Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib151G0960 Durio zibethinus HOM05D006322 ORTHO05D007716 2.0e-129 465.7 224 100.0
COL.COLO4_34636 Corchorus olitorius HOM05D006322 ORTHO05D007716 1.4e-109 399.8 221 85.5
Thecc.04G298700 Theobroma cacao HOM05D006322 ORTHO05D007716 3.3e-108 395.2 221 85.5
Duzib052G0456 Durio zibethinus HOM05D006322 ORTHO05D007716 5.3e-106 387.9 224 83.5
Gohir.A09G235000 Gossypium hirsutum HOM05D006322 ORTHO05D007716 6.8e-101 370.9 224 78.6
Gohir.D09G235800 Gossypium hirsutum HOM05D006322 ORTHO05D007716 1.2e-100 370.2 224 78.6
Gorai.006G258900 Gossypium raimondii HOM05D006322 ORTHO05D007716 9.8e-100 367.1 224 77.7
Atru.chr4.3025 Acer truncatum HOM05D006322 ORTHO05D007716 2.7e-94 349.0 222 73.9
Manes.03G203000 Manihot esculenta HOM05D006322 ORTHO05D007716 3.4e-92 342.0 222 73.4
QL06p011774 Quercus lobata HOM05D006322 ORTHO05D007716 4.4e-92 341.7 219 73.5
Oeu019970.1 Olea europaea HOM05D006322 ORTHO05D007716 2.8e-91 339.0 221 71.5
CiPaw.01G139400 Carya illinoinensis HOM05D006322 ORTHO05D007716 8.3e-91 337.4 213 72.3
Haze_01283 Corylus avellana HOM05D006322 ORTHO05D007716 4.1e-90 335.1 219 73.1
Cfa015332 Carpinus fangiana HOM05D006322 ORTHO05D007716 1.6e-89 333.2 219 72.6
Actinidia40367 Actinidia chinensis HOM05D006322 ORTHO05D007716 3.5e-89 332.0 216 74.1
MD16G1155500 Malus domestica HOM05D006322 ORTHO05D007716 7.7e-89 330.9 227 67.4
Peaxi162Scf00244g00413 Petunia axillaris HOM05D006322 ORTHO05D007716 7.7e-89 330.9 221 70.6
TAR636G2967 Trochodendron aralioides HOM05D006322 ORTHO05D007716 2.3e-88 329.3 218 72.0
Sopen11g003410 Solanum pennellii HOM05D006322 ORTHO05D007716 2.9e-88 328.9 222 68.5
Solyc11g007570.2 Solanum lycopersicum HOM05D006322 ORTHO05D007716 3.8e-88 328.6 222 68.0
PGSC0003DMG400027315 Solanum tuberosum HOM05D006322 ORTHO05D007716 5.0e-88 328.2 218 69.3
Cc03_g00960 Coffea canephora HOM05D006322 ORTHO05D007716 1.5e-87 326.6 223 68.2
Migut.N00046 Erythranthe guttata HOM05D006322 ORTHO05D007716 1.5e-87 326.6 219 68.5
Prupe.1G119400 Prunus persica HOM05D006322 ORTHO05D007716 1.5e-87 326.6 225 68.4
Ciclev10005751m.g Citrus clementina HOM05D006322 ORTHO05D007716 4.3e-87 325.1 222 70.7
arahy.Tifrunner.gnm1.ann1.WPA2XH Arachis hypogaea HOM05D006322 ORTHO05D007716 1.6e-86 323.2 218 69.7
ECA233G0552 Erigeron canadensis HOM05D006322 ORTHO05D007716 1.6e-86 323.2 219 68.9
Nitab4.5_0001807g0060 Nicotiana tabacum HOM05D006322 ORTHO05D007716 1.6e-86 323.2 220 68.2
CSS0012053 Camellia sinensis var. sinensis HOM05D006322 ORTHO05D007716 3.6e-86 322.0 220 68.6
arahy.Tifrunner.gnm1.ann1.57P81C Arachis hypogaea HOM05D006322 ORTHO05D007716 6.1e-86 321.2 218 69.3
SGA_v2.0_scaffold119G32659 Striga asiatica HOM05D006322 ORTHO05D007716 8.0e-86 320.9 212 68.4
