Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib160G0139 Durio zibethinus HOM05D008010 ORTHO05D010085 1.8e-132 476.1 268 100.0
Thecc.06G167300 Theobroma cacao HOM05D008010 ORTHO05D010085 1.2e-75 287.3 248 70.2
Gorai.010G160200 Gossypium raimondii HOM05D008010 ORTHO05D010085 1.0e-55 221.1 253 56.1
Gohir.D06G137900 Gossypium hirsutum HOM05D008010 ORTHO05D010085 1.7e-53 213.8 253 54.9
Gohir.A06G132400 Gossypium hirsutum HOM05D008010 ORTHO05D010085 4.8e-53 212.2 253 54.9
Dinv12764 Davidia involucrata HOM05D008010 ORTHO05D010085 2.8e-37 159.8 263 45.6
GSVIVG01021245001 Vitis vinifera HOM05D008010 ORTHO05D010085 1.6e-32 144.1 255 45.5
Cpa.g.sc7.102 Carica papaya HOM05D008010 ORTHO05D010085 9.7e-30 134.8 254 47.2
Manes.16G041900 Manihot esculenta HOM05D008010 ORTHO05D010085 2.4e-28 130.2 253 43.5
Sabra11G0057100 Salix brachista HOM05D008010 ORTHO05D010085 9.1e-28 128.3 235 42.6
Sabra11G0053600 Salix brachista HOM05D004193 ORTHO05D004862 1.2e-27 127.9 223 43.9
Atru.chr10.1588_Atru.chr10.1589 Acer truncatum HOM05D008010 ORTHO05D010085 2.7e-27 126.7 238 47.1
Prupe.4G065300 Prunus persica HOM05D008010 ORTHO05D010085 2.2e-26 123.6 247 39.7
FAN25G1163 Fragaria x ananassa HOM05D008010 ORTHO05D010085 5.0e-26 122.5 260 38.1
Nn3g21124 Nelumbo nucifera HOM05D008010 ORTHO05D010085 5.5e-25 119.0 243 44.0
FvH4_3g07440 Fragaria vesca HOM05D008010 ORTHO05D010085 1.6e-24 117.5 260 37.3
RcHm_v2.0_Chr5g0011411 Rosa chinensis HOM05D008010 ORTHO05D010085 6.1e-24 115.5 258 39.1
PGR031G1466 Punica granatum HOM05D008010 ORTHO05D010085 8.0e-24 115.2 213 39.9
FAN21G0683 Fragaria x ananassa HOM05D008010 ORTHO05D010085 1.4e-23 114.4 226 39.4
Sed0009144 Sechium edule HOM05D008010 ORTHO05D010085 1.5e-22 110.9 226 39.8
Potri.011G069300 Populus trichocarpa HOM05D008010 ORTHO05D010085 3.4e-22 109.8 163 46.0
Haze_06192 Corylus avellana HOM05D008010 ORTHO05D010085 7.5e-22 108.6 158 46.8
Cfa000638 Carpinus fangiana HOM05D008010 ORTHO05D010085 1.7e-21 107.5 158 46.8
Eucgr.D00477 Eucalyptus grandis HOM05D008010 ORTHO05D010085 1.1e-20 104.8 226 35.8
Potri.004G059300 Populus trichocarpa HOM05D008010 ORTHO05D010085 9.1e-20 101.7 164 42.1
Lj6g0013702 Lotus japonicus HOM05D008010 ORTHO05D010085 1.2e-19 101.3 248 36.7
ClCG03G007530 Citrullus lanatus HOM05D008010 ORTHO05D010085 1.6e-19 100.9 235 40.0
Nitab4.5_0008462g0010 Nicotiana tabacum HOM05D008010 ORTHO05D010085 2.0e-19 100.5 248 35.1
MELO3C002669.2 Cucumis melo HOM05D008010 ORTHO05D010085 2.7e-19 100.1 216 40.3
CiPaw.09G071800 Carya illinoinensis HOM05D008010 ORTHO05D010085 1.0e-18 98.2 177 41.8
Cc02_g15430 Coffea canephora HOM05D008010 ORTHO05D010085 2.3e-18 97.1 252 33.7
COL.COLO4_31257 Corchorus olitorius HOM05D008010 ORTHO05D010085 2.3e-18 97.1 391 30.7
CsaV3_1G033180 Cucumis sativus L. HOM05D008010 ORTHO05D010085 1.1e-17 94.7 236 38.1
Nitab4.5_0002185g0010 Nicotiana tabacum HOM05D008010 ORTHO05D010085 2.5e-17 93.6 259 34.4
MD05G1297000 Malus domestica HOM05D008010 ORTHO05D010085 3.3e-17 93.2 269 30.9
Peaxi162Scf00371g00017 Petunia axillaris HOM05D008010 ORTHO05D010085 3.3e-17 93.2 205 33.2
