Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib168G1036 Durio zibethinus HOM05D000751 ORTHO05D005618 0.0e+00 1421.0 737 100.0
Thecc.09G180200 Theobroma cacao HOM05D000751 ORTHO05D005618 0.0e+00 1271.5 737 89.4
Gorai.009G003500 Gossypium raimondii HOM05D000751 ORTHO05D005618 0.0e+00 1087.4 609 88.8
Gohir.D05G003900 Gossypium hirsutum HOM05D000751 ORTHO05D005618 5.0e-312 1073.5 604 88.7
Gohir.A05G003500 Gossypium hirsutum HOM05D000751 ORTHO05D005618 1.0e-310 1069.7 604 87.7
GSVIVG01010908001 Vitis vinifera HOM05D000751 ORTHO05D005618 7.5e-266 920.6 758 64.8
TAR636G3589 Trochodendron aralioides HOM05D000751 ORTHO05D005618 6.0e-263 911.0 782 63.0
CSS0048015 Camellia sinensis var. sinensis HOM05D000751 ORTHO05D005618 7.8e-263 910.6 772 62.7
Actinidia06357 Actinidia chinensis HOM05D000751 ORTHO05D005618 3.9e-262 908.3 759 64.4
Ciclev10030781m.g Citrus clementina HOM05D000751 ORTHO05D005618 5.8e-258 894.4 761 63.3
TWI38G2172 Tripterygium wilfordii HOM05D000751 ORTHO05D005618 1.5e-250 869.8 765 60.9
Cfa016755 Carpinus fangiana HOM05D000751 ORTHO05D005618 6.4e-249 864.4 706 63.5
CiPaw.14G110300 Carya illinoinensis HOM05D000751 ORTHO05D005618 7.1e-248 860.9 746 61.7
Atru.chr11.2504 Acer truncatum HOM05D000751 ORTHO05D005618 6.0e-247 857.8 764 60.6
Eucgr.A01411 Eucalyptus grandis HOM05D000751 ORTHO05D005618 1.7e-246 856.3 757 59.3
Prupe.1G079600 Prunus persica HOM05D000751 ORTHO05D005618 5.1e-246 854.7 766 59.8
Manes.17G002500 Manihot esculenta HOM05D000751 ORTHO05D005618 2.1e-244 849.4 712 61.2
Aqoxy2G02196 Aquilegia oxysepala HOM05D000751 ORTHO05D005618 1.1e-243 847.0 760 60.0
Hma1.2p1_0207F.1_g087810 Hydrangea macrophylla HOM05D000751 ORTHO05D005618 3.4e-242 842.0 764 60.6
CANSAT11G2085 Cannabis sativa HOM05D000751 ORTHO05D005618 1.7e-238 829.7 771 58.2
Potri.003G010000 Populus trichocarpa HOM05D000751 ORTHO05D005618 1.3e-236 823.5 681 61.7
Cpa.g.sc86.27 Carica papaya HOM05D000751 ORTHO05D005618 5.8e-234 814.7 619 66.6
MELO3C017440.2 Cucumis melo HOM05D000751 ORTHO05D005618 7.6e-234 814.3 607 66.1
EL10Ac2g02594 Beta vulgaris HOM05D000751 ORTHO05D005618 1.1e-232 810.4 685 60.0
EL10As14g24084 Beta vulgaris HOM05D000751 ORTHO05D005618 2.7e-231 805.8 685 59.9
Nn8g40996 Nelumbo nucifera HOM05D000751 ORTHO05D005618 2.7e-231 805.8 763 57.4
CsaV3_1G031770 Cucumis sativus L. HOM05D000751 ORTHO05D005618 3.5e-231 805.4 617 65.2
THA.LOC104813512 Tarenaya hassleriana HOM05D000751 ORTHO05D005618 1.3e-230 803.5 757 58.1
Sed0012322 Sechium edule HOM05D000751 ORTHO05D005618 3.9e-230 802.0 701 59.6
Nitab4.5_0000074g0030 Nicotiana tabacum HOM05D000751 ORTHO05D005618 5.6e-229 798.1 767 57.6
