Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib168G0975 Durio zibethinus HOM05D005951 ORTHO05D007025 1.2e-129 466.5 234 100.0
Gorai.009G038100 Gossypium raimondii HOM05D005951 ORTHO05D007025 1.4e-125 453.0 234 97.0
Gohir.D05G037600 Gossypium hirsutum HOM05D005951 ORTHO05D007025 5.9e-124 447.6 234 96.2
Gohir.A05G036100 Gossypium hirsutum HOM05D005951 ORTHO05D007025 6.6e-123 444.1 242 93.4
Thecc.09G070300 Theobroma cacao HOM05D005951 ORTHO05D007025 5.6e-122 441.0 234 95.3
Duzib150G0422 Durio zibethinus HOM05D005951 ORTHO05D007025 2.1e-121 439.1 235 94.9
Cpa.g.sc82.63 Carica papaya HOM05D005951 ORTHO05D007025 6.8e-120 434.1 238 91.2
Atru.chr7.1767 Acer truncatum HOM05D005951 ORTHO05D007025 2.6e-119 432.2 234 91.9
COL.COLO4_21208 Corchorus olitorius HOM05D005951 ORTHO05D007025 1.3e-118 429.9 234 93.2
Potri.006G136500 Populus trichocarpa HOM05D005951 ORTHO05D007025 8.3e-118 427.2 236 90.7
QL11p002956 Quercus lobata HOM05D005951 ORTHO05D007025 1.1e-117 426.8 234 91.0
TAR383G1060 Trochodendron aralioides HOM05D005951 ORTHO05D007025 2.4e-117 425.6 234 91.0
CSS0032580 Camellia sinensis var. sinensis HOM05D005951 ORTHO05D007025 4.1e-117 424.9 236 89.8
Dinv25506 Davidia involucrata HOM05D005951 ORTHO05D007025 9.2e-117 423.7 238 91.6
Sabra06G0106700 Salix brachista HOM05D005951 ORTHO05D007025 9.2e-117 423.7 236 89.8
Nn6g35632 Nelumbo nucifera HOM05D005951 ORTHO05D007025 3.5e-116 421.8 234 90.6
Manes.16G090500 Manihot esculenta HOM05D005951 ORTHO05D007025 1.7e-115 419.5 240 88.8
Cfa002937 Carpinus fangiana HOM05D005951 ORTHO05D007025 3.0e-115 418.7 234 90.2
Potri.018G063600 Populus trichocarpa HOM05D005951 ORTHO05D007025 1.1e-114 416.8 239 87.0
Aqoxy7G04154 Aquilegia oxysepala HOM05D005951 ORTHO05D007025 1.5e-114 416.4 234 88.9
CiPaw.04G140200 Carya illinoinensis HOM05D005951 ORTHO05D007025 1.9e-114 416.0 234 89.3
GSVIVG01015014001 Vitis vinifera HOM05D005951 ORTHO05D007025 3.3e-114 415.2 227 90.3
RcHm_v2.0_Chr2g0095941 Rosa chinensis HOM05D005951 ORTHO05D007025 5.6e-114 414.5 241 84.6
FAN28G0037 Fragaria x ananassa HOM05D005951 ORTHO05D007025 9.5e-114 413.7 231 87.0
FAN28G0822 Fragaria x ananassa HOM05D005951 ORTHO05D007025 9.5e-114 413.7 231 87.0
ClCG03G014750 Citrullus lanatus HOM05D005951 ORTHO05D007025 1.2e-113 413.3 234 86.8
CiPaw.03G200400 Carya illinoinensis HOM05D005951 ORTHO05D007025 1.6e-113 412.9 234 89.3
FvH4_1g09390 Fragaria vesca HOM05D005951 ORTHO05D007025 1.6e-113 412.9 231 87.0
FAN19G2090 Fragaria x ananassa HOM05D005951 ORTHO05D007025 1.6e-113 412.9 231 87.0
Actinidia39617 Actinidia chinensis HOM05D005951 ORTHO05D007025 2.1e-113 412.5 234 88.5
Manes.03G044600 Manihot esculenta HOM05D005951 ORTHO05D007025 2.1e-113 412.5 235 87.2
ATR0317G112 Amborella trichopoda HOM05D005951 ORTHO05D007025 4.7e-113 411.4 234 86.3
FAN26G0600 Fragaria x ananassa HOM05D005951 ORTHO05D007025 4.7e-113 411.4 231 86.6
