Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib168G1465 Durio zibethinus HOM05D004268 ORTHO05D004958 7.9e-62 240.4 129 100.0
Duzib150G0004 Durio zibethinus HOM05D004268 ORTHO05D004958 2.4e-34 149.1 107 75.7
COL.COLO4_06120 Corchorus olitorius HOM05D004268 ORTHO05D004958 3.2e-31 138.7 107 73.8
Gohir.A09G113900 Gossypium hirsutum HOM05D004268 ORTHO05D004958 9.5e-31 137.1 109 75.2
Gohir.D09G110500 Gossypium hirsutum HOM05D004268 ORTHO05D004958 9.5e-31 137.1 109 75.2
Thecc.09G235200 Theobroma cacao HOM05D004268 ORTHO05D004958 1.1e-26 123.6 108 65.7
Cpa.g.sc84.45 Carica papaya HOM05D004268 ORTHO05D004958 5.0e-24 114.8 106 55.7
CiPaw.14G118100 Carya illinoinensis HOM05D004268 ORTHO05D004958 5.0e-24 114.8 113 62.8
CiPaw.13G159300 Carya illinoinensis HOM05D004268 ORTHO05D004958 1.9e-23 112.8 113 62.8
Potri.001G256900 Populus trichocarpa HOM05D004268 ORTHO05D004958 7.3e-23 110.9 108 58.3
Manes.06G163500 Manihot esculenta HOM05D004268 ORTHO05D004958 9.5e-23 110.5 110 58.2
FAN25G2913 Fragaria x ananassa HOM05D004268 ORTHO05D004958 2.8e-22 109.0 110 60.9
Nn2g15305 Nelumbo nucifera HOM05D004268 ORTHO05D004958 4.7e-22 108.2 107 56.1
RcHm_v2.0_Chr5g0052351 Rosa chinensis HOM05D004268 ORTHO05D004958 6.1e-22 107.8 110 59.1
QL01p004584 Quercus lobata HOM05D004268 ORTHO05D004958 8.0e-22 107.5 109 55.0
Haze_23147 Corylus avellana HOM05D004268 ORTHO05D004958 1.2e-20 103.6 108 61.1
Cfa009783 Carpinus fangiana HOM05D004268 ORTHO05D004958 1.5e-20 103.2 110 60.9
Cpa.g.sc125.13 Carica papaya HOM05D004268 ORTHO05D004958 4.4e-20 101.7 109 57.8
AUR62019312 Chenopodium quinoa HOM05D004268 ORTHO05D004958 5.7e-20 101.3 108 54.6
TWI34G1192 Tripterygium wilfordii HOM05D004268 ORTHO05D004958 5.7e-20 101.3 106 55.7
TAR633G1399 Trochodendron aralioides HOM05D004268 ORTHO05D004958 5.7e-20 101.3 111 53.2
Hma1.2p1_0368F.1_g137310 Hydrangea macrophylla HOM05D004268 ORTHO05D004958 7.5e-20 100.9 113 52.2
MELO3C014587.2 Cucumis melo HOM05D004268 ORTHO05D004958 1.3e-19 100.1 120 50.0
QL04p008292 Quercus lobata HOM05D004268 ORTHO05D004958 1.7e-19 99.8 109 53.2
EL10Ac4g10238 Beta vulgaris HOM05D004268 ORTHO05D004958 2.2e-19 99.4 106 53.8
AUR62000132 Chenopodium quinoa HOM05D004268 ORTHO05D004958 1.4e-18 96.7 108 52.8
Glyma.15G275600 Glycine max HOM05D004268 ORTHO05D004958 1.4e-18 96.7 107 54.2
Potri.009G052500 Populus trichocarpa HOM05D004268 ORTHO05D004958 1.8e-18 96.3 108 52.8
VMungo1127G0621 Vigna mungo HOM05D004268 ORTHO05D004958 1.8e-18 96.3 109 55.0
Cc06_g23280 Coffea canephora HOM05D004268 ORTHO05D004958 4.1e-18 95.1 109 51.4
