Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib168G0293 Durio zibethinus HOM05D007055 ORTHO05D008943 1.5e-75 286.2 158 100.0
Thecc.09G245700 Theobroma cacao HOM05D007055 ORTHO05D008943 1.5e-54 216.5 156 82.1
Gohir.D05G076400 Gossypium hirsutum HOM05D007055 ORTHO05D008943 1.2e-51 206.8 158 77.8
Gohir.A05G073500 Gossypium hirsutum HOM05D007055 ORTHO05D008943 7.7e-51 204.1 158 79.1
Gorai.009G077700 Gossypium raimondii HOM05D007055 ORTHO05D008943 1.7e-50 203.0 141 82.3
COL.COLO4_07385 Corchorus olitorius HOM05D007055 ORTHO05D008943 6.5e-50 201.1 147 81.0
Duzib150G0143 Durio zibethinus HOM05D007055 ORTHO05D008943 8.8e-39 164.1 151 68.2
arahy.Tifrunner.gnm1.ann1.FS1PG6 Arachis hypogaea HOM05D007055 ORTHO05D008943 9.5e-33 144.1 117 67.5
Atru.chr12.2186 Acer truncatum HOM05D007055 ORTHO05D008943 1.2e-32 143.7 143 62.2
Manes.06G171200 Manihot esculenta HOM05D007055 ORTHO05D008943 1.6e-32 143.3 149 60.4
arahy.Tifrunner.gnm1.ann1.4D1XNM Arachis hypogaea HOM05D007055 ORTHO05D008943 2.1e-32 142.9 128 64.1
Potri.011G144400 Populus trichocarpa HOM05D007055 ORTHO05D008943 2.8e-32 142.5 138 58.7
Ciclev10022701m.g Citrus clementina HOM05D007055 ORTHO05D008943 3.6e-32 142.1 154 60.4
CSS0027098 Camellia sinensis var. sinensis HOM05D007055 ORTHO05D008943 6.1e-32 141.4 125 60.8
PSO541G2194 Papaver somniferum HOM05D007055 ORTHO05D008943 6.1e-32 141.4 155 54.8
Sabra11G0128800 Salix brachista HOM05D007055 ORTHO05D008943 6.1e-32 141.4 95 77.9
PSO675G8693 Papaver somniferum HOM05D007055 ORTHO05D008943 1.0e-31 140.6 124 61.3
Manes.06G170400 Manihot esculenta HOM05D007055 ORTHO05D008943 2.3e-31 139.4 154 58.4
Ca_03690_v3 Cicer arietinum L. HOM05D007055 ORTHO05D008943 3.0e-31 139.0 155 58.1
Actinidia07345 Actinidia chinensis HOM05D007055 ORTHO05D008943 5.2e-31 138.3 102 72.5
Sed0014529 Sechium edule HOM05D007055 ORTHO05D008943 5.2e-31 138.3 145 57.9
Potri.008G043200 Populus trichocarpa HOM05D007055 ORTHO05D008943 6.8e-31 137.9 126 64.3
Cfa019436 Carpinus fangiana HOM05D007055 ORTHO05D008943 8.9e-31 137.5 111 67.6
Lalb_Chr25g0285111 Lupinus albus HOM05D007055 ORTHO05D008943 1.5e-30 136.7 137 60.6
CANSAT56G2639 Cannabis sativa HOM05D007055 ORTHO05D008943 2.0e-30 136.3 119 63.0
FvH4_3g16000 Fragaria vesca HOM05D007055 ORTHO05D008943 2.0e-30 136.3 137 56.9
ClCG11G016330 Citrullus lanatus HOM05D007055 ORTHO05D008943 3.4e-30 135.6 157 53.5
RcHm_v2.0_Chr5g0026941 Rosa chinensis HOM05D007055 ORTHO05D008943 4.4e-30 135.2 127 59.1
MELO3C010559.2 Cucumis melo HOM05D007055 ORTHO05D008943 5.7e-30 134.8 142 57.0
Lj3g0013500 Lotus japonicus HOM05D007055 ORTHO05D008943 5.7e-30 134.8 138 60.1
PGR031G2131 Punica granatum HOM05D007055 ORTHO05D008943 5.7e-30 134.8 155 54.2
CiPaw.12G045200 Carya illinoinensis HOM05D007055 ORTHO05D008943 7.5e-30 134.4 149 57.7
Glyma.08G173000 Glycine max HOM05D007055 ORTHO05D008943 7.5e-30 134.4 119 65.5
Hma1.2p1_0151F.1_g066890 Hydrangea macrophylla HOM05D007055 ORTHO05D008943 7.5e-30 134.4 109 67.0
Aqoxy1G01599 Aquilegia oxysepala HOM05D007055 ORTHO05D008943 9.8e-30 134.0 112 67.9
CsaV3_4G031800 Cucumis sativus L. HOM05D007055 ORTHO05D008943 9.8e-30 134.0 155 51.6
Lj5A202T45 Lonicera japonica HOM05D007055 ORTHO05D008943 9.8e-30 134.0 95 72.6