FAN26G2189 Fragaria x ananassa HOM05D005951 ORTHO05D007025 4.7e-113 411.4 231 86.1
Haze_26069 Corylus avellana HOM05D005951 ORTHO05D007025 1.0e-112 410.2 249 85.5
Glyma.17G045500 Glycine max HOM05D005951 ORTHO05D007025 1.8e-112 409.5 234 87.6
MD02G1102200 Malus domestica HOM05D005951 ORTHO05D007025 4.0e-112 408.3 234 85.5
Sed0027227 Sechium edule HOM05D005951 ORTHO05D007025 6.8e-112 407.5 234 85.9
VMungo1215G3086 Vigna mungo HOM05D005951 ORTHO05D007025 6.8e-112 407.5 234 87.6
Nitab4.5_0000170g0090 Nicotiana tabacum HOM05D005951 ORTHO05D007025 8.9e-112 407.1 234 85.0
TWI34G0930 Tripterygium wilfordii HOM05D005951 ORTHO05D007025 3.4e-111 405.2 236 86.0
CsaV3_1G041410 Cucumis sativus L. HOM05D005951 ORTHO05D007025 4.4e-111 404.8 234 85.9
Lj4g0000458 Lotus japonicus HOM05D005951 ORTHO05D007025 4.4e-111 404.8 234 85.9
Eucgr.C03197 Eucalyptus grandis HOM05D005951 ORTHO05D007025 7.5e-111 404.1 224 87.1
Eucgr.L02230 Eucalyptus grandis HOM05D005951 ORTHO05D007025 7.5e-111 404.1 224 87.1
Sed0006808 Sechium edule HOM05D005951 ORTHO05D007025 1.3e-110 403.3 234 85.0
CANSAT56G0193 Cannabis sativa HOM05D005951 ORTHO05D007025 1.7e-110 402.9 239 84.5
Glyma.13G114300 Glycine max HOM05D005951 ORTHO05D007025 1.7e-110 402.9 234 87.2
Prupe.7G192100 Prunus persica HOM05D005951 ORTHO05D007025 1.7e-110 402.9 234 85.0
arahy.Tifrunner.gnm1.ann1.7AU96Q Arachis hypogaea HOM05D005951 ORTHO05D007025 2.2e-110 402.5 232 86.6
Ciclev10009369m.g Citrus clementina HOM05D005951 ORTHO05D007025 2.9e-110 402.1 234 86.8
Phvul.003G127300 Phaseolus vulgaris HOM05D005951 ORTHO05D007025 2.9e-110 402.1 234 86.8
CANSAT56G0116 Cannabis sativa HOM05D005951 ORTHO05D007025 3.7e-110 401.7 239 84.5
FAN23G1113 Fragaria x ananassa HOM05D005951 ORTHO05D007025 4.9e-110 401.4 235 83.8
Peaxi162Scf00474g00521 Petunia axillaris HOM05D005951 ORTHO05D007025 4.9e-110 401.4 225 85.8
MBI13_g01673_MAGBIO Magnolia biondii HOM05D005951 ORTHO05D007025 6.4e-110 401.0 232 85.3
arahy.Tifrunner.gnm1.ann1.JRQ3DB Arachis hypogaea HOM05D005951 ORTHO05D007025 8.3e-110 400.6 231 86.6
Lalb_Chr13g0299191 Lupinus albus HOM05D005951 ORTHO05D007025 2.4e-109 399.1 237 86.1
Lsat_1_v5_gn_5_138841 Lactuca sativa HOM05D005951 ORTHO05D007025 3.2e-109 398.7 234 82.1
Ca_21339_v3 Cicer arietinum L. HOM05D000240 ORTHO05D002721 1.2e-108 396.7 236 85.2
Cc06_g12700 Coffea canephora HOM05D005951 ORTHO05D007025 6.0e-108 394.4 233 82.8
PGSC0003DMG400013572 Solanum tuberosum HOM05D005951 ORTHO05D007025 6.0e-108 394.4 225 84.9
Medtr4g124640 Medicago truncatula HOM05D005951 ORTHO05D007025 3.0e-107 392.1 236 83.5
CAN.G54.13 Capsicum annuum HOM05D005951 ORTHO05D007025 6.6e-107 391.0 230 82.2
MD15G1223700 Malus domestica HOM05D005951 ORTHO05D007025 1.1e-106 390.2 234 82.5
Solyc07g042570.3 Solanum lycopersicum HOM05D005951 ORTHO05D007025 1.1e-106 390.2 225 84.0
DCAR_028530 Daucus carota HOM05D005951 ORTHO05D007025 1.5e-106 389.8 234 83.3
MSTRG.26500 Avicennia marina HOM05D005951 ORTHO05D007025 3.3e-106 388.7 240 80.0
