Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib168G1434 Durio zibethinus HOM05D002816 ORTHO05D005633 0.0e+00 2072.4 1046 100.0
Duzib150G1626 Durio zibethinus HOM05D002816 ORTHO05D005633 0.0e+00 1863.6 1046 89.1
Thecc.09G223700 Theobroma cacao HOM05D002816 ORTHO05D005633 0.0e+00 1860.5 1046 88.0
COL.COLO4_09898 Corchorus olitorius HOM05D002816 ORTHO05D005633 0.0e+00 1834.7 1047 86.5
Gohir.D05G070300 Gossypium hirsutum HOM05D002816 ORTHO05D005633 0.0e+00 1805.0 1043 84.9
Gorai.009G071300 Gossypium raimondii HOM05D002816 ORTHO05D005633 0.0e+00 1801.9 1046 84.7
Gohir.A05G067400 Gossypium hirsutum HOM05D002816 ORTHO05D005633 0.0e+00 1791.9 1043 84.9
Potri.003G210600 Populus trichocarpa HOM05D002816 ORTHO05D005633 0.0e+00 1672.1 1044 78.2
Dinv36301 Davidia involucrata HOM05D002816 ORTHO05D005633 0.0e+00 1667.5 1048 77.5
Potri.T085701 Populus trichocarpa HOM05D002816 ORTHO05D005633 0.0e+00 1662.1 1044 77.5
Potri.003G210701 Populus trichocarpa HOM05D002816 ORTHO05D005633 0.0e+00 1661.4 1044 77.5
QL01p006152 Quercus lobata HOM05D002816 ORTHO05D005633 0.0e+00 1634.8 1043 76.5
Haze_23048 Corylus avellana HOM05D002816 ORTHO05D005633 0.0e+00 1631.3 1048 76.3
Cfa009698 Carpinus fangiana HOM05D002816 ORTHO05D005633 0.0e+00 1630.5 1042 76.6
CiPaw.13G165300 Carya illinoinensis HOM05D002816 ORTHO05D005633 0.0e+00 1626.3 1046 75.3
Manes.14G014200 Manihot esculenta HOM05D002816 ORTHO05D005633 0.0e+00 1626.3 1046 76.3
TWI75G1088 Tripterygium wilfordii HOM05D002816 ORTHO05D005633 0.0e+00 1611.3 1051 76.1
CSS0023415 Camellia sinensis var. sinensis HOM05D002816 ORTHO05D005633 0.0e+00 1602.8 1048 75.1
GSVIVG01025332001 Vitis vinifera HOM05D002816 ORTHO05D005633 0.0e+00 1600.9 1045 74.9
CSS0044925 Camellia sinensis var. sinensis HOM05D002816 ORTHO05D005633 0.0e+00 1599.7 1045 75.4
Cpa.g.sc84.106 Carica papaya HOM05D002816 ORTHO05D005633 0.0e+00 1597.4 1048 74.1
Ciclev10017962m.g Citrus clementina HOM05D002816 ORTHO05D005633 0.0e+00 1594.7 1046 74.8
TAR163G0001 Trochodendron aralioides HOM05D002816 ORTHO05D005633 0.0e+00 1594.7 1044 74.6
Prupe.6G018300 Prunus persica HOM05D002816 ORTHO05D005633 0.0e+00 1568.5 1045 73.9
MD03G1020900 Malus domestica HOM05D002816 ORTHO05D005633 0.0e+00 1565.4 1044 73.9
MD11G1022500 Malus domestica HOM05D002816 ORTHO05D005633 0.0e+00 1559.7 1047 73.8
Eucgr.J00810 Eucalyptus grandis HOM05D002816 ORTHO05D005633 0.0e+00 1559.3 1047 73.4
FvH4_3g43570 Fragaria vesca HOM05D002816 ORTHO05D005633 0.0e+00 1550.0 1045 73.4
FAN16G1696 Fragaria x ananassa HOM05D002816 ORTHO05D005633 0.0e+00 1550.0 1047 73.3
FAN11G3609 Fragaria x ananassa HOM05D002816 ORTHO05D005633 0.0e+00 1548.9 1044 73.4
Hma1.2p1_2304F.1_g319340 Hydrangea macrophylla HOM05D002816 ORTHO05D005633 0.0e+00 1548.5 1049 73.3
FAN21G1421 Fragaria x ananassa HOM05D002816 ORTHO05D005633 0.0e+00 1548.1 1045 73.3
RcHm_v2.0_Chr5g0078141 Rosa chinensis HOM05D002816 ORTHO05D005633 0.0e+00 1548.1 1044 73.2
CANSAT54G2844 Cannabis sativa HOM05D002816 ORTHO05D005633 0.0e+00 1546.6 1049 72.4