MD05G1216100 Malus domestica HOM05D007055 ORTHO05D008943 1.7e-29 133.3 107 68.2
ATR1098G113 Amborella trichopoda HOM05D007055 ORTHO05D008943 2.9e-29 132.5 114 60.5
ECA240G0655 Erigeron canadensis HOM05D007055 ORTHO05D008943 2.9e-29 132.5 110 64.5
FAN11G2295 Fragaria x ananassa HOM05D007055 ORTHO05D008943 2.9e-29 132.5 125 59.2
FAN21G0096 Fragaria x ananassa HOM05D007055 ORTHO05D008943 2.9e-29 132.5 125 59.2
Medtr2g069750 Medicago truncatula HOM05D007055 ORTHO05D008943 2.9e-29 132.5 140 60.7
Phvul.005G056000 Phaseolus vulgaris HOM05D007055 ORTHO05D008943 2.9e-29 132.5 127 62.2
Rhsim06G0238300 Rhododendron simsii HOM05D007055 ORTHO05D008943 6.4e-29 131.3 123 60.2
TWI38G0074 Tripterygium wilfordii HOM05D007055 ORTHO05D008943 6.4e-29 131.3 155 56.1
FAN16G3461 Fragaria x ananassa HOM05D007055 ORTHO05D008943 1.1e-28 130.6 125 58.4
FAN21G3903 Fragaria x ananassa HOM05D007055 ORTHO05D008943 1.1e-28 130.6 125 58.4
Glyma.15G254500 Glycine max HOM05D007055 ORTHO05D008943 3.2e-28 129.0 135 59.3
Psat1g002720 Pisum sativum HOM05D007055 ORTHO05D008943 4.1e-28 128.6 144 59.7
Sopen07g034550 Solanum pennellii HOM05D007055 ORTHO05D008943 5.4e-28 128.3 122 61.5
MBI18_g28200_MAGBIO Magnolia biondii HOM05D007055 ORTHO05D008943 9.2e-28 127.5 96 71.9
Solyc07g066370.3 Solanum lycopersicum HOM05D007055 ORTHO05D008943 9.2e-28 127.5 127 59.1
Sc03g0007920 Simmondsia chinensis HOM05D007055 ORTHO05D008943 1.2e-27 127.1 121 60.3
TAR627G0757 Trochodendron aralioides HOM05D007055 ORTHO05D008943 1.2e-27 127.1 150 52.7
Thhalv10019307m.g Eutrema salsugineum HOM05D007055 ORTHO05D008943 2.0e-27 126.3 114 59.6
Lsat_1_v5_gn_7_72120 Lactuca sativa HOM05D007055 ORTHO05D008943 2.0e-27 126.3 142 54.9
AT1G79070 Arabidopsis thaliana HOM05D007055 ORTHO05D008943 3.5e-27 125.6 103 62.1
CARHR072740 Cardamine hirsuta HOM05D007055 ORTHO05D008943 3.5e-27 125.6 111 62.2
AL2G39530 Arabidopsis lyrata HOM05D007055 ORTHO05D008943 4.6e-27 125.2 109 61.5
BolC6t40312H Brassica oleracea HOM05D007055 ORTHO05D008943 5.9e-27 124.8 109 60.6
BcaB02g08664 Brassica carinata HOM05D007055 ORTHO05D008943 7.8e-27 124.4 123 56.1
Hund02291 Selenicereus undatus HOM05D007055 ORTHO05D008943 7.8e-27 124.4 122 58.2
BcaC08g47470 Brassica carinata HOM05D007055 ORTHO05D008943 1.7e-26 123.2 109 59.6
Nn7g37868 Nelumbo nucifera HOM05D007055 ORTHO05D008943 1.7e-26 123.2 136 54.4
DCAR_013747 Daucus carota HOM05D007055 ORTHO05D008943 3.0e-26 122.5 145 54.5
PGSC0003DMG400022130 Solanum tuberosum HOM05D007055 ORTHO05D008943 3.0e-26 122.5 130 57.7
A07p44210 Brassica napus HOM05D007055 ORTHO05D008943 3.9e-26 122.1 116 56.9
C06p52940 Brassica napus HOM05D007055 ORTHO05D008943 3.9e-26 122.1 91 67.0
Manes.06G170801 Manihot esculenta HOM05D007055 ORTHO05D008943 3.9e-26 122.1 94 72.3
Carub.0002s2594 Capsella rubella HOM05D007055 ORTHO05D008943 5.0e-26 121.7 109 59.6
Peaxi162Scf00232g01121 Petunia axillaris HOM05D007055 ORTHO05D008943 5.0e-26 121.7 136 51.5
Ah.06g187070 Amaranthus hybridus HOM05D007055 ORTHO05D008943 8.6e-26 120.9 99 63.6
Manes.06G169900 Manihot esculenta HOM05D007055 ORTHO05D008943 1.5e-25 120.2 140 54.3
THA.LOC104808116 Tarenaya hassleriana HOM05D007055 ORTHO05D008943 1.5e-25 120.2 108 58.3
