Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib151G0911 Durio zibethinus HOM05D006775 ORTHO05D008344 1.3e-131 473.0 230 100.0
Thecc.04G277900 Theobroma cacao HOM05D006775 ORTHO05D008344 2.5e-103 379.0 227 79.7
COL.COLO4_13925 Corchorus olitorius HOM05D006775 ORTHO05D008344 4.8e-102 374.8 229 78.6
Gohir.D10G166800 Gossypium hirsutum HOM05D006775 ORTHO05D008344 1.5e-95 353.2 228 74.1
Gorai.011G186100 Gossypium raimondii HOM05D006775 ORTHO05D008344 1.8e-93 346.3 228 73.7
Gohir.A09G233400 Gossypium hirsutum HOM05D006775 ORTHO05D008344 1.9e-90 336.3 230 71.7
Gohir.D09G234500 Gossypium hirsutum HOM05D006775 ORTHO05D008344 1.4e-88 330.1 230 70.0
Gorai.006G257400 Gossypium raimondii HOM05D006775 ORTHO05D008344 5.2e-88 328.2 230 69.6
Cfa015346 Carpinus fangiana HOM05D006775 ORTHO05D008344 6.3e-86 321.2 238 69.3
Manes.15G016600 Manihot esculenta HOM05D006775 ORTHO05D008344 5.5e-82 308.1 223 68.6
QL06p007489 Quercus lobata HOM05D006775 ORTHO05D008344 1.6e-81 306.6 238 64.7
Cpa.g.sc1008.3 Carica papaya HOM05D006775 ORTHO05D008344 2.7e-81 305.8 238 63.0
Atru.chr4.2756 Acer truncatum HOM05D006775 ORTHO05D008344 3.0e-80 302.4 231 63.6
Actinidia40225 Actinidia chinensis HOM05D006775 ORTHO05D008344 1.2e-79 300.4 231 61.9
Ciclev10006777m.g Citrus clementina HOM05D000611 ORTHO05D000809 9.7e-79 297.4 222 65.8
SalBow2G3406 Salvia bowleyana HOM05D006775 ORTHO05D008344 1.7e-78 296.6 236 61.9
SGA_v2.0_scaffold57G20240 Striga asiatica HOM05D006775 ORTHO05D008344 2.8e-78 295.8 227 62.1
TWI09G0159 Tripterygium wilfordii HOM05D006775 ORTHO05D008344 4.8e-78 295.0 225 63.6
TWI09G0706 Tripterygium wilfordii HOM05D006775 ORTHO05D008344 8.2e-78 294.3 222 64.0
GSVIVG01017799001 Vitis vinifera HOM05D000611 ORTHO05D000809 1.8e-77 293.1 235 63.0
Potri.008G204800 Populus trichocarpa HOM05D006775 ORTHO05D008344 1.6e-76 290.0 230 61.7
DCAR_002444 Daucus carota HOM05D006775 ORTHO05D008344 5.9e-76 288.1 243 58.0
Duzib052G0853 Durio zibethinus HOM05D006775 ORTHO05D008344 1.0e-75 287.3 226 67.3
Eucgr.H03770 Eucalyptus grandis HOM05D006775 ORTHO05D008344 1.0e-75 287.3 234 60.7
Glyma.07G251400 Glycine max HOM05D006775 ORTHO05D008344 5.0e-75 285.0 224 61.6
Hma1.2p1_0823F.1_g224630 Hydrangea macrophylla HOM05D006775 ORTHO05D008344 1.5e-74 283.5 217 62.7
CiPaw.02G086400 Carya illinoinensis HOM05D006775 ORTHO05D008344 5.5e-74 281.6 237 61.2
Sabra08G0157200 Salix brachista HOM05D006775 ORTHO05D008344 1.6e-73 280.0 220 62.3
Glyma.17G022900 Glycine max HOM05D006775 ORTHO05D008344 2.7e-73 279.3 235 58.7
Sc25g0004760 Simmondsia chinensis HOM05D006775 ORTHO05D008344 6.1e-73 278.1 230 59.6