FAN25G1910 Fragaria x ananassa HOM05D002816 ORTHO05D005633 0.0e+00 1543.1 1045 73.0
Oeu014059.1 Olea europaea HOM05D002816 ORTHO05D005633 0.0e+00 1538.1 1047 70.8
Aqoxy1G00177 Aquilegia oxysepala HOM05D002816 ORTHO05D005633 0.0e+00 1518.4 1057 71.8
DCAR_023760 Daucus carota HOM05D002816 ORTHO05D005633 0.0e+00 1510.4 1048 70.7
Eucgr.J00812 Eucalyptus grandis HOM05D002816 ORTHO05D005633 0.0e+00 1508.8 1047 71.1
Eucgr.J00816 Eucalyptus grandis HOM05D002816 ORTHO05D005633 0.0e+00 1497.6 1050 71.1
ECA238G3506 Erigeron canadensis HOM05D002816 ORTHO05D005633 0.0e+00 1496.1 1047 69.5
PGR119G0739 Punica granatum HOM05D002816 ORTHO05D005633 0.0e+00 1492.2 1022 70.6
Lsat_1_v5_gn_2_101081 Lactuca sativa HOM05D002816 ORTHO05D005633 0.0e+00 1491.5 1049 69.2
MELO3C014642.2 Cucumis melo HOM05D002816 ORTHO05D005633 0.0e+00 1485.7 1045 70.0
Glyma.15G031700 Glycine max HOM05D002816 ORTHO05D005633 0.0e+00 1482.2 1059 69.8
HanXRQChr07g0196931 Helianthus annuus HOM05D002816 ORTHO05D005633 0.0e+00 1481.5 1047 68.9
ClCG02G023650 Citrullus lanatus HOM05D002816 ORTHO05D005633 0.0e+00 1481.1 1042 70.0
Atru.chr3.2513 Acer truncatum HOM05D002816 ORTHO05D005633 0.0e+00 1477.2 1046 71.1
CsaV3_4G023760 Cucumis sativus L. HOM05D002816 ORTHO05D005633 0.0e+00 1477.2 1045 70.0
Peaxi162Scf00559g00421 Petunia axillaris HOM05D002816 ORTHO05D005633 0.0e+00 1469.5 1047 68.9
Glyma.13G342600 Glycine max HOM05D002816 ORTHO05D005633 0.0e+00 1469.1 1063 68.9
Lj3g0016219 Lotus japonicus HOM05D002816 ORTHO05D005633 0.0e+00 1460.3 1057 68.7
Cc01_g04160 Coffea canephora HOM05D002816 ORTHO05D005633 0.0e+00 1457.2 1043 67.9
Nitab4.5_0003796g0070 Nicotiana tabacum HOM05D002816 ORTHO05D005633 0.0e+00 1456.4 1048 68.6
Sed0025537 Sechium edule HOM05D002816 ORTHO05D005633 0.0e+00 1453.3 1041 69.3
Migut.D00561 Erythranthe guttata HOM05D002816 ORTHO05D005633 0.0e+00 1450.3 1048 67.8
Nitab4.5_0009808g0040 Nicotiana tabacum HOM05D002816 ORTHO05D005633 0.0e+00 1447.2 1036 69.0
CAN.G388.65 Capsicum annuum HOM05D002816 ORTHO05D005633 0.0e+00 1446.8 1050 68.2
Psat5g289080 Pisum sativum HOM05D002816 ORTHO05D005633 0.0e+00 1445.3 1068 66.9
VMungo1080G0972 Vigna mungo HOM05D002816 ORTHO05D005633 0.0e+00 1444.9 1059 67.6
PGSC0003DMG400021382 Solanum tuberosum HOM05D002816 ORTHO05D005633 0.0e+00 1437.9 1057 68.0
Actinidia16293 Actinidia chinensis HOM05D002816 ORTHO05D005633 0.0e+00 1434.5 1044 67.8
MBI04_g27132_MAGBIO Magnolia biondii HOM05D002816 ORTHO05D005633 0.0e+00 1433.7 1024 68.8
TPR.G18843 Trifolium pratense HOM05D002816 ORTHO05D005633 0.0e+00 1433.7 1065 66.6
Solyc01g006640.1 Solanum lycopersicum HOM05D002816 ORTHO05D005633 0.0e+00 1429.5 1054 67.3
Sopen01g002630 Solanum pennellii HOM05D002816 ORTHO05D005633 0.0e+00 1429.1 1053 67.8
Medtr2g098490 Medicago truncatula HOM05D002816 ORTHO05D005633 0.0e+00 1427.9 1059 66.7
arahy.Tifrunner.gnm1.ann1.YK6NC6 Arachis hypogaea HOM05D002816 ORTHO05D005633 0.0e+00 1422.5 1055 66.4
