Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib168G0181 Durio zibethinus HOM05D005548 ORTHO05D007497 7.0e-262 906.7 461 100.0
Thecc.09G109700 Theobroma cacao HOM05D005548 ORTHO05D007497 9.3e-230 800.0 462 88.5
Gohir.A07G006100 Gossypium hirsutum HOM05D005548 ORTHO05D007497 3.1e-209 731.9 465 82.4
Gohir.D07G005900 Gossypium hirsutum HOM05D005548 ORTHO05D007497 2.9e-207 725.3 465 81.9
Gorai.001G005500 Gossypium raimondii HOM05D005548 ORTHO05D007497 2.9e-207 725.3 465 81.7
Cpa.g.sc23.102 Carica papaya HOM05D005548 ORTHO05D007497 5.1e-204 714.5 463 79.0
Eucgr.C01037 Eucalyptus grandis HOM05D005548 ORTHO05D007497 4.5e-200 701.4 467 77.3
Duzib150G0071 Durio zibethinus HOM05D005548 ORTHO05D007497 1.3e-199 699.9 455 81.3
COL.COLO4_34874 Corchorus olitorius HOM05D005548 ORTHO05D007497 1.4e-196 689.9 374 90.6
Cfa021563 Carpinus fangiana HOM05D005548 ORTHO05D007497 6.7e-196 687.6 465 76.6
Haze_25730 Corylus avellana HOM05D005548 ORTHO05D007497 5.7e-195 684.5 465 76.8
GSVIVG01015386001 Vitis vinifera HOM05D005548 ORTHO05D007497 1.7e-194 682.9 446 77.8
TAR383G0243 Trochodendron aralioides HOM05D005548 ORTHO05D007497 2.2e-194 682.6 465 74.6
Haze_25723 Corylus avellana HOM05D005548 ORTHO05D007497 8.2e-194 680.6 465 76.6
CiPaw.04G163600 Carya illinoinensis HOM05D005548 ORTHO05D007497 1.1e-193 680.2 462 76.8
Manes.03G021300 Manihot esculenta HOM05D005548 ORTHO05D007497 1.8e-193 679.5 472 75.6
Dinv36636 Davidia involucrata HOM05D005548 ORTHO05D007497 1.5e-192 676.4 464 76.7
PGR142G0895 Punica granatum HOM05D005548 ORTHO05D007497 2.0e-192 676.0 408 81.1
QL02p085206 Quercus lobata HOM05D005548 ORTHO05D007497 4.2e-190 668.3 467 74.1
arahy.Tifrunner.gnm1.ann1.HQIA7A Arachis hypogaea HOM05D005548 ORTHO05D007497 1.6e-189 666.4 470 74.3
TWI63G0439 Tripterygium wilfordii HOM05D005548 ORTHO05D007497 2.1e-189 666.0 464 75.0
Dinv41607 Davidia involucrata HOM05D005548 ORTHO05D007497 4.7e-189 664.8 473 75.1
Hma1.2p1_0518F.1_g171060 Hydrangea macrophylla HOM05D005548 ORTHO05D007497 6.1e-189 664.5 408 80.6
Lj2g0015861 Lotus japonicus HOM05D005548 ORTHO05D007497 3.9e-188 661.8 414 79.5
Glyma.07G085900 Glycine max HOM05D005548 ORTHO05D007497 5.1e-188 661.4 465 73.1
Nn2g11732 Nelumbo nucifera HOM05D005548 ORTHO05D007497 1.5e-187 659.8 466 72.3
Glyma.09G191000 Glycine max HOM05D005548 ORTHO05D007497 5.7e-187 657.9 465 73.5
Potri.018G080900 Populus trichocarpa HOM05D005548 ORTHO05D007497 5.7e-187 657.9 469 74.6
VMungo0464G1126 Vigna mungo HOM05D005548 ORTHO05D007497 2.8e-186 655.6 472 72.9
THA.LOC104811114 Tarenaya hassleriana HOM05D005548 ORTHO05D007497 1.1e-185 653.7 468 74.6
Prupe.7G231800 Prunus persica HOM05D005548 ORTHO05D007497 1.4e-185 653.3 462 72.9
MBI04_g22012_MAGBIO Magnolia biondii HOM05D005548 ORTHO05D007497 1.0e-183 647.1 470 70.9
MD02G1046200 Malus domestica HOM05D005548 ORTHO05D007497 2.2e-183 646.0 464 72.0
