Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib160G0112 Durio zibethinus HOM05D005610 ORTHO05D006181 3.9e-60 234.6 116 100.0
Duzib235G0930 Durio zibethinus HOM05D005610 ORTHO05D006181 4.0e-57 224.6 116 94.0
Gohir.A06G152700 Gossypium hirsutum HOM05D005610 ORTHO05D006181 5.3e-57 224.2 116 93.1
Gorai.010G185800 Gossypium raimondii HOM05D005610 ORTHO05D006181 7.6e-56 220.3 116 91.4
Thecc.06G231600 Theobroma cacao HOM05D005610 ORTHO05D006181 2.2e-55 218.8 112 93.8
COL.COLO4_31865 Corchorus olitorius HOM05D005610 ORTHO05D006181 4.9e-55 217.6 115 90.4
Thecc.10G134700 Theobroma cacao HOM05D005610 ORTHO05D006181 5.5e-54 214.2 112 90.2
Thecc.10G135500 Theobroma cacao HOM05D005610 ORTHO05D006181 1.6e-53 212.6 112 89.3
Prupe.8G114900 Prunus persica HOM05D005610 ORTHO05D006181 2.5e-51 205.3 116 83.6
Prupe.8G115200 Prunus persica HOM05D005610 ORTHO05D006181 3.3e-51 204.9 116 83.6
Cpa.g.sc152.66 Carica papaya HOM05D005610 ORTHO05D006181 4.3e-51 204.5 116 82.8
MD10G1088300 Malus domestica HOM05D005610 ORTHO05D006181 3.7e-50 201.4 116 81.9
Dinv13959 Davidia involucrata HOM05D005610 ORTHO05D006181 6.3e-50 200.7 111 84.7
QL10p003579 Quercus lobata HOM05D005610 ORTHO05D006181 6.3e-50 200.7 115 81.7
Atru.chr1.2482 Acer truncatum HOM05D005610 ORTHO05D006181 1.1e-49 199.9 114 83.3
ClCG01G011300 Citrullus lanatus HOM05D005610 ORTHO05D006181 1.1e-49 199.9 112 82.1
Ciclev10017234m.g Citrus clementina HOM05D005610 ORTHO05D006181 1.1e-49 199.9 114 83.3
Haze_06904 Corylus avellana HOM05D005610 ORTHO05D006181 1.1e-49 199.9 116 78.4
ClCG07G002910 Citrullus lanatus HOM05D005610 ORTHO05D006181 2.4e-49 198.7 111 82.0
CiPaw.10G076800 Carya illinoinensis HOM05D005610 ORTHO05D006181 6.9e-49 197.2 116 81.9
MELO3C008876.2 Cucumis melo HOM05D005610 ORTHO05D006181 6.9e-49 197.2 112 80.4
CANSAT01G2220 Cannabis sativa HOM05D005610 ORTHO05D006181 9.0e-49 196.8 114 79.8
CAN.G1263.12 Capsicum annuum HOM05D005610 ORTHO05D006181 9.0e-49 196.8 113 81.4
CsaV3_4G031690 Cucumis sativus L. HOM05D005610 ORTHO05D006181 1.2e-48 196.4 115 78.3
FAN15G0825 Fragaria x ananassa HOM05D005610 ORTHO05D006181 1.5e-48 196.1 116 79.3
PGR142G4331 Punica granatum HOM05D005610 ORTHO05D006181 1.5e-48 196.1 111 82.9
RcHm_v2.0_Chr6g0259461 Rosa chinensis HOM05D005610 ORTHO05D006181 2.6e-48 195.3 116 79.3
TWI38G1154 Tripterygium wilfordii HOM05D005610 ORTHO05D006181 3.4e-48 194.9 111 82.0
Actinidia26870 Actinidia chinensis HOM05D005610 ORTHO05D006181 5.9e-48 194.1 114 78.9
Sopen04g006810 Solanum pennellii HOM05D005610 ORTHO05D006181 7.7e-48 193.7 113 80.5
GSVIVG01008189001 Vitis vinifera HOM05D005610 ORTHO05D006181 1.0e-47 193.4 116 78.4
FvH4_2g07070 Fragaria vesca HOM05D005610 ORTHO05D006181 1.3e-47 193.0 116 77.6
Solyc04g014700.4 Solanum lycopersicum HOM05D005610 ORTHO05D006181 1.3e-47 193.0 113 80.5
Peaxi162Scf00442g00523 Petunia axillaris HOM05D005610 ORTHO05D006181 1.7e-47 192.6 113 80.5
