Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib151G1142 Durio zibethinus HOM05D005239 ORTHO05D006698 3.3e-256 887.9 448 100.0
Gorai.006G218900 Gossypium raimondii HOM05D005239 ORTHO05D006698 6.7e-217 757.3 447 86.6
Gohir.D09G195500 Gossypium hirsutum HOM05D005239 ORTHO05D006698 4.3e-216 754.6 447 86.6
Gohir.A09G201600 Gossypium hirsutum HOM05D005239 ORTHO05D006698 3.7e-215 751.5 447 86.6
Thecc.04G216000 Theobroma cacao HOM05D005239 ORTHO05D006698 1.1e-214 750.0 442 87.1
COL.COLO4_20862 Corchorus olitorius HOM05D005239 ORTHO05D006698 2.9e-204 715.3 448 82.1
Duzib212G0896 Durio zibethinus HOM05D005239 ORTHO05D006698 5.3e-190 667.9 448 78.3
Hma1.2p1_0601F.1_g187220 Hydrangea macrophylla HOM05D005239 ORTHO05D006698 2.0e-165 586.3 465 67.7
MD08G1235300 Malus domestica HOM05D005239 ORTHO05D006698 2.0e-165 586.3 455 69.0
Atru.chr9.1540 Acer truncatum HOM05D005239 ORTHO05D006698 6.0e-165 584.7 433 72.3
Dinv43567 Davidia involucrata HOM05D005239 ORTHO05D006698 1.7e-164 583.2 411 72.0
MELO3C006242.2 Cucumis melo HOM05D005239 ORTHO05D006698 6.6e-164 581.3 459 68.2
PGR119G0794 Punica granatum HOM05D005239 ORTHO05D006698 1.2e-162 577.0 471 66.9
RcHm_v2.0_Chr6g0273481 Rosa chinensis HOM05D005239 ORTHO05D006698 2.3e-161 572.8 454 68.7
CSS0007844 Camellia sinensis var. sinensis HOM05D005239 ORTHO05D006698 3.1e-161 572.4 468 66.7
CsaV3_3G010220 Cucumis sativus L. HOM05D005239 ORTHO05D006698 5.2e-161 571.6 460 67.2
Actinidia21601 Actinidia chinensis HOM05D005239 ORTHO05D006698 8.9e-161 570.9 449 68.6
Dinv44000 Davidia involucrata HOM05D005239 ORTHO05D001060 1.5e-160 570.1 360 77.5
Cfa011001 Carpinus fangiana HOM05D002067 ORTHO05D001060 2.6e-160 569.3 445 67.6
TAR636G2805 Trochodendron aralioides HOM05D005239 ORTHO05D006698 1.7e-159 566.6 465 64.9
CiPaw.13G020400 Carya illinoinensis HOM05D005239 ORTHO05D006698 2.2e-159 566.2 462 67.5
TWI59G0212 Tripterygium wilfordii HOM05D005239 ORTHO05D006698 3.7e-159 565.5 464 68.1
FvH4_2g12720 Fragaria vesca HOM05D005239 ORTHO05D006698 8.3e-159 564.3 454 68.5
TWI14G1099 Tripterygium wilfordii HOM05D005239 ORTHO05D006698 1.9e-158 563.1 458 68.6
Sed0027364 Sechium edule HOM05D005239 ORTHO05D006698 5.4e-158 561.6 459 65.8
Ciclev10020370m.g Citrus clementina HOM05D005239 ORTHO05D006698 7.0e-158 561.2 362 77.9
GSVIVG01018386001 Vitis vinifera HOM05D005239 ORTHO05D006698 9.2e-158 560.8 446 69.1
Prupe.1G571600 Prunus persica HOM05D005239 ORTHO05D006698 2.1e-157 559.7 454 66.3
FAN27G2303 Fragaria x ananassa HOM05D005239 ORTHO05D006698 2.7e-157 559.3 469 67.0
Potri.002G216100 Populus trichocarpa HOM05D005239 ORTHO05D006698 7.8e-157 557.8 463 66.7
TAR629G3002 Trochodendron aralioides HOM05D005239 ORTHO05D006698 1.3e-156 557.0 451 65.6
Sed0010493 Sechium edule HOM05D005239 ORTHO05D006698 1.7e-156 556.6 462 65.4
Sabra02G0168400 Salix brachista HOM05D005239 ORTHO05D006698 5.1e-156 555.1 461 66.6
FAN15G3107 Fragaria x ananassa HOM05D005239 ORTHO05D006698 6.6e-156 554.7 469 66.3
Nn6g33642 Nelumbo nucifera HOM05D005239 ORTHO05D006698 6.6e-156 554.7 462 64.7
