Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib151G0940 Durio zibethinus HOM05D006719 ORTHO05D007063 4.5e-53 211.5 147 100.0
Thecc.04G284000 Theobroma cacao HOM05D006719 ORTHO05D007063 8.0e-42 174.1 147 87.1
COL.COLO4_13881 Corchorus olitorius HOM05D006719 ORTHO05D007063 2.2e-39 166.0 147 85.0
Duzib212G0625 Durio zibethinus HOM05D006719 ORTHO05D007063 4.8e-39 164.9 147 86.4
Gorai.006G263400 Gossypium raimondii HOM05D006719 ORTHO05D007063 1.6e-37 159.8 148 82.4
Gorai.011G189600 Gossypium raimondii HOM05D006719 ORTHO05D007063 3.2e-35 152.1 147 83.7
Gohir.D10G170100 Gossypium hirsutum HOM05D006719 ORTHO05D007063 2.1e-34 149.4 147 83.0
Gohir.A10G163700 Gossypium hirsutum HOM05D006719 ORTHO05D007063 6.7e-33 144.4 147 79.6
Duzib052G0445 Durio zibethinus HOM05D006719 ORTHO05D007063 2.0e-32 142.9 145 80.0
Ciclev10006148m.g Citrus clementina HOM05D006719 ORTHO05D007063 7.0e-30 134.4 142 75.4
Cfa015380 Carpinus fangiana HOM05D006719 ORTHO05D007063 6.5e-28 127.9 150 52.7
CSS0008404 Camellia sinensis var. sinensis HOM05D006719 ORTHO05D007063 1.6e-26 123.2 147 69.4
CSS0019267 Camellia sinensis var. sinensis HOM05D006719 ORTHO05D007063 1.6e-26 123.2 147 69.4
CiPaw.01G149100 Carya illinoinensis HOM05D006719 ORTHO05D007063 1.4e-25 120.2 149 50.3
Gohir.A09G239500 Gossypium hirsutum HOM05D006719 ORTHO05D007063 6.8e-25 117.9 109 87.2
Potri.008G207500 Populus trichocarpa HOM05D006719 ORTHO05D007063 1.5e-24 116.7 133 70.7
Atru.chr4.2828 Acer truncatum HOM05D006719 ORTHO05D007063 2.0e-24 116.3 148 71.6
GSVIVG01017752001 Vitis vinifera HOM05D006719 ORTHO05D007063 7.5e-24 114.4 153 69.9
Gohir.D09G240400 Gossypium hirsutum HOM05D006719 ORTHO05D007063 9.8e-24 114.0 109 85.3
vmacro08144 Vaccinium macrocarpon HOM05D006719 ORTHO05D007063 2.2e-23 112.8 148 69.6
vmacro22972 Vaccinium macrocarpon HOM05D006719 ORTHO05D007063 2.2e-23 112.8 148 69.6
Cpa.g.sc16.165 Carica papaya HOM05D006719 ORTHO05D007063 2.8e-23 112.5 149 69.8
Manes.03G194500 Manihot esculenta HOM05D006719 ORTHO05D007063 3.7e-23 112.1 147 66.7
Potri.010G024600 Populus trichocarpa HOM05D006719 ORTHO05D007063 7.0e-22 107.8 149 64.4
Dinv44385 Davidia involucrata HOM05D006719 ORTHO05D007063 9.1e-22 107.5 151 65.6
THA.LOC104821772 Tarenaya hassleriana HOM05D006719 ORTHO05D007063 2.0e-21 106.3 132 67.4
VMungo1309G0351 Vigna mungo HOM05D006719 ORTHO05D007063 3.5e-21 105.5 134 70.1
DCAR_030531 Daucus carota HOM05D006719 ORTHO05D007063 5.9e-21 104.8 136 66.9
Manes.15G012900 Manihot esculenta HOM05D006719 ORTHO05D007063 7.7e-21 104.4 149 66.4
Oeu037752.1 Olea europaea HOM05D006719 ORTHO05D007063 5.0e-20 101.7 145 65.5
Prupe.1G137900 Prunus persica HOM05D006719 ORTHO05D007063 8.6e-20 100.9 147 66.7
Dinv29768 Davidia involucrata HOM05D001303 ORTHO05D001129 1.1e-19 100.5 128 71.1
CiPaw.02G083300 Carya illinoinensis HOM05D006719 ORTHO05D007063 1.9e-19 99.8 130 68.5
Hma1.2p1_2670F.1_g326650 Hydrangea macrophylla HOM05D006719 ORTHO05D007063 3.3e-19 99.0 147 63.3
Actinidia40259 Actinidia chinensis HOM05D006719 ORTHO05D007063 7.2e-19 97.8 147 63.3
MD13G1169300 Malus domestica HOM05D006719 ORTHO05D007063 7.2e-19 97.8 129 69.8
Peaxi162Scf00534g00017 Petunia axillaris HOM05D006719 ORTHO05D007063 7.2e-19 97.8 151 43.7