VMungo1215G1959 Vigna mungo HOM05D006775 ORTHO05D008344 6.1e-73 278.1 227 60.8
Gohir.D10G153500 Gossypium hirsutum HOM05D006775 ORTHO05D008344 2.3e-72 276.2 229 62.0
MD00G1092600 Malus domestica HOM05D006775 ORTHO05D008344 2.3e-72 276.2 226 59.7
Phvul.003G101000 Phaseolus vulgaris HOM05D006775 ORTHO05D008344 3.0e-72 275.8 227 59.5
MSTRG.10056 Avicennia marina HOM05D006775 ORTHO05D008344 5.2e-72 275.0 241 58.5
PGR004G1240 Punica granatum HOM05D006775 ORTHO05D008344 5.2e-72 275.0 251 55.4
Lj3A812T71 Lonicera japonica HOM05D006775 ORTHO05D008344 6.8e-72 274.6 241 56.8
Migut.G00207 Erythranthe guttata HOM05D006775 ORTHO05D008344 1.5e-71 273.5 230 55.7
Nitab4.5_0005595g0020 Nicotiana tabacum HOM05D006775 ORTHO05D008344 1.5e-71 273.5 224 58.9
Nn3g21322 Nelumbo nucifera HOM05D006775 ORTHO05D008344 1.7e-70 270.0 244 56.6
PGSC0003DMG400022660 Solanum tuberosum HOM05D006775 ORTHO05D008344 1.7e-70 270.0 229 58.5
MELO3C006607.2 Cucumis melo HOM05D006775 ORTHO05D008344 2.8e-70 269.2 224 57.1
Aqoxy5G01958 Aquilegia oxysepala HOM05D006775 ORTHO05D008344 3.7e-70 268.9 242 55.8
Sed0012602 Sechium edule HOM05D006775 ORTHO05D008344 4.8e-70 268.5 228 57.0
ECA240G4404 Erigeron canadensis HOM05D006775 ORTHO05D008344 1.1e-69 267.3 233 56.2
TAR633G2345 Trochodendron aralioides HOM05D001386 ORTHO05D003791 1.1e-69 267.3 220 60.9
MBI18_g12413_MAGBIO Magnolia biondii HOM05D006775 ORTHO05D008344 1.8e-69 266.5 233 56.7
HanXRQChr03g0079491 Helianthus annuus HOM05D006775 ORTHO05D008344 2.4e-69 266.2 240 55.0
arahy.Tifrunner.gnm1.ann1.HV9WHL Arachis hypogaea HOM05D006775 ORTHO05D008344 5.4e-69 265.0 231 58.0
Solyc01g067280.3 Solanum lycopersicum HOM05D006775 ORTHO05D008344 7.0e-69 264.6 229 57.2
CsaV3_3G014150 Cucumis sativus L. HOM05D006775 ORTHO05D008344 9.1e-69 264.2 222 56.8
arahy.Tifrunner.gnm1.ann1.UNR197 Arachis hypogaea HOM05D006775 ORTHO05D008344 2.7e-68 262.7 237 56.5
Gohir.A10G101330 Gossypium hirsutum HOM05D006775 ORTHO05D008344 4.5e-68 261.9 227 59.9
ClCG05G005800 Citrullus lanatus HOM05D006775 ORTHO05D008344 1.3e-67 260.4 221 56.1
Cc03_g02340 Coffea canephora HOM05D006775 ORTHO05D008344 1.3e-67 260.4 241 53.5
Sopen01g029070 Solanum pennellii HOM05D006775 ORTHO05D008344 1.3e-67 260.4 229 56.3
Lsat_1_v5_gn_5_50761 Lactuca sativa HOM05D006775 ORTHO05D008344 2.9e-67 259.2 234 54.7
Nitab4.5_0003256g0010 Nicotiana tabacum HOM05D006775 ORTHO05D008344 2.9e-67 259.2 218 59.6
Lalb_Chr13g0303871 Lupinus albus HOM05D006775 ORTHO05D008344 1.9e-66 256.5 220 58.2
Medtr4g118790 Medicago truncatula HOM05D006775 ORTHO05D008344 1.9e-66 256.5 226 54.9