Glyma.17G032700 Glycine max HOM05D006322 ORTHO05D007716 1.0e-85 320.5 223 68.6
Lalb_Chr13g0298441 Lupinus albus HOM05D006322 ORTHO05D007716 2.3e-85 319.3 218 67.9
MSTRG.24817 Avicennia marina HOM05D006322 ORTHO05D007716 3.0e-85 318.9 219 67.6
FAN07G2163 Fragaria x ananassa HOM05D006322 ORTHO05D007716 4.0e-85 318.5 215 67.4
TWI09G0431 Tripterygium wilfordii HOM05D006322 ORTHO05D007716 4.0e-85 318.5 221 70.1
PGR031G3552 Punica granatum HOM05D006322 ORTHO05D007716 5.2e-85 318.2 214 68.7
VMungo1215G3118 Vigna mungo HOM05D006322 ORTHO05D007716 5.2e-85 318.2 223 65.9
Phvul.003G113400 Phaseolus vulgaris HOM05D006322 ORTHO05D007716 6.8e-85 317.8 223 66.4
Nitab4.5_0002259g0050 Nicotiana tabacum HOM05D006322 ORTHO05D007716 8.9e-85 317.4 220 66.8
Medtr4g121940 Medicago truncatula HOM05D006322 ORTHO05D007716 2.0e-84 316.2 223 66.8
CANSAT78G1173 Cannabis sativa HOM05D006322 ORTHO05D007716 2.6e-84 315.8 217 71.4
HanXRQChr13g0395571 Helianthus annuus HOM05D006322 ORTHO05D007716 3.4e-84 315.5 224 68.8
EL10Ac3g05469 Beta vulgaris HOM05D006322 ORTHO05D007716 4.4e-84 315.1 219 68.5
RcHm_v2.0_Chr4g0424801 Rosa chinensis HOM05D006322 ORTHO05D007716 4.4e-84 315.1 215 66.5
Aqoxy2G02768 Aquilegia oxysepala HOM05D006322 ORTHO05D007716 9.8e-84 313.9 213 70.4
Cpa.g.sc9.74 Carica papaya HOM05D006322 ORTHO05D007716 1.7e-83 313.2 217 69.6
Eucgr.A00353 Eucalyptus grandis HOM05D006322 ORTHO05D007716 1.7e-83 313.2 214 69.6
Lju470A16T21 Lonicera japonica HOM05D006322 ORTHO05D007716 1.7e-83 313.2 216 69.0
Lj4g0019910 Lotus japonicus HOM05D006322 ORTHO05D007716 2.2e-83 312.8 223 67.7
SalBow5G5236 Salvia bowleyana HOM05D006322 ORTHO05D007716 2.2e-83 312.8 217 66.8
PSO357G0527 Papaver somniferum HOM05D006322 ORTHO05D007716 3.7e-83 312.0 217 65.9
Lsat_1_v5_gn_6_16821 Lactuca sativa HOM05D006322 ORTHO05D007716 4.9e-83 311.6 218 69.3
GSVIVG01035010001 Vitis vinifera HOM05D006322 ORTHO05D007716 2.4e-82 309.3 205 73.7
Psat4g024200 Pisum sativum HOM05D006322 ORTHO05D007716 3.2e-82 308.9 219 64.4
PSO170G6693 Papaver somniferum HOM05D006322 ORTHO05D007716 5.4e-82 308.1 217 66.8
Potri.008G106600 Populus trichocarpa HOM05D006322 ORTHO05D007716 5.4e-82 308.1 220 65.9
Hund11963 Selenicereus undatus HOM05D006322 ORTHO05D007716 5.4e-82 308.1 213 65.3
Sc25g0003310 Simmondsia chinensis HOM05D006322 ORTHO05D007716 9.2e-82 307.4 220 64.5
Ca_21447_v3 Cicer arietinum L. HOM05D006322 ORTHO05D007716 2.0e-81 306.2 223 64.1
Hma1.2p1_0078F.1_g040000 Hydrangea macrophylla HOM05D006322 ORTHO05D007716 3.5e-81 305.4 214 69.2
CsaV3_6G022370 Cucumis sativus L. HOM05D006322 ORTHO05D007716 1.3e-80 303.5 214 67.3
Sabra08G0080400 Salix brachista HOM05D006322 ORTHO05D007716 1.7e-80 303.1 220 64.5