Phvul.004G163700 Phaseolus vulgaris HOM05D005548 ORTHO05D007497 2.2e-183 646.0 468 72.0
Sabra18G0068100 Salix brachista HOM05D005548 ORTHO05D007497 2.2e-183 646.0 464 74.6
ClCG00G004520 Citrullus lanatus HOM05D005548 ORTHO05D007497 5.0e-183 644.8 469 70.8
EL10Ac8g18489 Beta vulgaris HOM05D005548 ORTHO05D007497 1.1e-182 643.7 458 73.1
CSS0001162 Camellia sinensis var. sinensis HOM05D005548 ORTHO05D007497 1.1e-182 643.7 464 73.9
Actinidia09420 Actinidia chinensis HOM05D005548 ORTHO05D007497 5.5e-182 641.3 468 71.4
Atru.chr7.1357 Acer truncatum HOM05D005548 ORTHO05D007497 9.4e-182 640.6 381 83.7
DCAR_010452 Daucus carota HOM05D005548 ORTHO05D007497 2.7e-181 639.0 460 72.2
CSS0009071 Camellia sinensis var. sinensis HOM05D005548 ORTHO05D007497 8.0e-181 637.5 464 73.7
Nitab4.5_0005947g0010 Nicotiana tabacum HOM05D005548 ORTHO05D007497 8.0e-181 637.5 462 73.2
Sed0013441 Sechium edule HOM05D005548 ORTHO05D007497 8.0e-181 637.5 452 71.9
Cc06_g09710 Coffea canephora HOM05D005548 ORTHO05D007497 3.0e-180 635.6 482 71.0
Sc18g0001240 Simmondsia chinensis HOM05D005548 ORTHO05D007497 5.2e-180 634.8 466 70.2
MELO3C025346.2 Cucumis melo HOM05D005548 ORTHO05D007497 2.0e-179 632.9 485 68.5
FAN19G0123 Fragaria x ananassa HOM05D005548 ORTHO05D007497 9.7e-179 630.6 461 71.1
CAN.G1529.9 Capsicum annuum HOM05D005548 ORTHO05D007497 1.3e-178 630.2 462 71.9
FvH4_1g04721 Fragaria vesca HOM05D005548 ORTHO05D007497 2.8e-178 629.0 461 71.1
CsaV3_1G024240 Cucumis sativus L. HOM05D005548 ORTHO05D007497 3.7e-178 628.6 494 67.0
PGSC0003DMG400000312 Solanum tuberosum HOM05D005548 ORTHO05D007497 3.7e-178 628.6 461 72.5
RcHm_v2.0_Chr2g0090331 Rosa chinensis HOM05D005548 ORTHO05D007497 8.2e-178 627.5 453 72.4
Hund26198 Selenicereus undatus HOM05D005548 ORTHO05D007497 1.2e-176 623.6 463 71.3
FAN26G0240 Fragaria x ananassa HOM05D005548 ORTHO05D007497 1.6e-176 623.2 464 70.7
Lj7C651T8 Lonicera japonica HOM05D005548 ORTHO05D007497 1.6e-176 623.2 467 70.7
Lalb_Chr22g0352791 Lupinus albus HOM05D005548 ORTHO05D007497 1.6e-176 623.2 467 71.3
Solyc12g007090.2 Solanum lycopersicum HOM05D005548 ORTHO05D007497 2.7e-176 622.5 461 72.2
Sopen12g003070 Solanum pennellii HOM05D005548 ORTHO05D007497 2.7e-176 622.5 461 72.0
Lalb_Chr14g0371531 Lupinus albus HOM05D005548 ORTHO05D007497 7.7e-176 620.9 464 71.3
Ca_03976_v3 Cicer arietinum L. HOM05D005548 ORTHO05D007497 4.2e-174 615.1 465 69.9
PSO832G1226 Papaver somniferum HOM05D005548 ORTHO05D007497 7.2e-174 614.4 420 72.4
FAN23G0305 Fragaria x ananassa HOM05D005548 ORTHO05D007497 9.4e-174 614.0 464 70.0
Actinidia20374 Actinidia chinensis HOM05D005548 ORTHO05D007497 2.1e-173 612.8 381 78.7
AUR62010987 Chenopodium quinoa HOM05D005548 ORTHO05D007497 8.0e-173 610.9 374 79.7
Lsat_1_v5_gn_8_95001 Lactuca sativa HOM05D005548 ORTHO05D007497 8.0e-173 610.9 448 69.9
