Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib168G0692 Durio zibethinus HOM05D007144 ORTHO05D008709 1.5e-43 179.9 150 100.0
COL.COLO4_35678 Corchorus olitorius HOM05D007144 ORTHO05D008709 2.3e-28 129.4 185 49.2
Dinv36172 Davidia involucrata HOM05D007144 ORTHO05D008709 1.1e-25 120.6 96 68.8
Thecc.09G249300 Theobroma cacao HOM05D007144 ORTHO05D008709 2.6e-24 115.9 74 86.5
Gohir.D07G124200 Gossypium hirsutum HOM05D007144 ORTHO05D008709 2.9e-23 112.5 153 79.7
Gorai.001G134000 Gossypium raimondii HOM05D007144 ORTHO05D008709 2.9e-23 112.5 153 79.7
Duzib150G1568 Durio zibethinus HOM05D007144 ORTHO05D008709 4.2e-22 108.6 68 88.2
Cc11_g02820 Coffea canephora HOM05D007144 ORTHO05D008709 1.0e-20 104.0 87 67.8
CiPaw.13G151300 Carya illinoinensis HOM05D007144 ORTHO05D008709 1.5e-19 100.1 73 74.0
Gohir.A07G120000 Gossypium hirsutum HOM05D007144 ORTHO05D008709 9.7e-19 97.4 153 75.8
CSS0000717 Camellia sinensis var. sinensis HOM05D007144 ORTHO05D008709 1.6e-18 96.7 67 77.6
Atru.chr4.1901 Acer truncatum HOM05D007144 ORTHO05D008709 2.8e-18 95.9 86 66.3
Nitab4.5_0003882g0010 Nicotiana tabacum HOM05D007144 ORTHO05D008709 3.7e-18 95.5 72 72.2
Nitab4.5_0000129g0400 Nicotiana tabacum HOM05D007144 ORTHO05D008709 1.8e-17 93.2 72 72.2
SalBow5G2023 Salvia bowleyana HOM05D007144 ORTHO05D008709 2.4e-17 92.8 79 65.8
Atru.chr3.2764 Acer truncatum HOM05D007144 ORTHO05D008709 6.9e-17 91.3 73 75.3
Solyc04g008580.3 Solanum lycopersicum HOM05D007144 ORTHO05D008709 6.9e-17 91.3 72 68.1
Sopen04g003740 Solanum pennellii HOM05D007144 ORTHO05D008709 6.9e-17 91.3 75 65.3
PGSC0003DMG400031376 Solanum tuberosum HOM05D007144 ORTHO05D008709 6.9e-17 91.3 75 65.3
Peaxi162Scf00329g00929 Petunia axillaris HOM05D007144 ORTHO05D008709 9.0e-17 90.9 72 68.1
HPP92_013978 Vanilla planifolia HOM05D007144 ORTHO05D008709 2.0e-16 89.7 86 60.5
Potri.009G070700 Populus trichocarpa HOM05D007144 ORTHO05D008709 2.6e-16 89.4 72 72.2
Sc06g0004670 Simmondsia chinensis HOM05D007144 ORTHO05D008709 3.4e-16 89.0 98 56.1
THA.LOC104799122 Tarenaya hassleriana HOM05D007144 ORTHO05D008709 3.4e-16 89.0 80 63.8
Potri.001G276100 Populus trichocarpa HOM05D007144 ORTHO05D008709 4.5e-16 88.6 71 73.2
SalBow5G2895 Salvia bowleyana HOM05D007144 ORTHO05D008709 7.6e-16 87.8 76 64.5
CAN.G880.2 Capsicum annuum HOM05D007144 ORTHO05D008709 1.0e-15 87.4 72 65.3
Haze_23224 Corylus avellana HOM05D007144 ORTHO05D008709 1.0e-15 87.4 64 75.0
TAR369G0480 Trochodendron aralioides HOM05D007144 ORTHO05D008709 1.0e-15 87.4 73 69.9
MBI13_g27793_MAGBIO Magnolia biondii HOM05D007144 ORTHO05D008709 1.3e-15 87.0 71 66.2
Actinidia06960 Actinidia chinensis HOM05D007144 ORTHO05D008709 2.2e-15 86.3 61 75.4
arahy.Tifrunner.gnm1.ann1.A9WCXI Arachis hypogaea HOM05D007144 ORTHO05D008709 2.9e-15 85.9 74 66.2