Nitab4.5_0004264g0020 Nicotiana tabacum HOM05D005239 ORTHO05D006698 5.6e-155 551.6 458 64.8
Rhsim01G0145300 Rhododendron simsii HOM05D005239 ORTHO05D006698 7.3e-155 551.2 490 61.6
vmacro21097 Vaccinium macrocarpon HOM05D005239 ORTHO05D006698 7.3e-155 551.2 453 65.1
ClCG05G002730 Citrullus lanatus HOM05D005239 ORTHO05D006698 4.7e-154 548.5 461 66.2
Peaxi162Scf01144g00013 Petunia axillaris HOM05D005239 ORTHO05D006698 1.2e-152 543.9 450 64.4
THA.LOC104802511 Tarenaya hassleriana HOM05D005239 ORTHO05D006698 4.4e-152 542.0 454 63.0
AUR62035533 Chenopodium quinoa HOM05D005239 ORTHO05D006698 1.7e-151 540.0 451 63.4
QL04p024849 Quercus lobata HOM05D005239 ORTHO05D006698 1.7e-151 540.0 376 73.4
Ah.06g191320 Amaranthus hybridus HOM05D005239 ORTHO05D006698 2.9e-151 539.3 448 63.8
Eucgr.H02846 Eucalyptus grandis HOM05D005239 ORTHO05D006698 2.9e-151 539.3 476 62.8
Manes.05G061000 Manihot esculenta HOM05D005239 ORTHO05D006698 3.7e-151 538.9 459 65.8
Glyma.20G243400 Glycine max HOM05D005239 ORTHO05D006698 1.1e-150 537.3 403 69.7
AUR62041654 Chenopodium quinoa HOM05D005239 ORTHO05D006698 1.9e-150 536.6 453 63.4
THA.LOC104817164 Tarenaya hassleriana HOM05D005239 ORTHO05D006698 1.9e-150 536.6 447 64.2
Solyc01g080860.3 Solanum lycopersicum HOM05D005239 ORTHO05D006698 3.2e-150 535.8 449 63.3
CANSAT54G1536 Cannabis sativa HOM05D005239 ORTHO05D006698 1.6e-149 533.5 453 64.9
Sopen01g032450 Solanum pennellii HOM05D005239 ORTHO05D006698 2.7e-149 532.7 449 63.3
CAN.G1480.7 Capsicum annuum HOM05D005239 ORTHO05D006698 4.6e-149 531.9 386 69.7
DCAR_029633 Daucus carota HOM05D005239 ORTHO05D006698 6.0e-149 531.6 393 69.0
Haze_02934 Corylus avellana HOM05D005239 ORTHO05D006698 7.8e-149 531.2 475 62.1
Sc20g0003020 Simmondsia chinensis HOM05D005239 ORTHO05D006698 7.8e-149 531.2 361 74.2
Lj5g0010357 Lotus japonicus HOM05D005239 ORTHO05D006698 5.1e-148 528.5 359 76.0
CDE04G1215 Ceratophyllum demersum HOM05D005239 ORTHO05D006698 1.1e-147 527.3 447 63.5
EL10Ac4g08842 Beta vulgaris HOM05D005239 ORTHO05D006698 3.3e-147 525.8 446 64.8
ECA234G1231 Erigeron canadensis HOM05D005239 ORTHO05D006698 3.3e-147 525.8 455 61.8
Cc02_g25930 Coffea canephora HOM05D005239 ORTHO05D006698 7.3e-147 524.6 450 63.6
arahy.Tifrunner.gnm1.ann1.X9CQTL Arachis hypogaea HOM05D005239 ORTHO05D006698 2.8e-146 522.7 359 74.4
arahy.Tifrunner.gnm1.ann1.XN1C7B Arachis hypogaea HOM05D005239 ORTHO05D006698 3.6e-146 522.3 359 74.4
Ca_11344_v3 Cicer arietinum L. HOM05D005239 ORTHO05D006698 6.2e-146 521.5 391 70.6
TPR.G10426 Trifolium pratense HOM05D005239 ORTHO05D006698 8.1e-146 521.2 361 74.5
Oeu002884.1 Olea europaea HOM05D005239 ORTHO05D006698 1.1e-145 520.8 529 55.2
Aa31LG1G26110 Aethionema arabicum HOM05D005239 ORTHO05D006698 2.4e-145 519.6 449 62.8
Thhalv10001456m.g Eutrema salsugineum HOM05D005239 ORTHO05D006698 2.4e-145 519.6 463 59.8
PGSC0003DMG400001672 Solanum tuberosum HOM05D005239 ORTHO05D006698 2.4e-145 519.6 476 59.2