Dinv44297 Davidia involucrata HOM05D006322 ORTHO05D007716 3.0e-80 302.4 185 76.8
Nn3g21692 Nelumbo nucifera HOM05D006322 ORTHO05D007716 6.6e-80 301.2 215 67.0
Psat4g024280 Pisum sativum HOM05D006322 ORTHO05D007716 3.3e-79 298.9 216 62.0
Carub.0003s1674 Capsella rubella HOM05D006322 ORTHO05D007716 7.3e-79 297.7 220 64.5
AL3G29970 Arabidopsis lyrata HOM05D006322 ORTHO05D007716 6.2e-78 294.7 220 64.1
MELO3C021273.2 Cucumis melo HOM05D006322 ORTHO05D007716 8.0e-78 294.3 214 65.9
vmacro08057 Vaccinium macrocarpon HOM05D006322 ORTHO05D007716 5.2e-77 291.6 225 62.7
BraA03t13148Z Brassica rapa HOM05D006322 ORTHO05D007716 1.2e-76 290.4 219 63.9
MBI19_g07237_MAGBIO Magnolia biondii HOM05D006322 ORTHO05D007716 1.5e-76 290.0 214 64.0
Rhsim04G0234900 Rhododendron simsii HOM05D006322 ORTHO05D007716 2.0e-76 289.7 220 64.1
AT3G16990 Arabidopsis thaliana HOM05D006322 ORTHO05D007716 2.6e-76 289.3 220 63.2
C03p48530 Brassica napus HOM05D006322 ORTHO05D007716 2.6e-76 289.3 220 63.2
Thhalv10021446m.g Eutrema salsugineum HOM05D006322 ORTHO05D007716 2.6e-76 289.3 220 62.3
BcaB04g18916 Brassica carinata HOM05D006322 ORTHO05D007716 5.8e-76 288.1 220 62.7
BcaC01g03797 Brassica carinata HOM05D006322 ORTHO05D007716 5.8e-76 288.1 220 62.7
A03p40000 Brassica napus HOM05D006322 ORTHO05D007716 5.8e-76 288.1 219 63.5
BolC3t17131H Brassica oleracea HOM05D006322 ORTHO05D007716 5.8e-76 288.1 220 62.7
CARHR092240 Cardamine hirsuta HOM05D006322 ORTHO05D007716 5.8e-76 288.1 222 62.2
FAN12G2263 Fragaria x ananassa HOM05D006322 ORTHO05D007716 7.5e-76 287.7 198 67.2
Aa31LG8G4030 Aethionema arabicum HOM05D006322 ORTHO05D007716 9.8e-76 287.3 220 62.7
ClCG06G004620 Citrullus lanatus HOM05D006322 ORTHO05D007716 1.1e-74 283.9 214 62.1
Sp3g15210 Schrenkiella parvula HOM05D006322 ORTHO05D007716 1.9e-74 283.1 216 61.6
Sed0017771 Sechium edule HOM05D006322 ORTHO05D007716 1.9e-74 283.1 213 63.4
DCAR_027007 Daucus carota HOM05D006322 ORTHO05D007716 2.0e-73 279.6 275 51.6
ATR0796G257 Amborella trichopoda HOM05D006322 ORTHO05D007716 2.1e-70 269.6 214 59.8
CAN.G135.71 Capsicum annuum HOM05D006322 ORTHO05D007716 3.6e-70 268.9 179 70.4
HPP92_001241 Vanilla planifolia HOM05D006322 ORTHO05D007716 6.2e-70 268.1 216 60.2
SEGI_24166 Sequoiadendron giganteum HOM05D006322 ORTHO05D007716 1.4e-69 266.9 220 58.6
BcaB04g18918 Brassica carinata HOM05D006322 ORTHO05D007716 7.5e-68 261.2 220 58.2
SHI00180 Sapria himalayana HOM05D006322 ORTHO05D007716 1.7e-67 260.0 244 52.0
DCAR_030477 Daucus carota HOM05D006322 ORTHO05D007716 6.4e-67 258.1 219 57.1
Os03g0306900 Oryza sativa ssp. japonica HOM05D006322 ORTHO05D007716 6.4e-67 258.1 212 57.1
FvH4_4g19550 Fragaria vesca HOM05D006322 ORTHO05D007716 1.4e-66 256.9 181 66.9
AUR62041396 Chenopodium quinoa HOM05D006322 ORTHO05D007716 1.3e-64 250.4 176 68.8