PSO782G1908 Papaver somniferum HOM05D005548 ORTHO05D007497 5.2e-172 608.2 404 73.8
TPR.G18453 Trifolium pratense HOM05D005548 ORTHO05D007497 6.8e-172 607.8 462 70.6
Peaxi162Scf00546g00024 Petunia axillaris HOM05D005548 ORTHO05D007497 8.8e-172 607.4 462 70.8
MSTRG.26421 Avicennia marina HOM05D005548 ORTHO05D007497 1.2e-171 607.1 418 72.7
MD15G1184300 Malus domestica HOM05D005548 ORTHO05D007497 1.5e-171 606.7 462 68.4
Aqoxy7G01651 Aquilegia oxysepala HOM05D005548 ORTHO05D007497 4.4e-171 605.1 456 68.0
HanXRQChr06g0179971 Helianthus annuus HOM05D005548 ORTHO05D007497 2.2e-170 602.8 449 69.7
Medtr6g088460 Medicago truncatula HOM05D005548 ORTHO05D007497 2.2e-170 602.8 455 69.0
Migut.K00455 Erythranthe guttata HOM05D005548 ORTHO05D007497 4.1e-169 598.6 465 68.8
ECA233G4048 Erigeron canadensis HOM05D005548 ORTHO05D007497 5.4e-169 598.2 379 77.6
Nitab4.5_0002904g0080 Nicotiana tabacum HOM05D005548 ORTHO05D007497 1.2e-168 597.0 463 70.2
SalBow1G6148 Salvia bowleyana HOM05D005548 ORTHO05D007497 1.7e-167 593.2 468 67.7
CARHR193360 Cardamine hirsuta HOM05D005548 ORTHO05D007497 1.9e-166 589.7 468 66.7
ATR0315G003 Amborella trichopoda HOM05D005548 ORTHO05D007497 3.6e-165 585.5 394 72.8
Psat1g042920 Pisum sativum HOM05D005548 ORTHO05D007497 1.0e-164 583.9 465 66.9
unitig_899.g15439 Utricularia gibba HOM05D005548 ORTHO05D007497 2.3e-164 582.8 393 73.0
AT5G19540 Arabidopsis thaliana HOM05D005548 ORTHO05D007497 2.0e-163 579.7 464 65.5
Carub.0006s1789 Capsella rubella HOM05D005548 ORTHO05D007497 2.0e-163 579.7 457 66.5
AL6G31050 Arabidopsis lyrata HOM05D005548 ORTHO05D007497 4.9e-162 575.1 448 65.4
CDE02G3701 Ceratophyllum demersum HOM05D005548 ORTHO05D007497 6.3e-162 574.7 461 64.4
Thhalv10013469m.g Eutrema salsugineum HOM05D005548 ORTHO05D007497 8.3e-162 574.3 465 65.2
Sp6g24840 Schrenkiella parvula HOM05D005548 ORTHO05D007497 1.1e-161 573.9 462 65.2
BcaB05g23389 Brassica carinata HOM05D005548 ORTHO05D007497 1.6e-160 570.1 471 63.3
Aa31LG4G18070 Aethionema arabicum HOM05D005548 ORTHO05D007497 1.3e-159 567.0 407 70.0
SGA_v2.0_scaffold307G48040 Striga asiatica HOM05D005548 ORTHO05D007497 1.7e-159 566.6 450 64.7
A02p05630 Brassica napus HOM05D005548 ORTHO05D007497 8.6e-159 564.3 452 65.3
BraA02t05515Z Brassica rapa HOM05D005548 ORTHO05D007497 8.6e-159 564.3 452 65.3
BolC2t06964H Brassica oleracea HOM05D005548 ORTHO05D007497 1.2e-157 560.5 472 64.2
BcaC03g13685 Brassica carinata HOM05D005548 ORTHO05D007497 2.1e-157 559.7 472 64.0
BNapus_Darmor_BZH_scaffold_38p02320 Brassica napus HOM05D005548 ORTHO05D007497 2.1e-157 559.7 472 64.0
Hma1.2p1_0518F.1_g171070 Hydrangea macrophylla HOM05D005548 ORTHO05D007497 1.1e-150 537.3 315 83.5
vmacro20704 Vaccinium macrocarpon HOM05D005548 ORTHO05D007497 1.6e-149 533.5 463 59.8
Zm00001eb042080 Zea mays HOM05D005548 ORTHO05D007497 6.4e-146 521.5 439 60.4