Eucgr.B02596 Eucalyptus grandis HOM05D005610 ORTHO05D006181 2.2e-47 192.2 111 82.0
Nitab4.5_0001701g0220 Nicotiana tabacum HOM05D005610 ORTHO05D006181 2.2e-47 192.2 113 79.6
PGSC0003DMG400023560 Solanum tuberosum HOM05D005610 ORTHO05D006181 2.2e-47 192.2 113 79.6
Nitab4.5_0008006g0060 Nicotiana tabacum HOM05D005610 ORTHO05D006181 3.8e-47 191.4 113 79.6
Sed0027170 Sechium edule HOM05D005610 ORTHO05D006181 5.0e-47 191.0 110 79.1
PSO210G2880 Papaver somniferum HOM05D005610 ORTHO05D006181 6.5e-47 190.7 116 75.9
EL10Ac4g08756 Beta vulgaris HOM05D005610 ORTHO05D006181 8.5e-47 190.3 113 80.5
Nitab4.5_0001867g0090 Nicotiana tabacum HOM05D005610 ORTHO05D006181 8.5e-47 190.3 113 79.6
Nitab4.5_0018980g0020 Nicotiana tabacum HOM05D005610 ORTHO05D006181 8.5e-47 190.3 113 78.8
Glyma.19G169600 Glycine max HOM05D005610 ORTHO05D006181 5.5e-46 187.6 116 75.9
SalBow8G2682 Salvia bowleyana HOM05D005610 ORTHO05D006181 5.5e-46 187.6 113 76.1
TAR624G0514 Trochodendron aralioides HOM05D005610 ORTHO05D006181 7.2e-46 187.2 116 75.0
Aqoxy4G02780 Aquilegia oxysepala HOM05D005610 ORTHO05D006181 9.4e-46 186.8 112 76.8
Cc00_g15270 Coffea canephora HOM05D005610 ORTHO05D006181 1.2e-45 186.4 116 75.0
Ca_13393_v3 Cicer arietinum L. HOM05D005610 ORTHO05D006181 1.6e-45 186.0 113 77.9
PSO302G0046 Papaver somniferum HOM05D005610 ORTHO05D006181 2.7e-45 185.3 116 73.3
Phvul.004G117800 Phaseolus vulgaris HOM05D005610 ORTHO05D006181 2.7e-45 185.3 116 74.1
arahy.Tifrunner.gnm1.ann1.PD4MQY Arachis hypogaea HOM05D005610 ORTHO05D006181 3.6e-45 184.9 116 75.0
Lj4g0017663 Lotus japonicus HOM05D005610 ORTHO05D006181 4.6e-45 184.5 116 75.0
Lj5g0020791 Lotus japonicus HOM05D005610 ORTHO05D006181 4.6e-45 184.5 116 75.0
Glyma.03G168300 Glycine max HOM05D005610 ORTHO05D006181 6.1e-45 184.1 116 73.3
Hund25163 Selenicereus undatus HOM05D005610 ORTHO05D006181 6.1e-45 184.1 115 74.8
AUR62014294 Chenopodium quinoa HOM05D005610 ORTHO05D006181 7.9e-45 183.7 115 74.8
AUR62034142 Chenopodium quinoa HOM05D005610 ORTHO05D006181 7.9e-45 183.7 113 76.1
arahy.Tifrunner.gnm1.ann1.IYUI89 Arachis hypogaea HOM05D003989 ORTHO05D004626 1.0e-44 183.3 116 74.1
CSS0047184 Camellia sinensis var. sinensis HOM05D005610 ORTHO05D006181 1.0e-44 183.3 111 76.6
CDE04G2721 Ceratophyllum demersum HOM05D005610 ORTHO05D006181 1.0e-44 183.3 116 73.3
ECA238G1057 Erigeron canadensis HOM05D005610 ORTHO05D006181 1.0e-44 183.3 111 74.8
vmacro03652 Vaccinium macrocarpon HOM05D005610 ORTHO05D006181 1.0e-44 183.3 113 73.5
Medtr1g023330 Medicago truncatula HOM05D005610 ORTHO05D006181 1.4e-44 183.0 113 76.1
Aa31LG5G10530 Aethionema arabicum HOM05D005610 ORTHO05D006181 3.9e-44 181.4 114 71.1
Medtr8g106470 Medicago truncatula HOM05D005610 ORTHO05D006181 3.9e-44 181.4 113 77.0
Manes.16G001300 Manihot esculenta HOM05D005610 ORTHO05D006181 6.7e-44 180.6 114 77.2
SGA_v2.0_scaffold7G03768 Striga asiatica HOM05D005610 ORTHO05D006181 6.7e-44 180.6 111 73.0
Cc09_g00980 Coffea canephora HOM05D005610 ORTHO05D006181 1.5e-43 179.5 114 73.7