Prupe.4G267400 Prunus persica HOM05D007144 ORTHO05D008709 2.9e-15 85.9 154 69.5
unitig_749.g14354 Utricularia gibba HOM05D007144 ORTHO05D008709 2.9e-15 85.9 103 50.5
Sabra09G0053500 Salix brachista HOM05D007144 ORTHO05D008709 8.5e-15 84.3 71 69.0
Cfa010657 Carpinus fangiana HOM05D007144 ORTHO05D008709 1.1e-14 84.0 64 71.9
Haze_03594 Corylus avellana HOM05D007144 ORTHO05D008709 1.1e-14 84.0 64 71.9
Ah.06g194530 Amaranthus hybridus HOM05D007144 ORTHO05D008709 1.4e-14 83.6 78 65.4
HanXRQChr17g0535301 Helianthus annuus HOM05D007144 ORTHO05D008709 1.4e-14 83.6 71 66.2
Cpa.g.sc482.3 Carica papaya HOM05D007144 ORTHO05D008709 1.9e-14 83.2 67 71.6
Aqoxy1G00362 Aquilegia oxysepala HOM05D007144 ORTHO05D008709 3.2e-14 82.4 70 65.7
MD03G1167000 Malus domestica HOM05D007144 ORTHO05D008709 4.2e-14 82.0 85 58.8
Lsat_1_v5_gn_2_34061 Lactuca sativa HOM05D007144 ORTHO05D008709 5.5e-14 81.6 68 66.2
ATR0745G069 Amborella trichopoda HOM05D007144 ORTHO05D008709 7.2e-14 81.3 66 63.6
Hund07439 Selenicereus undatus HOM05D007144 ORTHO05D008709 1.2e-13 80.5 72 66.7
arahy.Tifrunner.gnm1.ann1.FNNB0Q Arachis hypogaea HOM05D007144 ORTHO05D008709 1.6e-13 80.1 68 67.6
arahy.Tifrunner.gnm1.ann1.J3HRR4 Arachis hypogaea HOM05D007144 ORTHO05D008709 1.6e-13 80.1 68 67.6
EL10Ac4g10148 Beta vulgaris HOM05D007144 ORTHO05D008709 1.6e-13 80.1 72 65.3
Medtr3g088410 Medicago truncatula HOM05D007144 ORTHO05D008709 1.6e-13 80.1 71 66.2
TPR.G13466 Trifolium pratense HOM05D007144 ORTHO05D008709 2.7e-13 79.3 70 64.3
TAR623G0360 Trochodendron aralioides HOM05D007144 ORTHO05D008709 4.6e-13 78.6 65 70.8
AL6G23120 Arabidopsis lyrata HOM05D007144 ORTHO05D008709 6.1e-13 78.2 72 65.3
ClCG02G022890 Citrullus lanatus HOM05D007144 ORTHO05D008709 6.1e-13 78.2 162 64.8
RcHm_v2.0_Chr3g0485011 Rosa chinensis HOM05D007144 ORTHO05D008709 6.1e-13 78.2 70 64.3
DCAR_023846 Daucus carota HOM05D007144 ORTHO05D008709 7.9e-13 77.8 70 62.9
Ciclev10017489m.g Citrus clementina HOM05D007144 ORTHO05D008709 1.0e-12 77.4 64 65.6
Thhalv10014957m.g Eutrema salsugineum HOM05D007144 ORTHO05D008709 1.8e-12 76.6 66 69.7
CDE04G3392 Ceratophyllum demersum HOM05D000144 ORTHO05D007336 2.3e-12 76.3 77 55.8
AT5G12320 Arabidopsis thaliana HOM05D007144 ORTHO05D008709 3.0e-12 75.9 72 62.5
Migut.O00557 Erythranthe guttata HOM05D007144 ORTHO05D008709 3.0e-12 75.9 156 64.1
SGA_v2.0_scaffold43G16444 Striga asiatica HOM05D007144 ORTHO05D008709 3.0e-12 75.9 71 59.2
Lj6g0012120 Lotus japonicus HOM05D007144 ORTHO05D008709 3.9e-12 75.5 62 69.4
Manes.02G140201 Manihot esculenta HOM05D007144 ORTHO05D008709 3.9e-12 75.5 66 69.7
Sp6g31320 Schrenkiella parvula HOM05D007144 ORTHO05D008709 3.9e-12 75.5 65 72.3
Ca_03986_v3 Cicer arietinum L. HOM05D007144 ORTHO05D008709 5.1e-12 75.1 53 73.6