Phvul.007G006700 Phaseolus vulgaris HOM05D005239 ORTHO05D006698 5.2e-145 518.5 450 63.1
BcaB06g29384 Brassica carinata HOM05D005239 ORTHO05D006698 8.9e-145 517.7 450 62.0
Medtr1g116110 Medicago truncatula HOM05D005239 ORTHO05D006698 1.2e-144 517.3 361 73.4
Lj9A547G68 Lonicera japonica HOM05D005239 ORTHO05D006698 7.6e-144 514.6 338 74.9
Lalb_Chr02g0143811 Lupinus albus HOM05D005239 ORTHO05D006698 9.9e-144 514.2 353 73.7
Aqoxy3G02472 Aquilegia oxysepala HOM05D005239 ORTHO05D006698 1.3e-143 513.8 385 69.1
AL4G43540 Arabidopsis lyrata HOM05D005239 ORTHO05D006698 2.2e-143 513.1 466 59.9
VMungo0720G0476 Vigna mungo HOM05D005239 ORTHO05D006698 2.2e-143 513.1 446 63.7
BraA04t18797Z Brassica rapa HOM05D005239 ORTHO05D006698 2.9e-143 512.7 457 61.1
Carub.0004s2708 Capsella rubella HOM05D005239 ORTHO05D006698 2.4e-142 509.6 463 59.4
BolC4t28610H Brassica oleracea HOM05D005239 ORTHO05D006698 5.4e-142 508.4 457 60.6
HanXRQChr17g0562471 Helianthus annuus HOM05D005239 ORTHO05D006698 7.1e-142 508.1 455 60.2
AT2G44520 Arabidopsis thaliana HOM05D005239 ORTHO05D006698 1.6e-141 506.9 469 59.3
BcaC02g07098 Brassica carinata HOM05D005239 ORTHO05D006698 1.6e-141 506.9 457 60.4
Psat6g232360 Pisum sativum HOM05D005239 ORTHO05D006698 1.6e-141 506.9 449 62.6
PSO170G2576 Papaver somniferum HOM05D005239 ORTHO05D006698 1.1e-139 500.7 471 58.2
PSO302G0170 Papaver somniferum HOM05D005239 ORTHO05D006698 1.5e-139 500.4 360 68.9
Sp4g26610 Schrenkiella parvula HOM05D005239 ORTHO05D006698 2.5e-139 499.6 458 59.8
SGA_v2.0_scaffold69G23296 Striga asiatica HOM05D005239 ORTHO05D006698 1.6e-138 496.9 356 71.9
HPP92_001886 Vanilla planifolia HOM05D005239 ORTHO05D006698 6.2e-138 495.0 365 69.0
SGA_v2.0_scaffold52G19274 Striga asiatica HOM05D005239 ORTHO05D006698 9.0e-137 491.1 356 70.8
ATR1153G024 Amborella trichopoda HOM05D005239 ORTHO05D006698 1.5e-136 490.3 362 67.1
unitig_26.g9718 Utricularia gibba HOM05D005239 ORTHO05D006698 9.9e-136 487.6 390 64.1
C04p05410 Brassica napus HOM05D005239 ORTHO05D006698 3.5e-133 479.2 354 68.9
BolC4t22181H Brassica oleracea HOM05D005239 ORTHO05D006698 3.5e-133 479.2 354 68.9
BcaNung07053 Brassica carinata HOM05D005239 ORTHO05D006698 4.6e-133 478.8 449 59.0
Os01g0527700 Oryza sativa ssp. japonica HOM05D005239 ORTHO05D006698 3.0e-132 476.1 367 66.5
Zm00001eb402310 Zea mays HOM05D005239 ORTHO05D006698 2.5e-131 473.0 354 68.9
Lsat_1_v5_gn_4_39040 Lactuca sativa HOM05D005239 ORTHO05D006698 9.0e-129 464.5 448 57.1
C04p71050 Brassica napus HOM05D000073 ORTHO05D006698 2.6e-128 463.0 342 69.3
Nitab4.5_0001476g0120 Nicotiana tabacum HOM05D005239 ORTHO05D006698 7.6e-128 461.5 457 57.3
A04p33360 Brassica napus HOM05D000073 ORTHO05D006698 9.9e-128 461.1 339 69.6
BcaC02g12301 Brassica carinata HOM05D005239 ORTHO05D006698 1.1e-126 457.6 370 64.3
MD15G1426600 Malus domestica HOM05D005239 ORTHO05D006698 2.7e-125 453.0 309 74.8
Zm00001eb005400 Zea mays HOM05D005239 ORTHO05D006698 6.2e-122 441.8 336 69.0
Actinidia33289 Actinidia chinensis HOM05D005239 ORTHO05D006698 4.6e-117 425.6 322 69.9