vmacro08201 Vaccinium macrocarpon HOM05D006775 ORTHO05D008344 5.5e-66 255.0 215 57.2
Lj4g0016853 Lotus japonicus HOM05D006775 ORTHO05D008344 7.2e-66 254.6 230 56.1
TPR.G14956 Trifolium pratense HOM05D006775 ORTHO05D008344 1.4e-64 250.4 219 55.3
AUR62042989 Chenopodium quinoa HOM05D006775 ORTHO05D008344 5.7e-63 245.0 222 55.0
PSO832G0266 Papaver somniferum HOM05D006775 ORTHO05D008344 1.7e-62 243.4 240 52.1
Nn4g25991 Nelumbo nucifera HOM05D006775 ORTHO05D008344 4.9e-62 241.9 220 54.5
Peaxi162Scf00386g00010 Petunia axillaris HOM05D006775 ORTHO05D008344 6.3e-62 241.5 237 52.3
Psat4g030400 Pisum sativum HOM05D006775 ORTHO05D008344 8.3e-62 241.1 226 51.3
Psat4g030480 Pisum sativum HOM05D006775 ORTHO05D008344 1.4e-61 240.4 226 51.3
unitig_32.g10786 Utricularia gibba HOM05D006775 ORTHO05D008344 1.7e-59 233.4 207 55.6
EL10Ac3g06567 Beta vulgaris HOM05D006775 ORTHO05D008344 2.3e-59 233.0 225 54.2
RcHm_v2.0_Chr6g0302841 Rosa chinensis HOM05D006775 ORTHO05D008344 5.0e-59 231.9 230 50.9
CANSAT78G0382 Cannabis sativa HOM05D006775 ORTHO05D008344 4.3e-58 228.8 236 52.5
HPP92_025211 Vanilla planifolia HOM05D006775 ORTHO05D008344 5.6e-58 228.4 249 47.0
HPP92_025229 Vanilla planifolia HOM05D006775 ORTHO05D008344 1.2e-57 227.3 249 47.0
TWI09G0165 Tripterygium wilfordii HOM05D006775 ORTHO05D008344 1.6e-57 226.9 181 61.3
ATR0706G197 Amborella trichopoda HOM05D006775 ORTHO05D008344 2.1e-57 226.5 228 49.6
Aa31LG9G1860 Aethionema arabicum HOM05D006775 ORTHO05D008344 3.6e-57 225.7 232 49.6
Ah.13g074540 Amaranthus hybridus HOM05D006196 ORTHO05D007758 1.0e-56 224.2 214 54.2
BolC1t02676H Brassica oleracea HOM05D006775 ORTHO05D008344 3.1e-56 222.6 231 50.2
Ca_21549_v3 Cicer arietinum L. HOM05D006775 ORTHO05D008344 6.8e-56 221.5 219 49.3
C01p27330 Brassica napus HOM05D006775 ORTHO05D008344 8.9e-56 221.1 231 49.8
THA.LOC104820238 Tarenaya hassleriana HOM05D006775 ORTHO05D008344 8.9e-56 221.1 231 47.2
A01p21970 Brassica napus HOM05D006775 ORTHO05D008344 2.0e-55 219.9 231 49.8
BraA01t02103Z Brassica rapa HOM05D006775 ORTHO05D008344 2.0e-55 219.9 231 49.8
BcaC09g50254 Brassica carinata HOM05D001154 ORTHO05D001175 9.8e-55 217.6 227 49.8
Carub.0007s2625 Capsella rubella HOM05D006775 ORTHO05D008344 9.8e-55 217.6 231 48.1
Sp7g13860 Schrenkiella parvula HOM05D006775 ORTHO05D008344 2.2e-54 216.5 231 48.9
BcaNung00261 Brassica carinata HOM05D006775 ORTHO05D008344 5.4e-53 211.8 232 47.0
CARHR289990 Cardamine hirsuta HOM05D006775 ORTHO05D008344 2.0e-52 209.9 236 45.3
Haze_01265 Corylus avellana HOM05D006775 ORTHO05D008344 8.6e-51 204.5 168 64.3