FvH4_4g07640 Fragaria vesca HOM05D000751 ORTHO05D005618 7.4e-229 797.7 784 55.2
MBI16_g18209_MAGBIO Magnolia biondii HOM05D000751 ORTHO05D000889 9.6e-229 797.3 712 60.3
RcHm_v2.0_Chr4g0400251 Rosa chinensis HOM05D000751 ORTHO05D005618 8.4e-225 784.3 774 54.3
Carub.0001s1742 Capsella rubella HOM05D000751 ORTHO05D005618 2.5e-224 782.7 754 57.2
Lsat_1_v5_gn_7_56501 Lactuca sativa HOM05D000751 ORTHO05D005618 9.3e-224 780.8 752 57.6
AL1G30040 Arabidopsis lyrata HOM05D000751 ORTHO05D005618 1.3e-222 776.9 748 57.2
Hund24686 Selenicereus undatus HOM05D000751 ORTHO05D005618 2.3e-222 776.2 712 56.3
Cc06_g22130 Coffea canephora HOM05D000751 ORTHO05D005618 3.9e-222 775.4 679 62.2
PSO478G0715 Papaver somniferum HOM05D000751 ORTHO05D005618 3.3e-221 772.3 751 54.5
AT1G17690 Arabidopsis thaliana HOM05D000751 ORTHO05D005618 1.3e-220 770.4 753 56.6
Aa31LG7G2520 Aethionema arabicum HOM05D000751 ORTHO05D005618 2.1e-220 769.6 719 57.9
A08p30790 Brassica napus HOM05D000751 ORTHO05D005618 4.8e-220 768.5 745 55.6
Thhalv10006892m.g Eutrema salsugineum HOM05D000751 ORTHO05D005618 4.5e-218 761.9 749 55.1
Lalb_Chr02g0148081 Lupinus albus HOM05D000751 ORTHO05D005618 1.3e-217 760.4 648 60.8
ECA240G3678 Erigeron canadensis HOM05D000751 ORTHO05D005618 2.9e-217 759.2 765 56.3
Nitab4.5_0008918g0010 Nicotiana tabacum HOM05D000751 ORTHO05D005618 1.4e-216 756.9 765 56.1
MSTRG.26530 Avicennia marina HOM05D000751 ORTHO05D005618 1.6e-215 753.4 758 53.6
CARHR018290 Cardamine hirsuta HOM05D000751 ORTHO05D005618 1.6e-215 753.4 754 55.2
Sc06g0007900 Simmondsia chinensis HOM05D000751 ORTHO05D005618 2.1e-215 753.1 542 67.0
C08p18130 Brassica napus HOM05D000751 ORTHO05D005618 3.5e-215 752.3 749 54.6
FAN07G1720 Fragaria x ananassa HOM05D000751 ORTHO05D005618 1.9e-213 746.5 870 49.5
Glyma.09G057700 Glycine max HOM05D000751 ORTHO05D005618 2.5e-213 746.1 652 59.2
BolC8t49447H Brassica oleracea HOM05D000751 ORTHO05D005618 3.3e-213 745.7 765 54.1
Peaxi162Scf00324g00731 Petunia axillaris HOM05D000751 ORTHO05D005618 5.7e-213 745.0 752 54.8
VMungo1309G0231 Vigna mungo HOM05D000751 ORTHO05D005618 5.7e-213 745.0 665 58.5
BraA08t35010Z Brassica rapa HOM05D000751 ORTHO05D005618 2.8e-212 742.7 747 54.5
Phvul.009G238100 Phaseolus vulgaris HOM05D000751 ORTHO05D005618 6.3e-212 741.5 664 59.0
DCAR_007397 Daucus carota HOM05D000751 ORTHO05D005618 5.3e-211 738.4 756 55.2
PSO017G1776 Papaver somniferum HOM05D000751 ORTHO05D005618 1.2e-210 737.3 773 52.0
vmacro08789 Vaccinium macrocarpon HOM05D000751 ORTHO05D005618 5.0e-209 731.9 1059 46.4
Sp4g05240 Schrenkiella parvula HOM05D000751 ORTHO05D005618 1.4e-206 723.8 587 62.0
Lj6g0015551 Lotus japonicus HOM05D000751 ORTHO05D005618 3.0e-206 722.6 645 58.6