Peaxi162Scf00244g00510 Petunia axillaris HOM05D006322 ORTHO05D007716 3.9e-64 248.8 222 52.7
Zm00001eb396140 Zea mays HOM05D006322 ORTHO05D007716 1.9e-63 246.5 212 54.7
AUR62016124 Chenopodium quinoa HOM05D006322 ORTHO05D007716 4.3e-63 245.4 175 68.0
Actinidia27045 Actinidia chinensis HOM05D006322 ORTHO05D007716 4.4e-60 235.3 158 72.8
Ah.13g071980 Amaranthus hybridus HOM05D006322 ORTHO05D007716 3.7e-59 232.3 212 56.6
Solyc11g007560.2 Solanum lycopersicum HOM05D006322 ORTHO05D007716 1.6e-57 226.9 224 49.6
THA.LOC104802603 Tarenaya hassleriana HOM05D006322 ORTHO05D007716 3.5e-57 225.7 176 60.2
CAN.G135.72 Capsicum annuum HOM05D006322 ORTHO05D007716 3.9e-56 222.2 222 49.5
TAR362G0340 Trochodendron aralioides HOM05D006322 ORTHO05D007716 1.6e-54 216.9 215 51.2
SMO116G0484 Selaginella moellendorffii HOM05D006322 ORTHO05D007716 1.1e-53 214.2 212 49.1
Mapoly0003s0261 Marchantia polymorpha HOM05D006322 ORTHO05D007716 1.5e-52 210.3 217 43.3
Nitab4.5_0001807g0070 Nicotiana tabacum HOM05D006322 ORTHO05D007716 7.6e-52 208.0 211 48.8
TPR.G20694 Trifolium pratense HOM05D006322 ORTHO05D007716 3.8e-51 205.7 160 60.6
EL10Ac7g16563 Beta vulgaris HOM05D006322 ORTHO05D007716 8.4e-51 204.5 164 62.8
AagrBONN_evm.TU.Sc2ySwM_117.1930 Anthoceros agrestis HOM05D006322 ORTHO05D007716 2.7e-49 199.5 214 45.3
BcaB04g18915 Brassica carinata HOM05D001503 ORTHO05D003820 4.3e-47 192.2 188 53.2
Pp3c10_15580 Physcomitrium patens HOM05D006322 ORTHO05D007716 5.6e-47 191.8 214 45.3
Lalb_Chr20g0120881 Lupinus albus HOM05D006322 ORTHO05D007716 8.1e-46 188.0 141 61.7
PGSC0003DMG400040588 Solanum tuberosum HOM05D006322 ORTHO05D007716 8.7e-40 167.9 166 49.4
Actinidia15599 Actinidia chinensis HOM05D006322 ORTHO05D007716 3.3e-39 166.0 114 70.2
Atru.chr4.3023 Acer truncatum HOM05D006322 ORTHO05D007716 7.4e-31 138.3 82 80.5
CBR_g45493 Chara braunii HOM05D006322 ORTHO05D007716 3.7e-30 136.0 221 30.8
Glyma.07G240701 Glycine max HOM05D006322 ORTHO05D007716 9.3e-26 121.3 113 54.0
Cre09.g407600 Chlamydomonas reinhardtii HOM05D006322 ORTHO05D007716 3.3e-23 112.8 223 32.7
EL10Ac9g22265 Beta vulgaris HOM05D006322 ORTHO05D007716 1.3e-22 110.9 94 56.4
BcaB04g18920 Brassica carinata HOM05D006322 ORTHO05D007716 4.1e-13 79.3 80 55.0
Atru.chr4.2979 Acer truncatum HOM05D006322 ORTHO05D007716 1.0e-11 74.7 44 72.7
CANSAT54G0480 Cannabis sativa HOM05D006322 ORTHO05D007716 1.0e-11 74.7 96 46.9
EL10Ac1g02106 Beta vulgaris HOM05D006322 ORTHO05D007716 1.4e-10 70.9 55 61.8
Lalb_Chr20g0120891 Lupinus albus HOM05D006322 ORTHO05D007716 4.2e-10 69.3 44 65.9
PSO782G2289 Papaver somniferum HOM05D000256 ORTHO05D000119 3.9e-08 62.8 46 58.7


User provided reference genes

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