Os08g0387500 Oryza sativa ssp. japonica HOM05D005548 ORTHO05D007497 1.2e-144 517.3 396 65.4
Rhsim01G0095300 Rhododendron simsii HOM05D005548 ORTHO05D007497 4.6e-144 515.4 464 57.8
FAN28G1005 Fragaria x ananassa HOM05D005548 ORTHO05D007497 1.6e-141 506.9 392 69.6
SalBow1G2309 Salvia bowleyana HOM05D005548 ORTHO05D007497 2.8e-141 506.1 345 74.2
HPP92_019989 Vanilla planifolia HOM05D005548 ORTHO05D004628 1.1e-113 414.5 418 55.3
AUR62021496 Chenopodium quinoa HOM05D005548 ORTHO05D007497 3.1e-108 396.4 274 74.5
Mapoly0115s0052 Marchantia polymorpha HOM05D005548 ORTHO05D007497 4.6e-104 382.5 397 50.4
AagrBONN_evm.TU.Sc2ySwM_344.3922 Anthoceros agrestis HOM05D005548 ORTHO05D007497 2.3e-103 380.2 451 46.1
Pp3c17_15530 Physcomitrium patens HOM05D005548 ORTHO05D007497 3.9e-103 379.4 395 49.4
Pp3c17_15540 Physcomitrium patens HOM05D005548 ORTHO05D007497 8.1e-101 371.7 380 50.0
SEGI_13755 Sequoiadendron giganteum HOM05D005548 ORTHO05D007497 1.6e-96 357.5 367 52.0
SMO367G0640 Selaginella moellendorffii HOM05D005548 ORTHO05D007497 2.1e-93 347.1 392 49.0
SEGI_11261 Sequoiadendron giganteum HOM05D005548 ORTHO05D007497 1.1e-81 308.1 317 51.7
Rhsim01G0096400 Rhododendron simsii HOM05D005548 ORTHO05D007497 1.2e-80 304.7 340 46.2
CBR_g3024 Chara braunii HOM05D005548 ORTHO05D007497 2.4e-76 290.4 382 44.8
AUR62021498 Chenopodium quinoa HOM05D005548 ORTHO05D007497 1.7e-61 241.1 136 81.6
Ciclev10010350m.g Citrus clementina HOM05D005548 ORTHO05D007497 1.9e-49 201.1 323 44.6
Nn8g39172 Nelumbo nucifera HOM05D005548 ORTHO05D007497 3.3e-41 173.7 104 81.7
Oeu048670.1 Olea europaea HOM05D005548 ORTHO05D007497 1.0e-39 168.7 99 74.7
CSS0016063 Camellia sinensis var. sinensis HOM05D003621 ORTHO05D004259 6.4e-29 132.9 83 80.7
SEGI_35049 Sequoiadendron giganteum HOM05D005548 ORTHO05D007497 1.4e-28 131.7 266 35.0
CSS0042262 Camellia sinensis var. sinensis HOM05D003621 ORTHO05D004259 3.2e-28 130.6 83 79.5
SEGI_23308 Sequoiadendron giganteum HOM05D005548 ORTHO05D007497 3.5e-27 127.1 318 32.1
CSS0021555 Camellia sinensis var. sinensis HOM05D005548 ORTHO05D007497 8.6e-26 122.5 92 68.5
Ah.12g056490 Amaranthus hybridus HOM05D005548 ORTHO05D007497 1.5e-25 121.7 83 77.1
Dinv06981 Davidia involucrata HOM05D005548 ORTHO05D045157 1.5e-25 121.7 89 69.7
arahy.Tifrunner.gnm1.ann1.VN1956 Arachis hypogaea HOM05D005548 ORTHO05D007497 2.5e-25 120.9 140 55.0
CSS0011769 Camellia sinensis var. sinensis HOM05D005548 ORTHO05D007497 3.7e-21 107.1 141 53.9
MCO02G293 Micromonas commoda HOM05D005548 ORTHO05D007497 2.4e-20 104.4 341 29.3
CSS0008802 Camellia sinensis var. sinensis HOM05D005548 ORTHO05D007497 1.4e-15 88.6 132 50.0
CSS0008633 Camellia sinensis var. sinensis HOM05D005548 ORTHO05D007497 5.2e-15 86.7 92 54.3
SalBow1G1492 Salvia bowleyana HOM05D005548 ORTHO05D007497 1.3e-13 82.0 125 44.0


User provided reference genes

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