26 Carica papaya HOM05D003722 ORTHO05D004589 2.5e-40 171.8 120 73.3
Oeu028128.1 Olea europaea HOM05D003722 ORTHO05D004589 4.1e-35 154.5 311 47.9
Psat5g213240 Pisum sativum HOM05D003722 ORTHO05D004589 7.1e-27 127.1 80 75.0
VMungo0720G2633 Vigna mungo HOM05D003722 ORTHO05D004589 9.2e-27 126.7 126 58.7
VMungo0251G0605 Vigna mungo HOM05D003722 ORTHO05D001926 2.7e-26 125.2 119 58.0
ECA236G4568 Erigeron canadensis HOM05D000007 ORTHO05D000039 1.7e-20 105.9 167 44.3
Mapoly0101s0054 Marchantia polymorpha HOM05D003722 ORTHO05D004589 1.3e-12 79.7 62 61.3
Psat5g114640 Pisum sativum HOM05D003722 ORTHO05D004589 1.1e-08 66.6 192 30.2


User provided reference genes

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