Solyc01g066900.4 Solanum lycopersicum HOM05D006719 ORTHO05D007063 7.2e-19 97.8 149 64.4
MSTRG.21797 Avicennia marina HOM05D006719 ORTHO05D007063 3.6e-18 95.5 130 66.9
Sabra10G0014400 Salix brachista HOM05D006719 ORTHO05D007063 6.1e-18 94.7 177 41.8
TAR365G1095 Trochodendron aralioides HOM05D006719 ORTHO05D007063 6.1e-18 94.7 141 64.5
Sopen01g028510 Solanum pennellii HOM05D006719 ORTHO05D007063 6.8e-17 91.3 149 62.4
MD16G1170500 Malus domestica HOM05D006719 ORTHO05D007063 2.0e-16 89.7 130 66.2
Carub.0007s2587 Capsella rubella HOM05D006719 ORTHO05D007063 2.6e-16 89.4 148 61.5
MBI19_g42338_MAGBIO Magnolia biondii HOM05D006719 ORTHO05D007063 2.6e-16 89.4 178 55.1
QL06p008791 Quercus lobata HOM05D006719 ORTHO05D007063 2.6e-16 89.4 129 69.8
TWI09G1121 Tripterygium wilfordii HOM05D006719 ORTHO05D007063 3.4e-16 89.0 150 62.7
FAN17G0015 Fragaria x ananassa HOM05D006719 ORTHO05D007063 7.5e-16 87.8 156 41.0
Lj6g0006694 Lotus japonicus HOM05D006719 ORTHO05D007063 9.8e-16 87.4 150 65.3
BraA01t02080Z Brassica rapa HOM05D020768 ORTHO05D007063 4.9e-15 85.1 178 50.0
BraA08t33189Z Brassica rapa HOM05D006719 ORTHO05D007063 6.3e-15 84.7 136 64.0
PSO170G6252 Papaver somniferum HOM05D006719 ORTHO05D007063 1.1e-14 84.0 134 61.9
Nn4g25876 Nelumbo nucifera HOM05D006719 ORTHO05D007063 1.4e-14 83.6 133 60.2
TWI53G1176 Tripterygium wilfordii HOM05D006719 ORTHO05D007063 1.4e-14 83.6 152 61.8
FAN07G2874 Fragaria x ananassa HOM05D006719 ORTHO05D007063 1.8e-14 83.2 152 40.8
TAR362G0876 Trochodendron aralioides HOM05D006719 ORTHO05D007063 1.8e-14 83.2 124 62.9
PSO210G7501 Papaver somniferum HOM05D006719 ORTHO05D007063 2.4e-14 82.8 134 64.2
Migut.G00270 Erythranthe guttata HOM05D006719 ORTHO05D007063 5.4e-14 81.6 97 78.4
SalBow2G1281 Salvia bowleyana HOM05D006719 ORTHO05D007063 5.4e-14 81.6 67 64.2
SGA_v2.0_scaffold147G36286 Striga asiatica HOM05D006719 ORTHO05D007063 5.4e-14 81.6 110 65.5
HanXRQChr08g0227651 Helianthus annuus HOM05D006719 ORTHO05D007063 7.0e-14 81.3 128 60.9
BcaC07g37932 Brassica carinata HOM05D006719 ORTHO05D007063 4.5e-13 78.6 117 42.7
BolC8t48317H Brassica oleracea HOM05D006719 ORTHO05D007063 4.5e-13 78.6 117 42.7
ECA233G1326 Erigeron canadensis HOM05D006719 ORTHO05D007063 4.5e-13 78.6 109 67.9
Peaxi162Scf00024g00041 Petunia axillaris HOM05D006719 ORTHO05D007063 4.5e-13 78.6 148 58.1
Thhalv10026485m.g Eutrema salsugineum HOM05D006719 ORTHO05D007063 5.9e-13 78.2 148 59.5
Psat1g153440 Pisum sativum HOM05D006719 ORTHO05D007063 5.9e-13 78.2 150 59.3
Ca_01942_v3 Cicer arietinum L. HOM05D006719 ORTHO05D007063 7.8e-13 77.8 131 64.9
MBI19_g20884_MAGBIO Magnolia biondii HOM05D006719 ORTHO05D007063 7.8e-13 77.8 161 57.1
Lalb_Chr15g0083521 Lupinus albus HOM05D006719 ORTHO05D007063 1.0e-12 77.4 148 62.8
PGSC0003DMG400011322 Solanum tuberosum HOM05D006719 ORTHO05D007063 1.0e-12 77.4 149 59.7
CANSAT78G1100 Cannabis sativa HOM05D006719 ORTHO05D007063 1.7e-12 76.6 147 61.9
Nn3g21430 Nelumbo nucifera HOM05D006719 ORTHO05D007063 1.7e-12 76.6 149 55.0
A08p11980 Brassica napus HOM05D006719 ORTHO05D007063 2.9e-12 75.9 54 68.5
Phvul.009G247500 Phaseolus vulgaris HOM05D006719 ORTHO05D007063 3.8e-12 75.5 132 64.4