Duzib138G1697 Durio zibethinus HOM05D004268 ORTHO05D004958 7.0e-18 94.4 109 55.0
Medtr3g030850 Medicago truncatula HOM05D004268 ORTHO05D004958 7.0e-18 94.4 109 53.2
Psat7g196400 Pisum sativum HOM05D004268 ORTHO05D004958 7.0e-18 94.4 109 51.4
PGR102G2953 Punica granatum HOM05D004268 ORTHO05D004958 1.2e-17 93.6 114 52.6
Atru.chr3.2699 Acer truncatum HOM05D004268 ORTHO05D004958 1.6e-17 93.2 110 51.8
FvH4_3g28710 Fragaria vesca HOM05D004268 ORTHO05D004958 1.6e-17 93.2 110 55.5
FAN11G3362 Fragaria x ananassa HOM05D004268 ORTHO05D004958 1.6e-17 93.2 110 55.5
Sc09g0000770 Simmondsia chinensis HOM05D004268 ORTHO05D004958 1.6e-17 93.2 110 55.5
TPR.G35302 Trifolium pratense HOM05D004268 ORTHO05D004958 1.6e-17 93.2 109 56.0
Atru.chr11.2609 Acer truncatum HOM05D004268 ORTHO05D004958 2.0e-17 92.8 110 49.1
Duzib133G0767 Durio zibethinus HOM05D004268 ORTHO05D004958 2.7e-17 92.4 109 53.2
Glyma.15G275700 Glycine max HOM05D004268 ORTHO05D004958 2.7e-17 92.4 108 53.7
Actinidia23976 Actinidia chinensis HOM05D004268 ORTHO05D004958 3.5e-17 92.0 109 51.4
Lj3g0003624 Lotus japonicus HOM05D004268 ORTHO05D004958 4.6e-17 91.7 106 54.7
Psat5g208760 Pisum sativum HOM05D004268 ORTHO05D004958 4.6e-17 91.7 110 53.6
Thecc.01G409600 Theobroma cacao HOM05D004268 ORTHO05D004958 5.9e-17 91.3 109 51.4
Ah.06g194080 Amaranthus hybridus HOM05D004268 ORTHO05D004958 1.0e-16 90.5 107 51.4
ClCG02G023150 Citrullus lanatus HOM05D004268 ORTHO05D004958 1.0e-16 90.5 110 49.1
Phvul.011G009700 Phaseolus vulgaris HOM05D004268 ORTHO05D004958 1.7e-16 89.7 109 48.6
FAN16G2720 Fragaria x ananassa HOM05D004268 ORTHO05D004958 3.0e-16 89.0 110 53.6
Glyma.10G089500 Glycine max HOM05D004268 ORTHO05D004958 3.0e-16 89.0 107 51.4
Medtr4g037505 Medicago truncatula HOM05D004268 ORTHO05D004958 3.0e-16 89.0 108 50.0
Peaxi162Scf00032g00063 Petunia axillaris HOM05D004268 ORTHO05D004958 3.0e-16 89.0 108 50.0
FAN21G1561 Fragaria x ananassa HOM05D004268 ORTHO05D004958 5.0e-16 88.2 108 52.8
Rhsim01G0192200 Rhododendron simsii HOM05D004268 ORTHO05D004958 6.6e-16 87.8 109 48.6
Aa31LG10G3570 Aethionema arabicum HOM05D004268 ORTHO05D004958 8.6e-16 87.4 117 52.1
TPR.G3668 Trifolium pratense HOM05D004268 ORTHO05D004958 1.1e-15 87.0 108 50.0
DCAR_029953 Daucus carota HOM05D004268 ORTHO05D004958 1.5e-15 86.7 108 50.9
A05p27660 Brassica napus HOM05D004268 ORTHO05D004958 1.9e-15 86.3 107 49.5
Ciclev10017247m.g Citrus clementina HOM05D004268 ORTHO05D004958 1.9e-15 86.3 112 49.1
Manes.14G003500 Manihot esculenta HOM05D004268 ORTHO05D004958 1.9e-15 86.3 111 51.4
BcaC05g28213 Brassica carinata HOM05D004268 ORTHO05D004958 2.5e-15 85.9 107 49.5
