Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib151G0948 Durio zibethinus HOM05D006695 ORTHO05D008239 1.6e-123 446.0 218 100.0
Gorai.011G181900 Gossypium raimondii HOM05D006695 ORTHO05D008239 2.7e-115 418.7 219 93.6
Gohir.A10G105600 Gossypium hirsutum HOM05D006695 ORTHO05D008239 6.1e-115 417.5 219 93.2
Gohir.D10G163000 Gossypium hirsutum HOM05D006695 ORTHO05D008239 1.8e-114 416.0 219 93.2
Thecc.04G272900 Theobroma cacao HOM05D006695 ORTHO05D008239 9.2e-111 403.7 219 89.0
Cpa.g.sc16.75 Carica papaya HOM05D006695 ORTHO05D008239 3.5e-102 375.2 219 82.6
GSVIVG01017849001 Vitis vinifera HOM05D006695 ORTHO05D008239 3.5e-102 375.2 217 83.4
CiPaw.01G156500 Carya illinoinensis HOM05D006695 ORTHO05D008239 3.0e-101 372.1 219 82.6
CsaV3_3G013940 Cucumis sativus L. HOM05D006695 ORTHO05D008239 5.0e-101 371.3 219 81.7
CANSAT78G2164 Cannabis sativa HOM05D006695 ORTHO05D008239 1.1e-100 370.2 217 82.0
Ciclev10006973m.g Citrus clementina HOM05D006695 ORTHO05D008239 1.1e-100 370.2 217 82.9
QL06p006240 Quercus lobata HOM05D006695 ORTHO05D008239 2.5e-100 369.0 218 81.7
Atru.chr4.2706 Acer truncatum HOM05D006695 ORTHO05D008239 3.3e-100 368.6 217 83.9
Actinidia23450 Actinidia chinensis HOM05D006695 ORTHO05D008239 3.3e-100 368.6 214 82.7
Prupe.1G146500 Prunus persica HOM05D006695 ORTHO05D008239 5.6e-100 367.9 217 81.6
Sed0007686 Sechium edule HOM05D006695 ORTHO05D008239 2.1e-99 365.9 219 80.8
Cfa015538 Carpinus fangiana HOM05D006695 ORTHO05D008239 2.8e-99 365.5 223 79.4
Haze_01012 Corylus avellana HOM05D006695 ORTHO05D008239 4.7e-99 364.8 223 80.3
Manes.03G188400 Manihot esculenta HOM05D006695 ORTHO05D008239 8.0e-99 364.0 217 81.6
PGR004G1570 Punica granatum HOM05D006695 ORTHO05D008239 8.0e-99 364.0 219 81.7
RcHm_v2.0_Chr4g0420161 Rosa chinensis HOM05D006695 ORTHO05D008239 1.0e-98 363.6 217 80.6
TWI09G1388 Tripterygium wilfordii HOM05D006695 ORTHO05D008239 1.0e-98 363.6 215 80.5
TPR.G28124 Trifolium pratense HOM05D006695 ORTHO05D008239 1.4e-98 363.2 217 80.6
MELO3C006586.2 Cucumis melo HOM05D006695 ORTHO05D008239 6.8e-98 360.9 234 76.1
TAR362G0795 Trochodendron aralioides HOM05D006695 ORTHO05D008239 8.9e-98 360.5 215 80.9
Glyma.17G020700 Glycine max HOM05D006695 ORTHO05D008239 1.5e-97 359.8 217 81.1
MD13G1177300 Malus domestica HOM05D006695 ORTHO05D008239 2.0e-97 359.4 217 78.8
VMungo1215G2645 Vigna mungo HOM05D006695 ORTHO05D008239 2.6e-97 359.0 217 81.1
FvH4_4g16710 Fragaria vesca HOM05D006695 ORTHO05D008239 4.4e-97 358.2 217 79.7
Hma1.2p1_0643F.1_g194500 Hydrangea macrophylla HOM05D006695 ORTHO05D008239 4.4e-97 358.2 213 82.6
Lj3A806T51 Lonicera japonica HOM05D006695 ORTHO05D008239 4.4e-97 358.2 216 81.5
Medtr4g118420 Medicago truncatula HOM05D006695 ORTHO05D008239 5.8e-97 357.8 217 79.3