FAN12G0931 Fragaria x ananassa HOM05D006719 ORTHO05D007063 8.6e-12 74.3 149 57.7
Peaxi162Scf00024g00231 Petunia axillaris HOM05D006719 ORTHO05D007063 8.6e-12 74.3 132 59.1
RcHm_v2.0_Chr4g0422101 Rosa chinensis HOM05D006719 ORTHO05D007063 1.5e-11 73.6 135 58.5
MBI18_g14088_MAGBIO Magnolia biondii HOM05D000713 ORTHO05D000547 2.5e-11 72.8 134 41.0
Aa31LG10G6320 Aethionema arabicum HOM05D006719 ORTHO05D007063 3.3e-11 72.4 148 59.5
AL7G39510 Arabidopsis lyrata HOM05D006719 ORTHO05D007063 4.3e-11 72.0 145 57.9
FvH4_4g17930 Fragaria vesca HOM05D006719 ORTHO05D007063 1.6e-10 70.1 149 56.4
Sp7g14160 Schrenkiella parvula HOM05D006719 ORTHO05D007063 1.6e-10 70.1 151 57.6
HPP92_017216 Vanilla planifolia HOM05D006719 ORTHO05D007063 2.8e-10 69.3 102 50.0
Zm00001eb137600 Zea mays HOM05D006719 ORTHO05D007063 2.8e-10 69.3 125 52.0
Sed0003703 Sechium edule HOM05D006719 ORTHO05D007063 4.7e-10 68.6 146 59.6
Actinidia01465 Actinidia chinensis HOM05D006719 ORTHO05D007063 1.4e-09 67.0 65 60.0
CARHR290290 Cardamine hirsuta HOM05D006719 ORTHO05D007063 2.3e-09 66.2 128 60.2
Sed0000550 Sechium edule HOM05D006719 ORTHO05D007063 2.3e-09 66.2 143 55.9
THA.LOC104820261 Tarenaya hassleriana HOM05D006719 ORTHO05D007063 2.3e-09 66.2 139 59.0
FAN12G0915 Fragaria x ananassa HOM05D006719 ORTHO05D007063 4.0e-09 65.5 131 59.5
Glyma.15G147300 Glycine max HOM05D006719 ORTHO05D007063 6.8e-09 64.7 124 64.5
unitig_37.g12394 Utricularia gibba HOM05D006719 ORTHO05D007063 8.9e-09 64.3 102 67.6
Aqoxy2G03000 Aquilegia oxysepala HOM05D000520 ORTHO05D000399 1.2e-08 63.9 150 52.7
ClCG05G006040 Citrullus lanatus HOM05D006719 ORTHO05D007063 1.2e-08 63.9 161 54.0
CsaV3_3G014580 Cucumis sativus L. HOM05D006719 ORTHO05D007063 1.2e-08 63.9 153 55.6
AUR62040366 Chenopodium quinoa HOM05D006719 ORTHO05D007063 1.5e-08 63.5 64 64.1
Nitab4.5_0000960g0100 Nicotiana tabacum HOM05D006719 ORTHO05D007063 3.4e-08 62.4 151 52.3
MELO3C006659.2 Cucumis melo HOM05D006719 ORTHO05D007063 4.4e-08 62.0 158 55.1
TPR.G425 Trifolium pratense HOM05D006719 ORTHO05D007063 7.5e-08 61.2 132 62.1
Ah.13g074890 Amaranthus hybridus HOM05D006719 ORTHO05D007063 3.7e-07 58.9 43 69.8
Glyma.09G045300 Glycine max HOM05D006719 ORTHO05D007063 4.9e-07 58.5 150 56.0
Medtr2g436860 Medicago truncatula HOM05D006719 ORTHO05D007063 6.4e-07 58.2 146 55.5
CAN.G129.20 Capsicum annuum HOM05D006719 ORTHO05D007063 1.1e-06 57.4 137 55.5
Os12g0541400 Oryza sativa ssp. japonica HOM05D006719 ORTHO05D007063 1.1e-06 57.4 86 73.3
Aqoxy5G00712 Aquilegia oxysepala HOM05D006719 ORTHO05D007063 2.4e-06 56.2 143 51.0
CDE02G4366 Ceratophyllum demersum HOM05D065966 ORTHO05D007063 2.4e-06 56.2 131 47.3
Pp3c22_17550 Physcomitrium patens HOM05D039838 ORTHO05D007063 2.4e-06 56.2 43 65.1
Sc19g0005170 Simmondsia chinensis HOM05D006719 ORTHO05D007063 2.4e-06 56.2 129 57.4
Eucgr.B01308 Eucalyptus grandis HOM05D006719 ORTHO05D007063 3.2e-06 55.8 139 54.7
AT4G15790 Arabidopsis thaliana HOM05D006719 ORTHO05D007063 4.1e-06 55.5 148 54.7
Hund20562 Selenicereus undatus HOM05D006719 ORTHO05D007063 5.4e-06 55.1 171 46.2
Nitab4.5_0005076g0040 Nicotiana tabacum HOM05D006719 ORTHO05D007063 7.0e-06 54.7 147 51.7


User provided reference genes

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