C05p43040 Brassica napus HOM05D004268 ORTHO05D004958 2.5e-15 85.9 107 49.5
BolC5t33035H Brassica oleracea HOM05D004268 ORTHO05D004958 2.5e-15 85.9 107 49.5
BraA05t21659Z Brassica rapa HOM05D004268 ORTHO05D004958 2.5e-15 85.9 107 49.5
Ciclev10033132m.g Citrus clementina HOM05D004268 ORTHO05D004958 3.3e-15 85.5 114 50.0
AT1G51400 Arabidopsis thaliana HOM05D004268 ORTHO05D004958 5.6e-15 84.7 108 47.2
Lsat_1_v5_gn_6_25460 Lactuca sativa HOM05D004268 ORTHO05D004958 5.6e-15 84.7 113 50.4
AL1G59250 Arabidopsis lyrata HOM05D004268 ORTHO05D004958 7.3e-15 84.3 108 48.1
A06p02510 Brassica napus HOM05D004268 ORTHO05D004958 7.3e-15 84.3 112 49.1
BcaC08g43309 Brassica carinata HOM05D004268 ORTHO05D004958 9.5e-15 84.0 112 49.1
C06p06560 Brassica napus HOM05D004268 ORTHO05D004958 9.5e-15 84.0 112 49.1
BolC6t35768H Brassica oleracea HOM05D004268 ORTHO05D004958 9.5e-15 84.0 112 49.1
SGA_v2.0_scaffold3G01494 Striga asiatica HOM05D004268 ORTHO05D004958 1.2e-14 83.6 108 45.4
CARHR041550 Cardamine hirsuta HOM05D004268 ORTHO05D004958 1.6e-14 83.2 108 47.2
Lj3g0019333 Lotus japonicus HOM05D004268 ORTHO05D004958 1.6e-14 83.2 107 47.7
Prupe.4G250700 Prunus persica HOM05D004268 ORTHO05D004958 1.6e-14 83.2 110 49.1
Thhalv10011883m.g Eutrema salsugineum HOM05D004268 ORTHO05D004958 2.1e-14 82.8 108 47.2
Medtr3g030860 Medicago truncatula HOM05D004268 ORTHO05D004958 2.8e-14 82.4 107 49.5
DCAR_002077 Daucus carota HOM05D004268 ORTHO05D004958 3.6e-14 82.0 111 47.7
Thhalv10021813m.g Eutrema salsugineum HOM05D004268 ORTHO05D004958 3.6e-14 82.0 109 46.8
Glyma.10G089300 Glycine max HOM05D004268 ORTHO05D004958 3.6e-14 82.0 108 48.1
Carub.0003s2095 Capsella rubella HOM05D004268 ORTHO05D004958 4.7e-14 81.6 109 47.7
QL01p004491 Quercus lobata HOM05D004268 ORTHO05D004958 4.7e-14 81.6 109 46.8
Sed0025860 Sechium edule HOM05D004268 ORTHO05D004958 4.7e-14 81.6 115 48.7
BcaB06g26173 Brassica carinata HOM05D004268 ORTHO05D004958 6.2e-14 81.3 107 47.7
PSO541G0301 Papaver somniferum HOM05D004268 ORTHO05D004958 6.2e-14 81.3 112 44.6
CARHR096900 Cardamine hirsuta HOM05D004268 ORTHO05D004958 8.0e-14 80.9 107 48.6
AL3G35000 Arabidopsis lyrata HOM05D004268 ORTHO05D004958 1.1e-13 80.5 107 48.6
Nitab4.5_0004741g0020 Nicotiana tabacum HOM05D004268 ORTHO05D004958 1.1e-13 80.5 99 51.5
Peaxi162Scf00032g00064 Petunia axillaris HOM05D004268 ORTHO05D004958 1.4e-13 80.1 109 45.9
TPR.G35305 Trifolium pratense HOM05D004268 ORTHO05D004958 1.4e-13 80.1 107 49.5
Aa31LG8G7770 Aethionema arabicum HOM05D004268 ORTHO05D004958 1.8e-13 79.7 108 47.2
BraA03t13354Z Brassica rapa HOM05D004268 ORTHO05D004958 1.8e-13 79.7 109 45.9