Migut.L01901 Erythranthe guttata HOM05D000751 ORTHO05D005618 6.7e-206 721.5 596 60.2
ClCG06G013510 Citrullus lanatus HOM05D000751 ORTHO05D005618 4.8e-204 715.3 762 51.6
TPR.G9024 Trifolium pratense HOM05D000751 ORTHO05D005618 1.7e-201 706.8 652 57.4
FAN17G2112 Fragaria x ananassa HOM05D000751 ORTHO05D005618 5.0e-201 705.3 846 48.6
ATR0626G151 Amborella trichopoda HOM05D000751 ORTHO05D005618 6.5e-201 704.9 718 52.6
Thhalv10023137m.g Eutrema salsugineum HOM05D000751 ORTHO05D005618 1.6e-199 700.3 700 54.7
HanXRQChr03g0068331 Helianthus annuus HOM05D000751 ORTHO05D005618 2.7e-199 699.5 736 53.1
SGA_v2.0_scaffold595G53113 Striga asiatica HOM05D000751 ORTHO05D005618 4.7e-199 698.7 573 59.7
Rhsim01G0197100 Rhododendron simsii HOM05D000751 ORTHO05D005618 2.8e-196 689.5 827 51.1
Medtr2g036890 Medicago truncatula HOM05D000751 ORTHO05D005618 2.4e-195 686.4 680 54.1
FAN12G3496 Fragaria x ananassa HOM05D000751 ORTHO05D005618 2.9e-193 679.5 784 49.9
Medtr2g012650 Medicago truncatula HOM05D000751 ORTHO05D005618 5.5e-192 675.2 676 53.3
Sopen07g005110 Solanum pennellii HOM05D000751 ORTHO05D005618 2.7e-191 672.9 692 54.3
Cc06_g21130 Coffea canephora HOM05D000751 ORTHO05D005618 2.6e-189 666.4 547 64.9
arahy.Tifrunner.gnm1.ann1.QPM7FK Arachis hypogaea HOM05D000751 ORTHO05D005618 9.1e-187 657.9 660 53.6
CDE06G1960 Ceratophyllum demersum HOM05D000751 ORTHO05D005618 1.6e-186 657.1 694 53.3
SalBow1G4534 Salvia bowleyana HOM05D000751 ORTHO05D005618 6.5e-185 651.7 574 57.5
unitig_8.g3549 Utricularia gibba HOM05D000751 ORTHO05D005618 9.1e-179 631.3 680 49.7
SalBow6G0847 Salvia bowleyana HOM05D000751 ORTHO05D005618 1.6e-178 630.6 622 53.9
AUR62014975 Chenopodium quinoa HOM05D000751 ORTHO05D005618 2.1e-175 620.2 629 53.7
Aqoxy2G02322 Aquilegia oxysepala HOM05D000751 ORTHO05D005618 1.3e-172 610.9 665 53.4
Zm00001eb406370 Zea mays HOM05D000751 ORTHO05D005618 1.8e-171 607.1 677 48.9
Oeu047314.3 Olea europaea HOM05D000751 ORTHO05D005618 3.8e-169 599.4 713 48.0
MD03G1036400 Malus domestica HOM05D000751 ORTHO05D005618 4.2e-168 595.9 584 55.7
Os05g0295100 Oryza sativa ssp. japonica HOM05D000751 ORTHO05D005618 3.0e-166 589.7 637 50.7
SalBow6G2294 Salvia bowleyana HOM05D000751 ORTHO05D005618 3.0e-166 589.7 850 44.1
COL.COLO4_25458 Corchorus olitorius HOM05D000751 ORTHO05D005618 4.9e-164 582.4 484 66.7
arahy.Tifrunner.gnm1.ann1.4Y102Q Arachis hypogaea HOM05D000751 ORTHO05D005618 1.1e-163 581.3 615 52.0
Carub.0003s1065 Capsella rubella HOM05D000751 ORTHO05D005618 2.0e-162 577.0 684 48.4
Mapoly0074s0025 Marchantia polymorpha HOM05D000751 ORTHO05D005618 3.2e-155 553.1 708 43.5
AagrBONN_evm.TU.Sc2ySwM_369.592 Anthoceros agrestis HOM05D000751 ORTHO05D005618 8.6e-153 545.0 792 42.0