PGR119G2184 Punica granatum HOM05D002816 ORTHO05D005633 0.0e+00 1421.0 1049 66.5
arahy.Tifrunner.gnm1.ann1.4LCW9K Arachis hypogaea HOM05D002816 ORTHO05D005633 0.0e+00 1419.4 1055 66.2
DCAR_029714 Daucus carota HOM05D002816 ORTHO05D005633 0.0e+00 1404.4 1045 65.6
ECA233G2205 Erigeron canadensis HOM05D002816 ORTHO05D005633 0.0e+00 1400.6 1047 65.1
HanXRQChr02g0056791 Helianthus annuus HOM05D002816 ORTHO05D005633 0.0e+00 1384.4 1044 64.4
CAN.G388.66 Capsicum annuum HOM05D002816 ORTHO05D005633 0.0e+00 1363.6 1048 62.4
Lsat_1_v5_gn_6_50280 Lactuca sativa HOM05D002816 ORTHO05D005633 0.0e+00 1358.6 1041 62.8
vmacro22895 Vaccinium macrocarpon HOM05D002816 ORTHO05D005633 0.0e+00 1353.2 1044 65.2
Migut.N02292 Erythranthe guttata HOM05D002816 ORTHO05D005633 0.0e+00 1328.2 1045 62.4
Solyc01g006600.3 Solanum lycopersicum HOM05D002816 ORTHO05D005633 0.0e+00 1327.8 1040 61.0
SalBow5G4185 Salvia bowleyana HOM05D002816 ORTHO05D005633 0.0e+00 1310.0 1050 61.3
Os04g0473900 Oryza sativa ssp. japonica HOM05D002816 ORTHO05D005633 0.0e+00 1295.0 1046 61.8
Sopen01g002590 Solanum pennellii HOM05D002816 ORTHO05D005633 0.0e+00 1289.6 1048 59.4
Cc01_g04080 Coffea canephora HOM05D002816 ORTHO05D005633 0.0e+00 1284.6 1016 62.3
Zm00001eb079870 Zea mays HOM05D002816 ORTHO05D005633 0.0e+00 1270.4 1051 60.5
ECA233G1587 Erigeron canadensis HOM05D002816 ORTHO05D005633 0.0e+00 1241.5 1043 60.2
ATR0605G130 Amborella trichopoda HOM05D002816 ORTHO05D005633 0.0e+00 1199.9 1051 57.3
Lsat_1_v5_gn_6_50161 Lactuca sativa HOM05D002816 ORTHO05D005633 0.0e+00 1148.3 888 62.4
SEGI_27256 Sequoiadendron giganteum HOM05D002816 ORTHO05D005633 1.6e-282 976.5 1089 48.9
Actinidia39381 Actinidia chinensis HOM05D002816 ORTHO05D005633 4.0e-281 971.8 717 69.0
SEGI_08878 Sequoiadendron giganteum HOM05D002816 ORTHO05D005633 5.8e-280 968.0 1071 48.9
SEGI_13421 Sequoiadendron giganteum HOM05D002816 ORTHO05D005633 1.4e-278 963.4 1092 48.3
MBI04_g14277_MAGBIO Magnolia biondii HOM05D002816 ORTHO05D005633 2.2e-271 939.5 774 62.7
Lj1A364T31 Lonicera japonica HOM05D002816 ORTHO05D005633 3.3e-259 899.0 841 57.7
Lju1319A3T40 Lonicera japonica HOM05D002816 ORTHO05D005633 9.4e-238 827.8 585 70.6
Glyma.12G054833 Glycine max HOM05D002816 ORTHO05D005633 2.2e-226 790.0 1052 44.5
arahy.Tifrunner.gnm1.ann1.D5VX0F Arachis hypogaea HOM05D002816 ORTHO05D005633 3.6e-221 772.7 1045 43.3
arahy.Tifrunner.gnm1.ann1.S74NHW Arachis hypogaea HOM05D002816 ORTHO05D005633 3.0e-220 769.6 1045 43.4
AagrBONN_evm.TU.Sc2ySwM_344.2597 Anthoceros agrestis HOM05D002816 ORTHO05D005633 5.9e-216 755.4 1172 39.2
SMO166G0063 Selaginella moellendorffii HOM05D002816 ORTHO05D005633 4.7e-213 745.7 1094 41.8
Lalb_Chr03g0026201 Lupinus albus HOM05D002816 ORTHO05D005633 1.5e-211 740.7 1038 43.4
Psat7g213680 Pisum sativum HOM05D002816 ORTHO05D005633 1.4e-209 734.2 1049 41.7
VMungo1127G0859 Vigna mungo HOM05D002816 ORTHO05D005633 1.3e-207 727.6 1045 41.8
Actinidia06323 Actinidia chinensis HOM05D002816 ORTHO05D005633 3.9e-207 726.1 763 52.9