Psat4g028960 Pisum sativum HOM05D006695 ORTHO05D008239 5.8e-97 357.8 219 78.5
FAN07G1129 Fragaria x ananassa HOM05D006695 ORTHO05D008239 1.3e-96 356.7 217 79.3
FAN22G2065 Fragaria x ananassa HOM05D006695 ORTHO05D008239 1.7e-96 356.3 212 80.2
Oeu044811.1 Olea europaea HOM05D006695 ORTHO05D008239 1.7e-96 356.3 212 80.7
FAN17G3101 Fragaria x ananassa HOM05D006695 ORTHO05D008239 2.2e-96 355.9 217 78.8
Lalb_Chr12g0196371 Lupinus albus HOM05D006695 ORTHO05D008239 2.9e-96 355.5 218 78.4
Potri.008G198200 Populus trichocarpa HOM05D006695 ORTHO05D008239 2.9e-96 355.5 219 79.5
Peaxi162Scf00095g00413 Petunia axillaris HOM05D006695 ORTHO05D008239 3.7e-96 355.1 213 79.8
Sopen01g032270 Solanum pennellii HOM05D006695 ORTHO05D008239 8.3e-96 354.0 215 77.7
PGSC0003DMG400032106 Solanum tuberosum HOM05D006695 ORTHO05D008239 8.3e-96 354.0 215 77.7
CSS0029139 Camellia sinensis var. sinensis HOM05D002837 ORTHO05D008239 1.1e-95 353.6 215 80.9
DCAR_022857 Daucus carota HOM05D006695 ORTHO05D008239 1.1e-95 353.6 218 78.9
Eucgr.H03643 Eucalyptus grandis HOM05D006695 ORTHO05D008239 1.1e-95 353.6 218 78.9
CAN.G889.4 Capsicum annuum HOM05D006695 ORTHO05D008239 1.9e-95 352.8 215 77.7
Phvul.003G098300 Phaseolus vulgaris HOM05D006695 ORTHO05D008239 1.9e-95 352.8 217 80.2
THA.LOC104821758 Tarenaya hassleriana HOM05D006695 ORTHO05D008239 3.2e-95 352.1 220 77.7
MSTRG.24766 Avicennia marina HOM05D006695 ORTHO05D008239 7.0e-95 350.9 212 77.8
Solyc01g080470.3 Solanum lycopersicum HOM05D006695 ORTHO05D008239 9.2e-95 350.5 215 77.2
Aqoxy5G00568 Aquilegia oxysepala HOM05D006695 ORTHO05D008239 1.2e-94 350.1 215 78.1
Cc03_g02720 Coffea canephora HOM05D006695 ORTHO05D008239 2.0e-94 349.4 212 79.2
Nitab4.5_0000059g0220 Nicotiana tabacum HOM05D006695 ORTHO05D008239 2.7e-94 349.0 216 79.6
Sc25g0004560 Simmondsia chinensis HOM05D006695 ORTHO05D008239 3.0e-93 345.5 218 77.5
SGA_v2.0_scaffold89G27581 Striga asiatica HOM05D006695 ORTHO05D008239 3.0e-93 345.5 212 76.9
EL10Ac3g06533 Beta vulgaris HOM05D006695 ORTHO05D008239 6.6e-93 344.4 213 77.5
Carub.0007s2636 Capsella rubella HOM05D006695 ORTHO05D008239 6.6e-93 344.4 222 74.8
ClCG05G005600 Citrullus lanatus HOM05D006695 ORTHO05D008239 8.6e-93 344.0 204 80.9
AL7G40000 Arabidopsis lyrata HOM05D006695 ORTHO05D008239 1.5e-92 343.2 222 74.8
Sabra08G0162200 Salix brachista HOM05D006695 ORTHO05D008239 1.5e-92 343.2 219 78.1
Thhalv10026193m.g Eutrema salsugineum HOM05D006695 ORTHO05D008239 1.9e-92 342.8 220 74.1
A03p49160 Brassica napus HOM05D006695 ORTHO05D008239 2.5e-92 342.4 220 75.0
Lj4g0002890 Lotus japonicus HOM05D006695 ORTHO05D008239 2.5e-92 342.4 219 75.8
AT4G15520 Arabidopsis thaliana HOM05D006695 ORTHO05D008239 3.3e-92 342.0 219 75.3
