Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib151G0914 Durio zibethinus HOM05D007768 ORTHO05D009831 1.3e-65 253.8 234 100.0
Duzib212G0147 Durio zibethinus HOM05D007768 ORTHO05D009831 2.4e-32 143.3 228 78.5
Gohir.D09G205201 Gossypium hirsutum HOM05D007768 ORTHO05D009831 1.2e-28 131.0 227 70.9
COL.COLO4_12975 Corchorus olitorius HOM05D007768 ORTHO05D009831 3.6e-28 129.4 224 76.3
Gohir.A09G211750 Gossypium hirsutum HOM05D007768 ORTHO05D009831 3.3e-26 122.9 220 70.0
CiPaw.09G024100 Carya illinoinensis HOM05D007768 ORTHO05D009831 7.0e-24 115.2 245 61.6
Duzib175G0003 Durio zibethinus HOM05D007768 ORTHO05D009831 7.7e-23 111.7 228 51.3
Gorai.006G229200 Gossypium raimondii HOM05D007768 ORTHO05D009831 1.7e-22 110.5 180 78.9
Dinv22750 Davidia involucrata HOM05D007768 ORTHO05D009831 1.6e-20 104.0 223 66.4
ATR0743G119 Amborella trichopoda HOM05D007768 ORTHO05D009831 3.6e-20 102.8 214 70.1
Ah.13g072810 Amaranthus hybridus HOM05D007768 ORTHO05D009831 8.0e-20 101.7 106 52.8
CiPaw.10G021200 Carya illinoinensis HOM05D007768 ORTHO05D009831 1.0e-19 101.3 235 61.3
EL10Ac3g05983 Beta vulgaris HOM05D007768 ORTHO05D009831 2.3e-19 100.1 243 65.0
Cfa015181 Carpinus fangiana HOM05D007768 ORTHO05D009831 2.3e-19 100.1 215 64.2
AUR62023860 Chenopodium quinoa HOM05D007768 ORTHO05D009831 3.0e-19 99.8 242 66.1
Haze_01481 Corylus avellana HOM05D007768 ORTHO05D009831 8.8e-19 98.2 215 63.7
Sabra02G0142500 Salix brachista HOM05D007768 ORTHO05D009831 1.2e-18 97.8 228 63.2
Lalb_Chr24g0396811 Lupinus albus HOM05D007768 ORTHO05D009831 1.5e-18 97.4 223 68.2
Ah.07g202210 Amaranthus hybridus HOM05D007768 ORTHO05D009831 2.0e-18 97.1 106 52.8
CiPaw.02G053300 Carya illinoinensis HOM05D007768 ORTHO05D009831 2.0e-18 97.1 117 50.4
CiPaw.01G098100 Carya illinoinensis HOM05D007768 ORTHO05D009831 2.6e-18 96.7 102 53.9
Rhsim09G0024900 Rhododendron simsii HOM05D007768 ORTHO05D009831 3.4e-18 96.3 226 60.6
AUR62002327 Chenopodium quinoa HOM05D007768 ORTHO05D009831 4.4e-18 95.9 105 53.3
QL10p050487 Quercus lobata HOM05D007768 ORTHO05D009831 7.5e-18 95.1 218 69.7
Ciclev10020393m.g Citrus clementina HOM05D007768 ORTHO05D009831 9.8e-18 94.7 228 68.9
Atru.chr4.1241 Acer truncatum HOM05D007768 ORTHO05D009831 2.2e-17 93.6 111 54.1
Hma1.2p1_0886F.1_g232680 Hydrangea macrophylla HOM05D007768 ORTHO05D009831 2.2e-17 93.6 224 66.1
TWI15G0176 Tripterygium wilfordii HOM05D007768 ORTHO05D009831 2.2e-17 93.6 225 65.3
Potri.017G028325 Populus trichocarpa HOM05D007768 ORTHO05D009831 3.7e-17 92.8 112 51.8