HanXRQChr05g0129341 Helianthus annuus HOM05D005610 ORTHO05D006181 1.5e-43 179.5 115 73.9
Carub.0003s0067 Capsella rubella HOM05D005610 ORTHO05D006181 2.5e-43 178.7 114 71.1
CARHR075530 Cardamine hirsuta HOM05D005610 ORTHO05D006181 2.5e-43 178.7 114 71.9
Migut.H01600 Erythranthe guttata HOM05D005610 ORTHO05D006181 3.3e-43 178.3 111 73.0
Thhalv10022365m.g Eutrema salsugineum HOM05D005610 ORTHO05D006181 3.3e-43 178.3 114 69.3
SGA_v2.0_scaffold4G01884 Striga asiatica HOM05D005610 ORTHO05D006181 3.3e-43 178.3 111 73.0
THA.LOC104822382 Tarenaya hassleriana HOM05D005610 ORTHO05D006181 3.3e-43 178.3 114 71.9
AT3G01435 Arabidopsis thaliana HOM05D005610 ORTHO05D006181 7.4e-43 177.2 114 70.2
BcaC09g47662 Brassica carinata HOM05D005610 ORTHO05D006181 7.4e-43 177.2 114 69.3
AL3G10740 Arabidopsis lyrata HOM05D005610 ORTHO05D006181 9.7e-43 176.8 114 70.2
Lalb_Chr04g0257231 Lupinus albus HOM05D005610 ORTHO05D006181 9.7e-43 176.8 113 74.3
BNapus_Darmor_BZH_scaffold_133p00040 Brassica napus HOM05D005610 ORTHO05D006181 2.2e-42 175.6 114 68.4
BraA01t04664Z Brassica rapa HOM05D005610 ORTHO05D006181 2.2e-42 175.6 114 68.4
MSTRG.13119 Avicennia marina HOM05D005610 ORTHO05D006181 2.8e-42 175.3 111 73.0
Oeu054255.1 Olea europaea HOM05D005610 ORTHO05D006181 2.8e-42 175.3 112 73.2
Sp3g00630 Schrenkiella parvula HOM05D005610 ORTHO05D006181 3.7e-42 174.9 114 67.5
Nn8g38603 Nelumbo nucifera HOM05D005610 ORTHO05D006181 8.2e-42 173.7 116 71.6
Sabra04G0000600 Salix brachista HOM05D005610 ORTHO05D006181 1.1e-41 173.3 108 75.0
Lj6g0026774 Lotus japonicus HOM05D005610 ORTHO05D006181 2.4e-41 172.2 116 69.0
Potri.004G001600 Populus trichocarpa HOM05D005610 ORTHO05D006181 2.4e-41 172.2 108 75.0
A05p44570 Brassica napus HOM05D005610 ORTHO05D006181 5.3e-41 171.0 114 68.4
BraA05t23199Z Brassica rapa HOM05D005610 ORTHO05D006181 5.3e-41 171.0 114 68.4
VMungo0464G1641 Vigna mungo HOM05D005610 ORTHO05D006181 6.9e-41 170.6 140 61.4
Gohir.D06G159100 Gossypium hirsutum HOM05D005610 ORTHO05D006181 2.0e-40 169.1 86 91.9
Oeu052223.1 Olea europaea HOM05D005610 ORTHO05D006181 7.7e-40 167.2 111 70.3
BolC5t35148H Brassica oleracea HOM05D005610 ORTHO05D006181 1.3e-39 166.4 114 66.7
Thhalv10022907m.g Eutrema salsugineum HOM05D005610 ORTHO05D006181 2.2e-39 165.6 129 60.5
unitig_748.g7924 Utricularia gibba HOM05D000772 ORTHO05D006181 2.9e-39 165.2 110 69.1
BolC1t05956H Brassica oleracea HOM05D005610 ORTHO05D006181 1.1e-38 163.3 135 57.8
C09p75160 Brassica napus HOM05D005610 ORTHO05D006181 1.4e-38 162.9 114 65.8
Ah.06g187910 Amaranthus hybridus HOM05D005610 ORTHO05D006181 3.2e-38 161.8 99 74.7
ATR1153G018 Amborella trichopoda HOM05D005610 ORTHO05D006181 9.4e-38 160.2 105 69.5
Lsat_1_v5_gn_7_13401 Lactuca sativa HOM05D005610 ORTHO05D006181 3.0e-36 155.2 97 70.1
ATR0723G088 Amborella trichopoda HOM05D005610 ORTHO05D006181 8.8e-36 153.7 105 67.6
Zm00001eb234830 Zea mays HOM05D005610 ORTHO05D006181 2.6e-35 152.1 105 64.8