Pp3c10_17670 Physcomitrium patens HOM05D000751 ORTHO05D005618 5.2e-150 535.8 762 42.4
DCAR_007396 Daucus carota HOM05D000751 ORTHO05D005618 2.0e-149 533.9 586 50.2
SMO296G0020 Selaginella moellendorffii HOM05D000751 ORTHO05D005618 1.3e-148 531.2 638 45.1
MD13G1251200 Malus domestica HOM05D000751 ORTHO05D005618 8.1e-143 511.9 378 66.4
CDE02G3188 Ceratophyllum demersum HOM05D000751 ORTHO05D005618 1.4e-142 511.1 379 66.5
CBR_g38171 Chara braunii HOM05D000751 ORTHO05D005618 5.4e-139 499.2 656 43.4
Aqoxy1G02673 Aquilegia oxysepala HOM05D000751 ORTHO05D005618 3.9e-137 493.0 536 53.2
Glyma.15G163800 Glycine max HOM05D000751 ORTHO05D005618 5.6e-136 489.2 401 61.1
SalBow6G6994 Salvia bowleyana HOM05D000751 ORTHO05D005618 1.1e-126 458.4 704 41.6
Cc10_g11360 Coffea canephora HOM05D000751 ORTHO05D005618 7.6e-125 452.2 685 43.6
SEGI_35111 Sequoiadendron giganteum HOM05D000751 ORTHO05D005618 1.4e-115 421.4 296 67.2
AUR62030665 Chenopodium quinoa HOM05D000751 ORTHO05D005618 3.2e-115 420.2 325 63.1
CAN.G193.38 Capsicum annuum HOM05D000751 ORTHO05D005618 2.5e-112 410.6 345 60.0
CAN.G266.4 Capsicum annuum HOM05D000751 ORTHO05D005618 5.6e-112 409.5 310 64.2
Dinv26447 Davidia involucrata HOM05D000751 ORTHO05D005618 1.3e-111 408.3 448 53.3
HPP92_028564 Vanilla planifolia HOM05D000751 ORTHO05D005618 4.5e-109 399.8 330 59.1
Hma1.2p1_0909F.1_g235820 Hydrangea macrophylla HOM05D000751 ORTHO05D005618 4.2e-99 366.7 551 44.5
MCO16G456 Micromonas commoda HOM05D000751 ORTHO05D005618 9.7e-96 355.5 521 38.6
SMO174G0270 Selaginella moellendorffii HOM05D000751 ORTHO05D005618 6.3e-95 352.8 495 41.2
Cre04.g218300 Chlamydomonas reinhardtii HOM05D000751 ORTHO05D005618 2.0e-93 347.8 440 42.5
BcaB05g23995 Brassica carinata HOM05D000751 ORTHO05D005618 2.2e-87 327.8 515 39.0
BolC2t08163H Brassica oleracea HOM05D000751 ORTHO05D005618 2.6e-85 320.9 352 51.1
Cfa022413 Carpinus fangiana HOM05D000751 ORTHO05D005618 7.9e-82 309.3 759 31.9
Psat4g182200 Pisum sativum HOM05D000751 ORTHO05D005618 2.8e-79 300.8 300 54.3
Ca_05496_v3 Cicer arietinum L. HOM05D000751 ORTHO05D005618 1.4e-70 271.9 325 48.3
HPP92_003076 Vanilla planifolia HOM05D000751 ORTHO05D005618 9.4e-67 259.2 207 62.8
PRCOL_00003641 Prasinoderma coloniale HOM05D000751 ORTHO05D005618 3.6e-66 257.3 562 32.4
Cc06_g21120 Coffea canephora HOM05D000751 ORTHO05D005618 1.1e-62 245.7 156 77.6
Solyc07g009350.4 Solanum lycopersicum HOM05D000751 ORTHO05D005618 6.5e-60 236.5 364 43.7
Nn2g10858 Nelumbo nucifera HOM05D000751 ORTHO05D005618 9.4e-59 232.6 154 72.1
SEGI_01124 Sequoiadendron giganteum HOM05D000751 ORTHO05D005618 1.6e-58 231.9 147 74.8
AUR62024882 Chenopodium quinoa HOM05D000751 ORTHO05D005618 5.2e-57 226.9 208 51.0