Cpa.g.sc20.28 Carica papaya HOM05D005239 ORTHO05D006698 3.9e-116 422.5 341 65.4
AagrBONN_evm.TU.Sc2ySwM_369.187 Anthoceros agrestis HOM05D005239 ORTHO05D006698 3.9e-108 396.0 358 56.1
Migut.B01467 Erythranthe guttata HOM05D005239 ORTHO05D006698 1.5e-107 394.0 334 63.2
SEGI_24425 Sequoiadendron giganteum HOM05D005239 ORTHO05D006698 2.5e-107 393.3 314 61.8
Hma1.2p1_0601F.1_g187230 Hydrangea macrophylla HOM05D005239 ORTHO05D006698 1.4e-102 377.5 302 69.9
SMO364G0841 Selaginella moellendorffii HOM05D005239 ORTHO05D006698 1.1e-99 367.9 350 52.9
Mapoly0029s0153 Marchantia polymorpha HOM05D005239 ORTHO05D006698 4.8e-98 362.5 361 52.4
CDE12G0888 Ceratophyllum demersum HOM05D005239 ORTHO05D006698 1.1e-94 351.3 247 72.9
CARHR139710 Cardamine hirsuta HOM05D005239 ORTHO05D006698 3.3e-91 339.7 250 68.4
CAN.G74.42 Capsicum annuum HOM05D005239 ORTHO05D006698 1.3e-87 327.8 301 57.8
PSO357G0304 Papaver somniferum HOM05D005239 ORTHO05D006698 1.2e-85 321.2 201 78.1
CBR_g3821 Chara braunii HOM05D005239 ORTHO05D006698 2.1e-85 320.5 332 50.3
Pp3c14_19200 Physcomitrium patens HOM05D005239 ORTHO05D006698 6.7e-84 315.5 261 60.2
Oeu037395.1 Olea europaea HOM05D005239 ORTHO05D006698 1.3e-74 284.6 300 55.7
BraA05t19443Z Brassica rapa HOM05D005239 ORTHO05D006698 1.3e-71 274.6 294 51.7
MD15G1426900 Malus domestica HOM05D005239 ORTHO05D006698 1.5e-70 271.2 192 69.8
A05p04670 Brassica napus HOM05D005239 ORTHO05D006698 1.2e-69 268.1 294 52.4
Cre12.g516350 Chlamydomonas reinhardtii HOM05D005239 ORTHO05D006698 3.4e-67 260.0 280 48.6
MCO03G363 Micromonas commoda HOM05D005239 ORTHO05D006698 2.0e-64 250.8 281 47.7
Aqoxy5G02001 Aquilegia oxysepala HOM05D005239 ORTHO05D006698 3.8e-63 246.5 172 73.3
PRCOL_00000009 Prasinoderma coloniale HOM05D005239 ORTHO05D006698 7.2e-62 242.3 346 41.9
BcaB02g08828 Brassica carinata HOM05D005239 ORTHO05D006698 3.7e-58 229.9 245 53.9
SHI13675 Sapria himalayana HOM05D005239 ORTHO05D006698 8.0e-53 212.2 201 58.2
FAN24G3432 Fragaria x ananassa HOM05D005239 ORTHO05D006698 3.6e-45 186.8 208 57.7
Cfa027222 Carpinus fangiana HOM05D005239 ORTHO05D006698 1.2e-37 161.8 296 37.2
PGR004G1759 Punica granatum HOM05D005239 ORTHO05D006698 4.6e-32 143.3 121 65.3
TPR.G37315 Trifolium pratense HOM05D005239 ORTHO05D006698 6.2e-29 132.9 83 71.1
PSO081G0040 Papaver somniferum HOM05D005239 ORTHO05D006698 1.5e-27 128.3 84 76.2
Glyma.10G293300 Glycine max HOM05D005239 ORTHO05D006698 6.4e-26 122.9 76 72.4
RcHm_v2.0_Chr6g0271171 Rosa chinensis HOM05D005239 ORTHO05D006698 5.6e-22 109.8 72 77.8
CDE12G0056 Ceratophyllum demersum HOM05D005239 ORTHO05D006698 3.1e-20 104.0 68 72.1
RcHm_v2.0_Chr7g0200821 Rosa chinensis HOM05D005239 ORTHO05D006698 9.0e-20 102.4 72 73.6
Cc02_g25970 Coffea canephora HOM05D005239 ORTHO05D006698 1.6e-13 81.6 99 45.5
SEGI_27712 Sequoiadendron giganteum HOM05D005239 ORTHO05D006698 1.2e-11 75.5 57 66.7
SHI13676 Sapria himalayana HOM05D005239 ORTHO05D006698 1.1e-09 68.9 85 52.9


User provided reference genes

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