HPP92_003728 Vanilla planifolia HOM05D005610 ORTHO05D006181 7.4e-35 150.6 107 64.5
Os02g0189100 Oryza sativa ssp. japonica HOM05D005610 ORTHO05D006181 8.2e-34 147.1 110 60.9
MBI19_g29445_MAGBIO Magnolia biondii HOM05D005610 ORTHO05D006181 9.1e-33 143.7 134 54.5
FAN24G2055 Fragaria x ananassa HOM05D005610 ORTHO05D006181 1.5e-32 142.9 86 73.3
SEGI_23772 Sequoiadendron giganteum HOM05D005610 ORTHO05D006181 1.7e-31 139.4 106 66.0
CSS0025052 Camellia sinensis var. sinensis HOM05D005610 ORTHO05D006181 1.1e-30 136.7 81 74.1
Zm00001eb206370 Zea mays HOM05D005610 ORTHO05D006181 1.5e-30 136.3 97 63.9
Psat6g005240 Pisum sativum HOM05D005610 ORTHO05D006181 2.5e-30 135.6 100 70.0
TAR626G0207 Trochodendron aralioides HOM05D005610 ORTHO05D006181 4.2e-30 134.8 179 44.7
Thecc.10G135300 Theobroma cacao HOM05D005610 ORTHO05D006181 7.2e-30 134.0 70 92.9
Dinv29757 Davidia involucrata HOM05D005610 ORTHO05D006181 2.7e-29 132.1 87 73.6
Pp3c10_18150 Physcomitrium patens HOM05D005610 ORTHO05D006181 8.8e-28 127.1 107 53.3
HanXRQChr15g0470051 Helianthus annuus HOM05D005610 ORTHO05D006181 1.5e-27 126.3 88 67.0
Eucgr.K02585 Eucalyptus grandis HOM05D005610 ORTHO05D006181 6.3e-26 120.9 70 82.9
Mapoly0014s0199 Marchantia polymorpha HOM05D005610 ORTHO05D006181 8.2e-26 120.6 105 54.3
BNapus_Darmor_BZH_scaffold_119p00050 Brassica napus HOM05D005610 ORTHO05D006181 5.3e-25 117.9 71 74.6
BNapus_Darmor_BZH_scaffold_97p00380 Brassica napus HOM05D005610 ORTHO05D006181 5.3e-25 117.9 71 74.6
Actinidia02323 Actinidia chinensis HOM05D005610 ORTHO05D006181 2.0e-24 115.9 67 77.6
SMO200G0153 Selaginella moellendorffii HOM05D005610 ORTHO05D006181 3.5e-24 115.2 109 48.6
FAN27G3428 Fragaria x ananassa HOM05D005610 ORTHO05D006181 6.5e-23 110.9 76 65.8
Zm00001eb004040 Zea mays HOM05D005610 ORTHO05D006181 1.5e-22 109.8 74 63.5
CBR_g27782 Chara braunii HOM05D005610 ORTHO05D001468 1.5e-19 99.8 112 44.6
FAN20G1916 Fragaria x ananassa HOM05D005610 ORTHO05D006181 2.0e-19 99.4 59 72.9
TPR.G7342 Trifolium pratense HOM05D005610 ORTHO05D006181 5.7e-19 97.8 57 77.2
Rhsim13G0147700 Rhododendron simsii HOM05D005610 ORTHO05D006181 1.3e-18 96.7 61 73.8
Pp3c3_34050 Physcomitrium patens HOM05D005610 ORTHO05D006181 3.7e-18 95.1 78 59.0
AagrBONN_evm.TU.Sc2ySwM_228.3334 Anthoceros agrestis HOM05D005610 ORTHO05D006181 8.3e-18 94.0 96 41.7
Sc16g0007910 Simmondsia chinensis HOM05D005610 ORTHO05D006181 2.0e-16 89.4 52 80.8
RcHm_v2.0_Chr7g0240721 Rosa chinensis HOM05D005610 ORTHO05D006181 6.5e-15 84.3 50 84.0
RcHm_v2.0_Chr7g0240711 Rosa chinensis HOM05D005610 ORTHO05D006181 4.7e-13 78.2 52 67.3
SEGI_27415 Sequoiadendron giganteum HOM05D005610 ORTHO05D006181 1.8e-09 66.2 60 55.0
Migut.M01383 Erythranthe guttata HOM05D005610 ORTHO05D006181 6.6e-07 57.8 58 44.8
CARHR125830 Cardamine hirsuta HOM05D005610 ORTHO05D006181 1.9e-06 56.2 38 57.9


User provided reference genes

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