Nn7g36237 Nelumbo nucifera HOM05D004268 ORTHO05D004958 2.3e-13 79.3 115 43.5
Nn7g36238 Nelumbo nucifera HOM05D004268 ORTHO05D004958 2.3e-13 79.3 115 43.5
AT3G21055 Arabidopsis thaliana HOM05D004268 ORTHO05D004958 3.1e-13 79.0 108 48.1
Ca_14452_v3 Cicer arietinum L. HOM05D003957 ORTHO05D004833 3.1e-13 79.0 108 49.1
Ca_14453_v3 Cicer arietinum L. HOM05D003957 ORTHO05D004833 3.1e-13 79.0 108 49.1
Dinv09347 Davidia involucrata HOM05D004268 ORTHO05D004958 4.0e-13 78.6 106 50.0
Gohir.A08G143800 Gossypium hirsutum HOM05D004268 ORTHO05D004958 4.0e-13 78.6 109 47.7
Gohir.D08G164800 Gossypium hirsutum HOM05D004268 ORTHO05D004958 4.0e-13 78.6 109 47.7
Gorai.004G171800 Gossypium raimondii HOM05D004268 ORTHO05D004958 4.0e-13 78.6 109 47.7
EL10Ac2g04340 Beta vulgaris HOM05D004268 ORTHO05D004958 5.2e-13 78.2 107 43.0
C03p51410 Brassica napus HOM05D004268 ORTHO05D004958 5.2e-13 78.2 109 46.8
CANSAT54G2544 Cannabis sativa HOM05D004268 ORTHO05D004958 5.2e-13 78.2 113 47.8
CDE05G0821 Ceratophyllum demersum HOM05D004268 ORTHO05D004958 5.2e-13 78.2 108 44.4
MBI02_g05661_MAGBIO Magnolia biondii HOM05D004268 ORTHO05D004958 5.2e-13 78.2 118 50.0
Eucgr.B03692 Eucalyptus grandis HOM05D004268 ORTHO05D004958 6.8e-13 77.8 113 46.0
Peaxi162Scf00004g00263 Petunia axillaris HOM05D004268 ORTHO05D004958 6.8e-13 77.8 106 46.2
unitig_8.g2993 Utricularia gibba HOM05D004268 ORTHO05D004958 8.9e-13 77.4 105 44.8
Sp1g38070 Schrenkiella parvula HOM05D004268 ORTHO05D004958 1.5e-12 76.6 109 45.9
DCAR_031628 Daucus carota HOM05D004268 ORTHO05D004958 2.0e-12 76.3 111 45.9
THA.LOC104816876 Tarenaya hassleriana HOM05D004268 ORTHO05D004958 4.4e-12 75.1 118 46.6
Nitab4.5_0002741g0120 Nicotiana tabacum HOM05D004268 ORTHO05D004958 5.8e-12 74.7 109 46.8
Sed0017781 Sechium edule HOM05D004268 ORTHO05D004958 5.8e-12 74.7 110 46.4
MD03G1173700 Malus domestica HOM05D004268 ORTHO05D004958 7.5e-12 74.3 112 49.1
CSS0050517 Camellia sinensis var. sinensis HOM05D004268 ORTHO05D004958 1.3e-11 73.6 114 43.0
MD11G1191900 Malus domestica HOM05D004268 ORTHO05D004958 1.7e-11 73.2 109 47.7
CAN.G821.8 Capsicum annuum HOM05D004268 ORTHO05D004958 2.2e-11 72.8 86 51.2
CDE05G3212 Ceratophyllum demersum HOM05D004268 ORTHO05D004958 2.2e-11 72.8 102 46.1
Oeu063326.1 Olea europaea HOM05D004268 ORTHO05D004958 2.2e-11 72.8 109 42.2
BcaC01g03530 Brassica carinata HOM05D004268 ORTHO05D004958 2.9e-11 72.4 109 44.0
BolC3t17427H Brassica oleracea HOM05D004268 ORTHO05D004958 2.9e-11 72.4 109 44.0
HanXRQChr02g0052031 Helianthus annuus HOM05D004268 ORTHO05D004958 4.9e-11 71.6 111 42.3