HanXRQChr08g0235981 Helianthus annuus HOM05D006695 ORTHO05D008239 7.3e-92 340.9 216 75.9
BcaC06g32939 Brassica carinata HOM05D006695 ORTHO05D008239 9.5e-92 340.5 219 74.4
CARHR222310 Cardamine hirsuta HOM05D006695 ORTHO05D008239 9.5e-92 340.5 217 75.6
Migut.N00136 Erythranthe guttata HOM05D006695 ORTHO05D008239 9.5e-92 340.5 212 75.9
C01p27440 Brassica napus HOM05D006695 ORTHO05D008239 2.1e-91 339.3 217 74.7
PSO832G0924 Papaver somniferum HOM05D006695 ORTHO05D008239 3.6e-91 338.6 218 73.9
A01p22050 Brassica napus HOM05D006695 ORTHO05D008239 6.2e-91 337.8 217 74.2
BraA01t02111Z Brassica rapa HOM05D006695 ORTHO05D008239 6.2e-91 337.8 217 74.2
Sp7g13770 Schrenkiella parvula HOM05D006695 ORTHO05D008239 6.2e-91 337.8 220 71.8
BcaNung00267 Brassica carinata HOM05D006695 ORTHO05D008239 1.1e-90 337.0 217 73.7
AUR62040724 Chenopodium quinoa HOM05D006695 ORTHO05D008239 1.4e-90 336.7 210 76.7
Aa31LG9G1920 Aethionema arabicum HOM05D006695 ORTHO05D008239 1.8e-90 336.3 209 75.6
ECA233G4227 Erigeron canadensis HOM05D006695 ORTHO05D008239 1.8e-90 336.3 216 75.5
BraA03t14010Z Brassica rapa HOM05D006695 ORTHO05D008239 2.3e-90 335.9 220 74.1
Lsat_1_v5_gn_6_64520 Lactuca sativa HOM05D006695 ORTHO05D008239 2.3e-90 335.9 214 77.1
BolC1t02683H Brassica oleracea HOM05D006695 ORTHO05D008239 4.0e-90 335.1 217 73.3
PSO210G1829 Papaver somniferum HOM05D006695 ORTHO05D008239 5.2e-90 334.7 218 72.9
BcaC09g50242 Brassica carinata HOM05D006695 ORTHO05D008239 8.9e-90 334.0 217 73.3
BcaC09g50247 Brassica carinata HOM05D006695 ORTHO05D008239 8.9e-90 334.0 217 73.3
SalBow5G4654 Salvia bowleyana HOM05D006695 ORTHO05D008239 8.9e-90 334.0 212 76.4
SalBow5G4989 Salvia bowleyana HOM05D006695 ORTHO05D008239 8.9e-90 334.0 212 76.4
CDE02G2295 Ceratophyllum demersum HOM05D006695 ORTHO05D008239 1.7e-88 329.7 209 75.1
Sed0005422 Sechium edule HOM05D006695 ORTHO05D008239 1.1e-84 317.0 205 76.6
Nitab4.5_0006860g0010 Nicotiana tabacum HOM05D006695 ORTHO05D008239 4.7e-83 311.6 213 74.2
unitig_8.g3083 Utricularia gibba HOM05D006695 ORTHO05D008239 8.1e-83 310.8 213 70.4
Os05g0141400 Oryza sativa ssp. japonica HOM05D006695 ORTHO05D008239 1.1e-82 310.5 217 69.1
HPP92_016066 Vanilla planifolia HOM05D006695 ORTHO05D008239 2.3e-82 309.3 215 68.8
Zm00001eb108650 Zea mays HOM05D006695 ORTHO05D008239 3.4e-81 305.4 217 68.2
BcaC06g33413 Brassica carinata HOM05D006695 ORTHO05D008239 2.9e-80 302.4 220 68.2
SHI00328 Sapria himalayana HOM05D006695 ORTHO05D008239 8.4e-80 300.8 215 71.2
SEGI_18217 Sequoiadendron giganteum HOM05D006695 ORTHO05D008239 7.1e-79 297.7 198 70.2
CDE08G0351 Ceratophyllum demersum HOM05D006695 ORTHO05D008239 3.9e-77 292.0 219 65.8
ATR0580G301 Amborella trichopoda HOM05D006695 ORTHO05D008239 5.1e-77 291.6 207 68.6