Sopen07g022260 Solanum pennellii HOM05D005951 ORTHO05D007025 5.6e-106 387.9 225 83.1
Lalb_Chr07g0181411 Lupinus albus HOM05D005951 ORTHO05D007025 2.8e-105 385.6 235 83.8
Oeu041808.1 Olea europaea HOM05D005951 ORTHO05D007025 2.8e-105 385.6 239 79.5
EL10Ac8g18966 Beta vulgaris HOM05D005951 ORTHO05D007025 3.6e-105 385.2 238 80.3
TPR.G12577 Trifolium pratense HOM05D005951 ORTHO05D007025 3.6e-105 385.2 224 85.3
BraA01t00476Z Brassica rapa HOM05D000526 ORTHO05D007025 1.4e-104 383.3 234 81.6
PSO724G0923 Papaver somniferum HOM05D005951 ORTHO05D007025 1.4e-104 383.3 234 81.6
PSO135G0575 Papaver somniferum HOM05D005951 ORTHO05D007025 3.1e-104 382.1 234 81.6
HPP92_004361 Vanilla planifolia HOM05D005951 ORTHO05D007025 4.0e-104 381.7 223 83.0
BcaC01g01000 Brassica carinata HOM05D005951 ORTHO05D007025 6.8e-104 380.9 234 79.9
BolC3t20971H Brassica oleracea HOM05D005951 ORTHO05D007025 6.8e-104 380.9 234 79.9
Sp7g31000 Schrenkiella parvula HOM05D005951 ORTHO05D007025 6.8e-104 380.9 234 80.3
BraA08t33722Z Brassica rapa HOM05D005951 ORTHO05D007025 1.5e-103 379.8 235 80.0
PGR044G1586 Punica granatum HOM05D005951 ORTHO05D007025 2.0e-103 379.4 234 82.5
THA.LOC104803783 Tarenaya hassleriana HOM05D005951 ORTHO05D007025 2.6e-103 379.0 230 80.0
BcaC09g52137 Brassica carinata HOM05D005951 ORTHO05D007025 3.4e-103 378.6 234 80.8
C01p05390 Brassica napus HOM05D000526 ORTHO05D000956 3.4e-103 378.6 232 81.9
Thhalv10026154m.g Eutrema salsugineum HOM05D005951 ORTHO05D007025 3.4e-103 378.6 234 79.9
C03p86770 Brassica napus HOM05D005951 ORTHO05D007025 4.4e-103 378.3 235 80.0
Migut.J00881 Erythranthe guttata HOM05D005951 ORTHO05D007025 4.4e-103 378.3 240 78.8
SGA_v2.0_scaffold55G19875 Striga asiatica HOM05D005951 ORTHO05D007025 4.4e-103 378.3 238 81.1
ECA234G1587 Erigeron canadensis HOM05D005951 ORTHO05D007025 7.5e-103 377.5 234 78.6
AUR62028321 Chenopodium quinoa HOM05D005951 ORTHO05D007025 1.7e-102 376.3 220 82.3
BcaB03g12809 Brassica carinata HOM05D005951 ORTHO05D007025 3.7e-102 375.2 234 77.8
CDE07G2051 Ceratophyllum demersum HOM05D005951 ORTHO05D007025 3.7e-102 375.2 235 80.0
AL7G18300 Arabidopsis lyrata HOM05D005951 ORTHO05D007025 4.9e-102 374.8 234 79.5
BolC1t00519H Brassica oleracea HOM05D000526 ORTHO05D007025 6.4e-102 374.4 232 81.0
A08p17720 Brassica napus HOM05D005951 ORTHO05D007025 1.1e-101 373.6 230 80.4
Carub.0007s0721 Capsella rubella HOM05D005951 ORTHO05D007025 1.1e-101 373.6 234 79.1
Aa31LG5G9380 Aethionema arabicum HOM05D005951 ORTHO05D007025 3.2e-101 372.1 229 80.8
HanXRQChr10g0319821 Helianthus annuus HOM05D005951 ORTHO05D007025 5.4e-101 371.3 227 81.5
Os03g0182700 Oryza sativa ssp. japonica HOM05D005951 ORTHO05D007025 7.1e-101 370.9 225 80.4
Zm00001eb401690 Zea mays HOM05D005951 ORTHO05D007025 7.1e-101 370.9 225 80.9
SEGI_21232 Sequoiadendron giganteum HOM05D005951 ORTHO05D007025 2.3e-99 365.9 233 76.8