FAN16G3557 Fragaria x ananassa HOM05D008010 ORTHO05D010085 4.2e-17 92.8 271 35.1
Lsat_1_v5_gn_1_109280 Lactuca sativa HOM05D008010 ORTHO05D010085 4.2e-17 92.8 209 40.7
ATR0127G032 Amborella trichopoda HOM05D008010 ORTHO05D010085 7.2e-17 92.0 225 36.4
THA.LOC104806163 Tarenaya hassleriana HOM05D008010 ORTHO05D010085 1.2e-16 91.3 163 40.5
Lalb_Chr18g0054681 Lupinus albus HOM05D008010 ORTHO05D010085 2.1e-16 90.5 173 38.7
AL7G35510 Arabidopsis lyrata HOM05D008010 ORTHO05D010085 2.8e-16 90.1 181 39.8
Aqoxy1G02001 Aquilegia oxysepala HOM05D004193 ORTHO05D004862 4.7e-16 89.4 219 36.1
DCAR_027988 Daucus carota HOM05D008010 ORTHO05D010085 4.7e-16 89.4 194 38.1
CAN.G411.60 Capsicum annuum HOM05D008010 ORTHO05D010085 8.0e-16 88.6 260 33.1
CDE03G0033 Ceratophyllum demersum HOM05D008010 ORTHO05D010085 8.9e-15 85.1 221 33.0
Sopen02g021240 Solanum pennellii HOM05D008010 ORTHO05D010085 8.9e-15 85.1 248 35.5
Solyc02g072260.4 Solanum lycopersicum HOM05D008010 ORTHO05D010085 5.7e-14 82.4 194 36.1
Migut.M01016 Erythranthe guttata HOM05D008010 ORTHO05D010085 1.3e-13 81.3 247 32.4
QL05p048352 Quercus lobata HOM05D008010 ORTHO05D010085 2.2e-13 80.5 285 36.1
AUR62039459 Chenopodium quinoa HOM05D008010 ORTHO05D010085 2.8e-13 80.1 211 32.7
Ciclev10016384m.g Citrus clementina HOM05D008010 ORTHO05D010085 2.8e-13 80.1 237 35.9
PGSC0003DMG401028427 Solanum tuberosum HOM05D004193 ORTHO05D004862 2.8e-13 80.1 207 35.7
AUR62027705 Chenopodium quinoa HOM05D008010 ORTHO05D010085 4.9e-13 79.3 202 34.2
TAR624G0391 Trochodendron aralioides HOM05D008010 ORTHO05D010085 4.9e-13 79.3 260 39.2
EL10Ac8g20573 Beta vulgaris HOM05D008010 ORTHO05D010085 5.4e-12 75.9 213 33.3
AT4G18740 Arabidopsis thaliana HOM05D008010 ORTHO05D010085 1.6e-11 74.3 166 38.0
ECA248G1583 Erigeron canadensis HOM05D000006 ORTHO05D000091 3.5e-11 73.2 213 38.0
Actinidia16781 Actinidia chinensis HOM05D008010 ORTHO05D010085 1.7e-10 70.9 151 36.4
BcaNung05918 Brassica carinata HOM05D008010 ORTHO05D010085 1.7e-10 70.9 201 34.3
MBI07_g09547_MAGBIO Magnolia biondii HOM05D008010 ORTHO05D010085 1.7e-10 70.9 144 41.0
ECA248G2359 Erigeron canadensis HOM05D008010 ORTHO05D010085 2.3e-10 70.5 147 43.5
BolC1t01249H Brassica oleracea HOM05D008010 ORTHO05D010085 3.9e-10 69.7 164 37.2
arahy.Tifrunner.gnm1.ann1.42QDDD Arachis hypogaea HOM05D008010 ORTHO05D010085 5.0e-10 69.3 172 36.6
CARHR225590 Cardamine hirsuta HOM05D008010 ORTHO05D010085 8.6e-10 68.6 172 36.0
C01p12720 Brassica napus HOM05D008010 ORTHO05D010085 1.9e-09 67.4 207 34.8
CDE04G0279 Ceratophyllum demersum HOM05D008010 ORTHO05D010085 1.9e-09 67.4 211 31.8
arahy.Tifrunner.gnm1.ann1.NGY302 Arachis hypogaea HOM05D008010 ORTHO05D010085 2.5e-09 67.0 253 29.6
BcaC09g51471 Brassica carinata HOM05D008010 ORTHO05D010085 3.3e-09 66.6 207 34.3
Ah.14g087050 Amaranthus hybridus HOM05D004193 ORTHO05D004862 4.3e-09 66.2 161 34.2
BraA01t01022Z Brassica rapa HOM05D008010 ORTHO05D010085 1.2e-08 64.7 199 33.2
A01p10760 Brassica napus HOM05D008010 ORTHO05D010085 2.8e-08 63.5 199 33.2


User provided reference genes

Program Settings