MBI04_g27135_MAGBIO Magnolia biondii HOM05D002816 ORTHO05D005633 6.6e-207 725.3 571 63.6
TPR.G13661 Trifolium pratense HOM05D004419 ORTHO05D005633 6.8e-204 715.3 1047 40.7
Medtr4g066130 Medicago truncatula HOM05D002816 ORTHO05D005633 2.2e-202 710.3 1048 40.6
Lj3g0024115 Lotus japonicus HOM05D002816 ORTHO05D005633 2.8e-197 693.3 1003 41.9
CSS0011782 Camellia sinensis var. sinensis HOM05D002816 ORTHO05D005633 1.2e-192 677.9 449 72.2
SMO115G0335 Selaginella moellendorffii HOM05D002816 ORTHO05D005633 7.8e-192 675.2 1077 39.6
Ca_20583_v3 Cicer arietinum L. HOM05D002816 ORTHO05D005633 1.0e-175 621.7 1047 37.6
Lju1319A3T41 Lonicera japonica HOM05D002816 ORTHO05D005633 4.2e-169 599.7 432 69.9
AagrBONN_evm.TU.Sc2ySwM_344.2583 Anthoceros agrestis HOM05D002816 ORTHO05D005633 8.4e-162 575.5 821 41.2
Mapoly0023s0010 Marchantia polymorpha HOM05D002816 ORTHO05D005633 1.9e-161 574.3 1147 33.6
MBI04_g27134_MAGBIO Magnolia biondii HOM05D002816 ORTHO05D005633 7.1e-161 572.4 451 62.5
PSO339G1112 Papaver somniferum HOM05D002816 ORTHO05D005633 4.2e-153 546.6 382 69.6
Phvul.011G056700 Phaseolus vulgaris HOM05D002816 ORTHO05D005633 4.4e-118 430.3 374 61.2
CSS0006060 Camellia sinensis var. sinensis HOM05D002816 ORTHO05D005633 1.2e-115 422.2 280 73.9
Psat7g121000 Pisum sativum HOM05D002816 ORTHO05D005633 4.0e-111 407.1 364 55.2
SEGI_08242 Sequoiadendron giganteum HOM05D002816 ORTHO05D005633 1.3e-106 392.1 1075 28.7
CSS0038299 Camellia sinensis var. sinensis HOM05D002816 ORTHO05D005633 3.8e-106 390.6 282 67.4
MBI04_g14276_MAGBIO Magnolia biondii HOM05D002816 ORTHO05D005633 3.3e-73 281.2 182 73.6
Psat7g120960 Pisum sativum HOM05D002816 ORTHO05D005633 1.9e-68 265.4 180 68.9
CSS0039119 Camellia sinensis var. sinensis HOM05D002816 ORTHO05D005633 6.0e-67 260.4 181 72.4
Lj1C364T9 Lonicera japonica HOM05D002816 ORTHO05D005633 3.1e-55 221.5 129 82.9
Actinidia39380 Actinidia chinensis HOM05D002816 ORTHO05D005633 6.5e-45 187.2 147 68.0
CSS0015622 Camellia sinensis var. sinensis HOM05D002816 ORTHO05D005633 1.8e-42 179.1 112 75.0
Psat7g109040 Pisum sativum HOM05D002816 ORTHO05D005633 8.5e-37 160.2 130 63.8
Psat6g177280 Pisum sativum HOM05D002816 ORTHO05D020972 3.6e-35 154.8 113 68.1
SEGI_37312 Sequoiadendron giganteum HOM05D002816 ORTHO05D005633 3.6e-35 154.8 185 43.2
Psat6g019120 Pisum sativum HOM05D002816 ORTHO05D005633 8.8e-34 150.2 120 60.0
Psat1g045080 Pisum sativum HOM05D002816 ORTHO05D005633 1.5e-33 149.4 188 47.3
Psat7g109160 Pisum sativum HOM05D002816 ORTHO05D005633 1.3e-32 146.4 98 73.5
Psat1g045000 Pisum sativum HOM05D002816 ORTHO05D020972 1.1e-31 143.3 142 54.9
CAN.G179.1 Capsicum annuum HOM05D002816 ORTHO05D005633 1.5e-22 112.8 291 31.3
ECA233G3676 Erigeron canadensis HOM05D000764 ORTHO05D002006 3.9e-18 98.2 79 60.8
CAN.G396.13 Capsicum annuum HOM05D002719 ORTHO05D002938 1.1e-15 90.1 72 61.1
ECA233G1205 Erigeron canadensis HOM05D002816 ORTHO05D005633 1.2e-11 76.6 61 63.9


User provided reference genes

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