FvH4_1g25870 Fragaria vesca HOM05D007144 ORTHO05D008709 6.7e-12 74.7 58 67.2
FAN23G1846 Fragaria x ananassa HOM05D007144 ORTHO05D008709 6.7e-12 74.7 58 67.2
Carub.0006s1083 Capsella rubella HOM05D007144 ORTHO05D008709 8.8e-12 74.3 60 68.3
CARHR200790 Cardamine hirsuta HOM05D007144 ORTHO05D008709 8.8e-12 74.3 59 71.2
ECA236G5047 Erigeron canadensis HOM05D007144 ORTHO05D008709 8.8e-12 74.3 78 55.1
FAN19G1536 Fragaria x ananassa HOM05D007144 ORTHO05D008709 8.8e-12 74.3 58 67.2
Hma1.2p1_0842F.1_g227150 Hydrangea macrophylla HOM05D007144 ORTHO05D008709 8.8e-12 74.3 65 64.6
AUR62006537 Chenopodium quinoa HOM05D007144 ORTHO05D008709 1.1e-11 73.9 70 65.7
CsaV3_6G039020 Cucumis sativus L. HOM05D007144 ORTHO05D008709 1.1e-11 73.9 71 59.2
FAN26G3363 Fragaria x ananassa HOM05D007144 ORTHO05D008709 1.5e-11 73.6 58 65.5
Rhsim13G0210700 Rhododendron simsii HOM05D007144 ORTHO05D008709 4.3e-11 72.0 62 69.4
Zm00001eb329760 Zea mays HOM05D007144 ORTHO05D008709 5.7e-11 71.6 73 56.2
Ca_12164_v3 Cicer arietinum L. HOM05D007144 ORTHO05D008709 7.4e-11 71.2 64 64.1
C09p64580 Brassica napus HOM05D007144 ORTHO05D008709 9.7e-11 70.9 69 62.3
BolC9t59291H Brassica oleracea HOM05D007144 ORTHO05D008709 9.7e-11 70.9 69 62.3
BraA10t44614Z Brassica rapa HOM05D007144 ORTHO05D008709 9.7e-11 70.9 69 62.3
AUR62000186 Chenopodium quinoa HOM05D007144 ORTHO05D008709 9.7e-11 70.9 67 65.7
A10p25500 Brassica napus HOM05D007144 ORTHO05D008709 1.3e-10 70.5 66 63.6
Glyma.08G150200 Glycine max HOM05D007144 ORTHO05D008709 1.7e-10 70.1 65 64.6
MD11G1186200 Malus domestica HOM05D007144 ORTHO05D008709 2.8e-10 69.3 54 70.4
MELO3C014563.2 Cucumis melo HOM05D007144 ORTHO05D008709 4.8e-10 68.6 68 57.4
Manes.01G179700 Manihot esculenta HOM05D007144 ORTHO05D008709 6.3e-10 68.2 64 65.6
Sed0028076 Sechium edule HOM05D007144 ORTHO05D008709 1.4e-09 67.0 55 67.3
QL01p017309 Quercus lobata HOM05D007144 ORTHO05D008709 1.8e-09 66.6 98 87.8
Aa31LG3G14910 Aethionema arabicum HOM05D007144 ORTHO05D008709 1.2e-08 63.9 48 72.9
Eucgr.B03730 Eucalyptus grandis HOM05D007144 ORTHO05D008709 1.5e-08 63.5 62 54.8
Psat1g051560 Pisum sativum HOM05D007144 ORTHO05D008709 4.5e-08 62.0 61 62.3
TWI23G1223 Tripterygium wilfordii HOM05D007144 ORTHO05D008709 7.7e-08 61.2 59 61.0
FAN28G1393 Fragaria x ananassa HOM05D007144 ORTHO05D008709 2.9e-07 59.3 35 74.3
CANSAT54G2482 Cannabis sativa HOM05D007144 ORTHO05D008709 6.5e-07 58.2 65 58.5
CBR_g48945 Chara braunii HOM05D007144 ORTHO05D008709 4.2e-06 55.5 82 42.7
Phvul.006G021300 Phaseolus vulgaris HOM05D007144 ORTHO05D008709 4.2e-06 55.5 41 70.7
Nn7g36693 Nelumbo nucifera HOM05D007144 ORTHO05D008709 5.5e-06 55.1 49 63.3
PGR102G1924 Punica granatum HOM05D007144 ORTHO05D008709 5.5e-06 55.1 58 53.4


User provided reference genes

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