arahy.Tifrunner.gnm1.ann1.EK4LKE Arachis hypogaea HOM05D000751 ORTHO05D005618 1.4e-54 218.8 147 71.4
Medtr8g466490 Medicago truncatula HOM05D000751 ORTHO05D005618 1.2e-53 215.7 301 41.2
Psat4g047120 Pisum sativum HOM05D000751 ORTHO05D005618 4.5e-53 213.8 198 56.6
HPP92_028565 Vanilla planifolia HOM05D000751 ORTHO05D005618 3.8e-52 210.7 134 72.4
Haze_19748 Corylus avellana HOM05D000751 ORTHO05D005618 6.6e-52 209.9 347 39.8
MD13G1251100 Malus domestica HOM05D000751 ORTHO05D005618 1.3e-47 195.7 363 39.1
CAN.G266.3 Capsicum annuum HOM05D000751 ORTHO05D005618 3.7e-47 194.1 235 49.4
Medtr4g415340 Medicago truncatula HOM05D000751 ORTHO05D005618 1.0e-44 186.0 301 40.2
SEGI_01043 Sequoiadendron giganteum HOM05D000751 ORTHO05D005618 3.3e-43 181.0 195 49.7
COL.COLO4_25459 Corchorus olitorius HOM05D000751 ORTHO05D005618 4.7e-42 177.2 119 76.5
BcaC03g14585 Brassica carinata HOM05D000751 ORTHO05D005618 1.0e-41 176.0 282 43.6
Medtr8g466500 Medicago truncatula HOM05D000751 ORTHO05D005618 1.1e-38 166.0 321 37.4
Hma1.2p1_2432F.1_g322050 Hydrangea macrophylla HOM05D000751 ORTHO05D005618 1.1e-35 156.0 274 41.6
Sabra15G0073700 Salix brachista HOM05D000810 ORTHO05D005618 2.0e-32 145.2 286 35.0
Aqoxy3G01439 Aquilegia oxysepala HOM05D000751 ORTHO05D005618 3.4e-32 144.4 107 66.4
Nn2g10857 Nelumbo nucifera HOM05D000751 ORTHO05D005618 1.9e-30 138.7 84 77.4
Sc06g0007910 Simmondsia chinensis HOM05D000751 ORTHO05D005618 5.4e-30 137.1 261 39.5
Psat4g182280 Pisum sativum HOM05D000751 ORTHO05D005618 6.6e-28 130.2 83 72.3
Gorai.003G081200 Gossypium raimondii HOM05D000751 ORTHO05D005618 8.6e-28 129.8 70 90.0
CAN.G101.3 Capsicum annuum HOM05D000751 ORTHO05D005618 1.8e-25 122.1 105 61.9
Hma1.2p1_2432F.1_g322060 Hydrangea macrophylla HOM05D000751 ORTHO05D005618 1.7e-23 115.5 85 67.1
Aqoxy2G02180 Aquilegia oxysepala HOM05D000751 ORTHO05D005618 1.4e-22 112.5 103 55.3
SEGI_01614 Sequoiadendron giganteum HOM05D000751 ORTHO05D005618 2.4e-22 111.7 88 56.8
Sopen07g005100 Solanum pennellii HOM05D000002 ORTHO05D000001 4.6e-21 107.5 70 74.3
Aqoxy125s004 Aquilegia oxysepala HOM05D000751 ORTHO05D005618 3.2e-14 84.7 100 47.0
Aqoxy1G02674 Aquilegia oxysepala HOM05D000751 ORTHO05D005618 3.6e-10 71.2 97 41.2
Hma1.2p1_2432F.1_g322070 Hydrangea macrophylla HOM05D000751 ORTHO05D005618 4.8e-10 70.9 94 45.7
HPP92_003077 Vanilla planifolia HOM05D000751 ORTHO05D005618 4.8e-10 70.9 81 44.4
Rhsim03G0091700 Rhododendron simsii HOM05D000751 ORTHO05D340051 9.9e-08 63.2 104 38.5
Cpa.g.sc86.29 Carica papaya HOM05D000751 ORTHO05D005618 4.9e-07 60.8 118 39.0


User provided reference genes

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