Prupe.1G365500 Prunus persica HOM05D006775 ORTHO05D008344 7.3e-50 201.4 158 61.4
Zm00001eb285420 Zea mays HOM05D006775 ORTHO05D008344 1.2e-47 194.1 225 42.2
Os05g0372800 Oryza sativa ssp. japonica HOM05D006775 ORTHO05D008344 1.5e-47 193.7 228 39.9
FvH4_2g38460 Fragaria vesca HOM05D006775 ORTHO05D008344 2.0e-47 193.4 308 36.7
Oeu062887.1 Olea europaea HOM05D006775 ORTHO05D008344 9.8e-47 191.0 142 64.8
FAN20G0357 Fragaria x ananassa HOM05D006775 ORTHO05D008344 6.4e-46 188.3 297 37.4
Dinv38323 Davidia involucrata HOM05D006775 ORTHO05D008344 1.6e-44 183.7 167 55.1
Rhsim04G0216500 Rhododendron simsii HOM05D006775 ORTHO05D008344 4.6e-44 182.2 220 45.0
HPP92_025275 Vanilla planifolia HOM05D006775 ORTHO05D008344 9.9e-39 164.5 156 51.3
CDE08G1672 Ceratophyllum demersum HOM05D006775 ORTHO05D008344 2.2e-38 163.3 236 39.8
Duzib212G0132 Durio zibethinus HOM05D006775 ORTHO05D008344 4.1e-37 159.1 102 73.5
AagrBONN_evm.TU.Sc2ySwM_362.2565 Anthoceros agrestis HOM05D006775 ORTHO05D008344 2.1e-36 156.8 230 35.2
Pp3c2_550 Physcomitrium patens HOM05D006775 ORTHO05D008344 3.5e-36 156.0 253 34.4
AL7G39920 Arabidopsis lyrata HOM05D006775 ORTHO05D008344 1.2e-31 141.0 149 48.3
AT4G15563 Arabidopsis thaliana HOM05D006775 ORTHO05D008344 2.0e-31 140.2 149 48.3
Eucgr.A01819 Eucalyptus grandis HOM05D006775 ORTHO05D008344 1.1e-29 134.4 87 71.3
Gorai.011G171400 Gossypium raimondii HOM05D006775 ORTHO05D008344 1.1e-29 134.4 113 61.9
Thhalv10026419m.g Eutrema salsugineum HOM05D006775 ORTHO05D008344 4.2e-29 132.5 149 45.6
SMO340G0127 Selaginella moellendorffii HOM05D006775 ORTHO05D008344 1.6e-28 130.6 141 46.1
CSS0032456 Camellia sinensis var. sinensis HOM05D006775 ORTHO05D008344 1.2e-23 114.4 74 70.3
Zm00001eb351020 Zea mays HOM05D006775 ORTHO05D008344 1.9e-21 107.1 143 40.6
CSS0028683 Camellia sinensis var. sinensis HOM05D006775 ORTHO05D008344 6.6e-19 98.6 84 56.0
Haze_01266 Corylus avellana HOM05D006775 ORTHO05D008344 1.1e-18 97.8 59 74.6
MD09G1114900 Malus domestica HOM05D006775 ORTHO05D008344 4.3e-18 95.9 79 57.0
Oeu052260.1 Olea europaea HOM05D006775 ORTHO05D008344 4.3e-18 95.9 134 46.3
Rhsim12G0090200 Rhododendron simsii HOM05D006775 ORTHO05D008344 4.3e-18 95.9 67 61.2
Aqoxy5G00644 Aquilegia oxysepala HOM05D006775 ORTHO05D008344 7.3e-18 95.1 72 56.9
CBR_g21749 Chara braunii HOM05D006775 ORTHO05D008344 3.1e-16 89.7 157 33.8
Actinidia23427 Actinidia chinensis HOM05D006775 ORTHO05D008344 4.0e-16 89.4 63 65.1
PSO210G2970 Papaver somniferum HOM05D006775 ORTHO05D008344 2.9e-14 83.2 105 41.9


User provided reference genes

Program Settings