MELO3C015553.2 Cucumis melo HOM05D005951 ORTHO05D007025 5.1e-99 364.8 234 79.9
AT4G33250 Arabidopsis thaliana HOM05D005951 ORTHO05D007025 1.1e-98 363.6 234 78.2
vmacro17078 Vaccinium macrocarpon HOM05D005951 ORTHO05D007025 3.3e-98 362.1 329 62.9
A03p61920 Brassica napus HOM05D000526 ORTHO05D007025 4.3e-98 361.7 258 71.7
Oeu000276.3 Olea europaea HOM05D005951 ORTHO05D007025 1.1e-96 357.1 304 62.5
MBI19_g36230_MAGBIO Magnolia biondii HOM05D005951 ORTHO05D007025 1.8e-96 356.3 234 79.9
Lj7C692T6 Lonicera japonica HOM05D005951 ORTHO05D007025 5.2e-96 354.8 224 79.9
Nitab4.5_0003139g0080 Nicotiana tabacum HOM05D005951 ORTHO05D007025 4.4e-95 351.7 234 76.1
unitig_899.g15181 Utricularia gibba HOM05D005951 ORTHO05D007025 1.4e-93 346.7 226 73.0
Mapoly0073s0056 Marchantia polymorpha HOM05D005951 ORTHO05D007025 9.2e-93 344.0 223 72.6
Actinidia30258 Actinidia chinensis HOM05D005951 ORTHO05D007025 1.6e-92 343.2 187 89.8
C07p59570 Brassica napus HOM05D005951 ORTHO05D007025 7.8e-92 340.9 234 74.4
BcaNung02163 Brassica carinata HOM05D005951 ORTHO05D007025 3.9e-91 338.6 234 73.1
Hund26110 Selenicereus undatus HOM05D005951 ORTHO05D007025 8.6e-91 337.4 225 74.2
Rhsim05G0002100 Rhododendron simsii HOM05D005951 ORTHO05D007025 3.6e-89 332.0 234 74.4
BraA03t15230Z Brassica rapa HOM05D005951 ORTHO05D007025 8.4e-86 320.9 193 80.8
AUR62025338 Chenopodium quinoa HOM05D005951 ORTHO05D007025 1.4e-85 320.1 188 80.9
Pp3c18_14720 Physcomitrium patens HOM05D005951 ORTHO05D007025 1.4e-85 320.1 220 68.6
Zm00001eb401710 Zea mays HOM05D005951 ORTHO05D007025 1.4e-85 320.1 198 78.8
Pp3c21_14860 Physcomitrium patens HOM05D005951 ORTHO05D007025 3.2e-85 318.9 220 67.7
SMO239G0051 Selaginella moellendorffii HOM05D005951 ORTHO05D007025 2.1e-84 316.2 229 64.2
CDE06G1359 Ceratophyllum demersum HOM05D005951 ORTHO05D007025 1.1e-82 310.5 199 79.9
BolC7t46402H Brassica oleracea HOM05D005951 ORTHO05D007025 5.6e-74 281.6 197 72.1
Zm00001eb006150 Zea mays HOM05D005951 ORTHO05D007025 3.6e-73 278.9 168 79.8
Sc08g0009170 Simmondsia chinensis HOM05D005951 ORTHO05D007025 2.7e-68 262.7 162 82.7
Migut.L01596 Erythranthe guttata HOM05D005951 ORTHO05D007025 2.5e-66 256.1 236 59.3
AagrBONN_evm.TU.Sc2ySwM_117.912 Anthoceros agrestis HOM05D005951 ORTHO05D007025 4.8e-57 225.3 159 67.9
CBR_g16046 Chara braunii HOM05D005951 ORTHO05D007025 9.0e-56 221.1 218 51.4
CARHR241300 Cardamine hirsuta HOM05D005951 ORTHO05D007025 7.2e-45 184.9 119 72.3
SalBow6G6500 Salvia bowleyana HOM05D005951 ORTHO05D007025 2.6e-39 166.4 105 81.9
Cre12.g515650 Chlamydomonas reinhardtii HOM05D005951 ORTHO05D007025 3.9e-35 152.5 190 37.9
MD02G1101200 Malus domestica HOM05D005951 ORTHO05D007025 2.6e-31 139.8 97 77.3
PRCOL_00003879 Prasinoderma coloniale HOM05D005951 ORTHO05D007025 3.1e-24 116.3 209 33.5
ATR0705G105 Amborella trichopoda HOM05D005951 ORTHO05D007025 3.0e-11 73.2 41 75.6


User provided reference genes

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