THA.LOC104803778 Tarenaya hassleriana HOM05D007768 ORTHO05D009831 3.7e-17 92.8 228 64.0
Potri.017G028600 Populus trichocarpa HOM05D007768 ORTHO05D009831 4.8e-17 92.4 103 53.4
Sabra17G0017200 Salix brachista HOM05D007768 ORTHO05D009831 4.8e-17 92.4 214 68.2
FvH4_4g10920 Fragaria vesca HOM05D007768 ORTHO05D009831 8.3e-17 91.7 224 64.7
FAN12G0864 Fragaria x ananassa HOM05D007768 ORTHO05D009831 8.3e-17 91.7 224 64.7
FAN17G2755 Fragaria x ananassa HOM05D007768 ORTHO05D009831 8.3e-17 91.7 220 64.5
Hma1.2p1_2011F.1_g311060 Hydrangea macrophylla HOM05D007768 ORTHO05D009831 8.3e-17 91.7 224 65.6
Sc07g0009860 Simmondsia chinensis HOM05D007768 ORTHO05D009831 8.3e-17 91.7 90 52.2
Potri.017G028400 Populus trichocarpa HOM05D007768 ORTHO05D009831 1.8e-16 90.5 103 52.4
Medtr2g099020 Medicago truncatula HOM05D007768 ORTHO05D009831 2.4e-16 90.1 107 47.7
TPR.G18860 Trifolium pratense HOM05D007768 ORTHO05D009831 3.1e-16 89.7 115 45.2
FAN07G2880 Fragaria x ananassa HOM05D007768 ORTHO05D009831 4.1e-16 89.4 220 64.5
Lalb_Chr14g0372491 Lupinus albus HOM05D007768 ORTHO05D009831 9.1e-16 88.2 98 49.0
CSS0025913 Camellia sinensis var. sinensis HOM05D007768 ORTHO05D009831 1.2e-15 87.8 119 46.2
Psat5g289560 Pisum sativum HOM05D007768 ORTHO05D009831 1.2e-15 87.8 109 49.5
AT3G59510 Arabidopsis thaliana HOM05D007768 ORTHO05D009831 4.5e-15 85.9 239 59.0
Lju337C6T2 Lonicera japonica HOM05D007768 ORTHO05D009831 4.5e-15 85.9 229 66.8
BcaC02g10057 Brassica carinata HOM05D007768 ORTHO05D009831 1.7e-14 84.0 103 48.5
Sp5g03650 Schrenkiella parvula HOM05D007768 ORTHO05D009831 1.7e-14 84.0 239 60.7
BcaB02g08219 Brassica carinata HOM05D007768 ORTHO05D009831 2.3e-14 83.6 97 48.5
Carub.0005s2624 Capsella rubella HOM05D007768 ORTHO05D009831 2.3e-14 83.6 227 64.3
RcHm_v2.0_Chr4g0406451 Rosa chinensis HOM05D007768 ORTHO05D009831 2.3e-14 83.6 104 48.1
THA.LOC104824141 Tarenaya hassleriana HOM05D007768 ORTHO05D009831 2.3e-14 83.6 87 52.9
A04p02150 Brassica napus HOM05D007768 ORTHO05D009831 2.9e-14 83.2 106 46.2
CARHR169890 Cardamine hirsuta HOM05D007768 ORTHO05D009831 2.9e-14 83.2 103 47.6
AL5G41420 Arabidopsis lyrata HOM05D007768 ORTHO05D009831 3.8e-14 82.8 102 48.0
BcaC08g44993 Brassica carinata HOM05D007768 ORTHO05D009831 3.8e-14 82.8 242 62.4
A07p24690 Brassica napus HOM05D007768 ORTHO05D009831 3.8e-14 82.8 242 62.4
C06p26230 Brassica napus HOM05D007768 ORTHO05D009831 3.8e-14 82.8 242 62.8
BolC6t37786H Brassica oleracea HOM05D007768 ORTHO05D009831 3.8e-14 82.8 242 62.8
BraA07t30114Z Brassica rapa HOM05D007768 ORTHO05D009831 3.8e-14 82.8 242 62.4