BraA07t31929Z Brassica rapa HOM05D007055 ORTHO05D008943 1.9e-25 119.8 98 62.2
CAN.G943.31 Capsicum annuum HOM05D007055 ORTHO05D008943 1.9e-25 119.8 128 54.7
MSTRG.22977 Avicennia marina HOM05D007055 ORTHO05D008943 2.5e-25 119.4 110 56.4
GSVIVG01020441001 Vitis vinifera HOM05D007055 ORTHO05D008943 2.5e-25 119.4 87 74.7
BcaNung04909 Brassica carinata HOM05D007055 ORTHO05D008943 3.3e-25 119.0 104 60.6
Prupe.4G143100 Prunus persica HOM05D007055 ORTHO05D008943 7.3e-25 117.9 94 68.1
SalBow5G4782 Salvia bowleyana HOM05D000091 ORTHO05D003024 1.2e-24 117.1 135 53.3
EL10Ac4g08563 Beta vulgaris HOM05D007055 ORTHO05D008943 4.7e-24 115.2 134 54.5
Cc05_g15950 Coffea canephora HOM05D007055 ORTHO05D008943 6.2e-24 114.8 124 52.4
Sp5g34120 Schrenkiella parvula HOM05D007055 ORTHO05D008943 6.2e-24 114.8 117 57.3
Aa31LG4G1920 Aethionema arabicum HOM05D007055 ORTHO05D008943 3.1e-23 112.5 111 57.7
unitig_699.g19681 Utricularia gibba HOM05D007055 ORTHO05D008943 3.1e-23 112.5 113 55.8
AUR62044625 Chenopodium quinoa HOM05D007055 ORTHO05D008943 4.0e-23 112.1 84 65.5
Oeu002805.1 Olea europaea HOM05D007055 ORTHO05D008943 1.5e-22 110.2 142 47.9
SGA_v2.0_scaffold2G00966 Striga asiatica HOM05D007055 ORTHO05D008943 2.0e-22 109.8 121 50.4
Eucgr.F03184 Eucalyptus grandis HOM05D007055 ORTHO05D008943 3.4e-22 109.0 94 62.8
Migut.H02189 Erythranthe guttata HOM05D007055 ORTHO05D008943 4.4e-22 108.6 136 48.5
HanXRQChr13g0408571 Helianthus annuus HOM05D007055 ORTHO05D008943 9.8e-22 107.5 168 45.2
HPP92_002254 Vanilla planifolia HOM05D007055 ORTHO05D008943 2.9e-21 105.9 78 71.8
Manes.06G170100 Manihot esculenta HOM05D007055 ORTHO05D008943 4.9e-21 105.1 88 65.9
BcaC08g45387 Brassica carinata HOM05D007055 ORTHO05D008943 3.2e-20 102.4 114 51.8
Nitab4.5_0001749g0090 Nicotiana tabacum HOM05D007055 ORTHO05D008943 4.1e-20 102.1 154 44.8
AUR62043058 Chenopodium quinoa HOM05D007055 ORTHO05D008943 2.0e-19 99.8 168 41.1
Pp3c15_3290 Physcomitrium patens HOM05D007055 ORTHO05D008943 1.3e-18 97.1 110 49.1
CDE12G0729 Ceratophyllum demersum HOM05D007055 ORTHO05D008943 1.7e-18 96.7 130 46.2
Manes.06G171100 Manihot esculenta HOM05D007055 ORTHO05D008943 8.6e-18 94.4 118 52.5
Os08g0129900 Oryza sativa ssp. japonica HOM05D007055 ORTHO05D008943 4.3e-17 92.0 97 49.5
vmacro11656 Vaccinium macrocarpon HOM05D007055 ORTHO05D008943 2.8e-16 89.4 53 84.9
Mapoly0112s0058 Marchantia polymorpha HOM05D007055 ORTHO05D008943 1.4e-15 87.0 92 48.9
SHI01886 Sapria himalayana HOM05D007055 ORTHO05D008943 3.1e-15 85.9 116 47.4
TPR.G9749 Trifolium pratense HOM05D007055 ORTHO05D008943 3.1e-15 85.9 61 77.0
Zm00001eb173230 Zea mays HOM05D007055 ORTHO05D008943 1.2e-14 84.0 139 38.8
SalBow5G1530 Salvia bowleyana HOM05D000091 ORTHO05D003024 2.2e-13 79.7 105 48.6
CBR_g41533 Chara braunii HOM05D000019 ORTHO05D000048 3.7e-13 79.0 106 42.5
Nitab4.5_0007742g0030 Nicotiana tabacum HOM05D007055 ORTHO05D008943 4.1e-12 75.5 92 48.9
SMO367G1177 Selaginella moellendorffii HOM05D007055 ORTHO05D008943 7.1e-12 74.7 101 42.6
AagrBONN_evm.TU.Sc2ySwM_228.2782 Anthoceros agrestis HOM05D007055 ORTHO05D008943 2.1e-11 73.2 94 41.5
Haze_08531 Corylus avellana HOM05D007055 ORTHO05D008943 5.8e-06 55.1 43 60.5


User provided reference genes

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