C07p47200 Brassica napus HOM05D006695 ORTHO05D008239 2.8e-75 285.8 193 71.0
AagrBONN_evm.TU.Sc2ySwM_228.600 Anthoceros agrestis HOM05D006695 ORTHO05D008239 1.2e-73 280.4 184 69.6
Mapoly0001s0064 Marchantia polymorpha HOM05D006695 ORTHO05D008239 5.8e-73 278.1 192 67.2
BolC7t45242H Brassica oleracea HOM05D006695 ORTHO05D008239 3.8e-72 275.4 192 69.8
SMO347G0043 Selaginella moellendorffii HOM05D006695 ORTHO05D008239 3.2e-71 272.3 206 65.0
FAN12G3773 Fragaria x ananassa HOM05D006695 ORTHO05D008239 5.1e-69 265.0 262 56.1
Pp3c22_4480 Physcomitrium patens HOM05D006695 ORTHO05D008239 1.3e-67 260.4 191 67.5
Ca_21564_v3 Cicer arietinum L. HOM05D003956 ORTHO05D004850 2.6e-65 252.7 144 84.7
Dinv38348 Davidia involucrata HOM05D006695 ORTHO05D008239 8.4e-64 247.7 148 77.0
Hma1.2p1_0643F.1_g194510 Hydrangea macrophylla HOM05D006695 ORTHO05D008239 3.0e-61 239.2 147 76.9
MD16G1178900 Malus domestica HOM05D006695 ORTHO05D008239 4.3e-60 235.3 149 72.5
vmacro08234 Vaccinium macrocarpon HOM05D006695 ORTHO05D008239 1.6e-59 233.4 150 73.3
Cre05.g238950 Chlamydomonas reinhardtii HOM05D006695 ORTHO05D008239 4.9e-56 221.9 177 57.6
MCO16G273 Micromonas commoda HOM05D006695 ORTHO05D008239 2.2e-48 196.4 191 48.7
FAN12G1880 Fragaria x ananassa HOM05D006695 ORTHO05D008239 5.7e-44 181.8 103 85.4
PRCOL_00001113 Prasinoderma coloniale HOM05D006695 ORTHO05D008239 3.9e-37 159.1 203 46.3
arahy.Tifrunner.gnm1.ann1.5C91KI Arachis hypogaea HOM05D006695 ORTHO05D008239 2.6e-28 129.8 66 90.9
SEGI_22589 Sequoiadendron giganteum HOM05D006695 ORTHO05D008239 1.1e-26 124.4 88 64.8
Glyma.06G247300 Glycine max HOM05D006695 ORTHO05D008239 5.9e-25 118.6 85 70.6
CBR_g29509 Chara braunii HOM05D006695 ORTHO05D008239 5.0e-24 115.5 96 59.4
ATR0235G001 Amborella trichopoda HOM05D006695 ORTHO05D008239 6.5e-24 115.2 67 77.6
CBR_g29507 Chara braunii HOM05D006695 ORTHO05D008239 2.1e-22 110.2 87 60.9
MD13G1177100 Malus domestica HOM05D006695 ORTHO05D008239 5.9e-17 92.0 67 61.2
Oeu037660.1 Olea europaea HOM05D006695 ORTHO05D008239 8.8e-13 78.2 148 34.5
arahy.Tifrunner.gnm1.ann1.A7EL5Y Arachis hypogaea HOM05D003181 ORTHO05D003689 2.7e-09 66.6 41 70.7
C09p61730 Brassica napus HOM05D006539 ORTHO05D008694 5.0e-08 62.4 142 30.3
BcaC04g24242 Brassica carinata HOM05D006539 ORTHO05D008694 6.5e-08 62.0 142 29.6
A10p23500 Brassica napus HOM05D006539 ORTHO05D008694 6.5e-08 62.0 142 29.6
BolC9t59012H Brassica oleracea HOM05D006539 ORTHO05D008694 1.5e-07 60.8 142 29.6
ECA232G1677 Erigeron canadensis HOM05D006539 ORTHO05D008694 9.4e-07 58.2 142 29.6
BraA10t44417Z Brassica rapa HOM05D006539 ORTHO05D008694 6.1e-06 55.5 151 27.8


User provided reference genes

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