C04p33400 Brassica napus HOM05D007768 ORTHO05D009831 5.0e-14 82.4 103 47.6
BolC4t24901H Brassica oleracea HOM05D007768 ORTHO05D009831 5.0e-14 82.4 103 47.6
CSS0032062 Camellia sinensis var. sinensis HOM05D007768 ORTHO05D009831 5.0e-14 82.4 119 44.5
THA.LOC104802311 Tarenaya hassleriana HOM05D007768 ORTHO05D009831 2.5e-13 80.1 98 46.9
Rhsim02G0081500 Rhododendron simsii HOM05D000578 ORTHO05D000422 3.2e-13 79.7 91 52.7
BraA04t15942Z Brassica rapa HOM05D007768 ORTHO05D009831 4.2e-13 79.3 103 45.6
VMungo1080G0762 Vigna mungo HOM05D006244 ORTHO05D007401 4.2e-13 79.3 90 46.7
Glyma.15G029600 Glycine max HOM05D007768 ORTHO05D009831 7.2e-13 78.6 59 61.0
Cc04_g10990 Coffea canephora HOM05D007768 ORTHO05D009831 9.5e-13 78.2 107 43.0
BcaB02g07459 Brassica carinata HOM05D007768 ORTHO05D009831 1.2e-12 77.8 107 45.8
PGSC0003DMG400007033 Solanum tuberosum HOM05D007768 ORTHO05D009831 1.2e-12 77.8 115 45.2
Gohir.A10G138600 Gossypium hirsutum HOM05D007768 ORTHO05D009831 1.6e-12 77.4 53 67.9
Gohir.D10G128200 Gossypium hirsutum HOM05D007768 ORTHO05D009831 1.6e-12 77.4 57 64.9
Gorai.011G141400 Gossypium raimondii HOM05D007768 ORTHO05D009831 1.6e-12 77.4 57 64.9
Nitab4.5_0006622g0010 Nicotiana tabacum HOM05D007768 ORTHO05D009831 2.1e-12 77.0 104 48.1
Solyc05g050700.1 Solanum lycopersicum HOM05D007768 ORTHO05D009831 2.1e-12 77.0 112 41.1
Thhalv10006500m.g Eutrema salsugineum HOM05D007768 ORTHO05D009831 3.6e-12 76.3 104 47.1
Sopen05g029110 Solanum pennellii HOM05D007768 ORTHO05D009831 4.7e-12 75.9 112 40.2
CAN.G112.12 Capsicum annuum HOM05D007768 ORTHO05D009831 6.1e-12 75.5 106 44.3
Nitab4.5_0011755g0020 Nicotiana tabacum HOM05D007768 ORTHO05D009831 8.0e-12 75.1 59 64.4
Cc04_g11030 Coffea canephora HOM05D007768 ORTHO05D009831 1.0e-11 74.7 108 41.7
DCAR_016491 Daucus carota HOM05D007768 ORTHO05D009831 3.0e-11 73.2 99 39.4
Cfa015066 Carpinus fangiana HOM05D007768 ORTHO05D009831 8.8e-11 71.6 51 64.7
Peaxi162Scf01052g00315 Petunia axillaris HOM05D007768 ORTHO05D009831 5.7e-10 68.9 102 43.1
Sc25g0002590 Simmondsia chinensis HOM05D007768 ORTHO05D009831 2.4e-08 63.5 103 39.8
Prupe.1G197000 Prunus persica HOM05D007768 ORTHO05D009831 1.6e-07 60.8 41 68.3
Aa31LG10G13830 Aethionema arabicum HOM05D007768 ORTHO05D009831 2.3e-06 57.0 158 70.3
GSVIVG01003169001 Vitis vinifera HOM05D007150 ORTHO05D008994 5.0e-06 55.8 106 37.7
SEGI_19656 Sequoiadendron giganteum HOM05D004495 ORTHO05D005361 8.6e-06 55.1 87 39.1


User provided reference genes

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