TWI32G0064 Tripterygium wilfordii HOM05D004268 ORTHO05D004958 6.4e-11 71.2 106 47.2
TAR623G0940 Trochodendron aralioides HOM05D004268 ORTHO05D004958 8.3e-11 70.9 108 46.3
THA.LOC104817911 Tarenaya hassleriana HOM05D004268 ORTHO05D004958 1.1e-10 70.5 112 43.8
MBI04_g40114_MAGBIO Magnolia biondii HOM05D000074 ORTHO05D000220 1.9e-10 69.7 109 45.9
Ah.10g038780 Amaranthus hybridus HOM05D000040 ORTHO05D000267 2.4e-10 69.3 104 47.1
Dinv22170 Davidia involucrata HOM05D004268 ORTHO05D004958 3.2e-10 68.9 93 44.1
PGR119G0693 Punica granatum HOM05D004268 ORTHO05D004958 3.2e-10 68.9 110 45.5
Solyc01g008510.3 Solanum lycopersicum HOM05D004268 ORTHO05D004958 7.0e-10 67.8 116 38.8
Sopen01g004050 Solanum pennellii HOM05D004268 ORTHO05D004958 9.2e-10 67.4 116 37.9
BcaC09g49044 Brassica carinata HOM05D004268 ORTHO05D004958 4.6e-09 65.1 111 43.2
Lalb_Chr01g0000351 Lupinus albus HOM05D004268 ORTHO05D004958 4.6e-09 65.1 108 41.7
Oeu033136.1 Olea europaea HOM05D004268 ORTHO05D004958 1.0e-08 63.9 40 75.0
C01p43220 Brassica napus HOM05D004268 ORTHO05D004958 1.7e-08 63.2 109 42.2
PGSC0003DMG400010498 Solanum tuberosum HOM05D004268 ORTHO05D004958 1.7e-08 63.2 86 46.5
Potri.001G265000 Populus trichocarpa HOM05D004268 ORTHO05D004958 3.0e-08 62.4 89 44.9
Migut.N02326 Erythranthe guttata HOM05D004268 ORTHO05D004958 3.9e-08 62.0 38 76.3
PGSC0003DMG400019098 Solanum tuberosum HOM05D004268 ORTHO05D004958 8.6e-08 60.8 116 35.3
Actinidia16340 Actinidia chinensis HOM05D004268 ORTHO05D004958 1.1e-07 60.5 96 42.7
SEGI_11181 Sequoiadendron giganteum HOM05D004268 ORTHO05D004958 1.9e-07 59.7 122 36.9
ECA233G4176 Erigeron canadensis HOM05D004268 ORTHO05D004958 3.3e-07 58.9 114 41.2
BolC1t04268H Brassica oleracea HOM05D004268 ORTHO05D004958 4.3e-07 58.5 109 40.4
BraA01t03491Z Brassica rapa HOM05D004268 ORTHO05D004958 4.3e-07 58.5 109 39.4
CSS0020424 Camellia sinensis var. sinensis HOM05D004268 ORTHO05D004958 1.2e-06 57.0 108 38.0
BraA06t23458Z Brassica rapa HOM05D004268 ORTHO05D004958 1.6e-06 56.6 40 72.5
Nitab4.5_0004438g0050 Nicotiana tabacum HOM05D004268 ORTHO05D004958 1.6e-06 56.6 109 39.4
Sp3g19010 Schrenkiella parvula HOM05D004268 ORTHO05D004958 1.6e-06 56.6 109 39.4
A01p33800 Brassica napus HOM05D004268 ORTHO05D004958 2.1e-06 56.2 109 38.5
ATR0763G199 Amborella trichopoda HOM05D004268 ORTHO05D004958 4.7e-06 55.1 114 40.4
Aqoxy1G00277 Aquilegia oxysepala HOM05D004268 ORTHO05D004958 4.7e-06 55.1 40 62.5
Hma1.2p1_0495F.1_g165730 Hydrangea macrophylla HOM05D004268 ORTHO05D004958 4.7e-06 55.1 36 72.2


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