Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib151G0876 Durio zibethinus HOM05D007303 ORTHO05D009231 1.5e-32 142.1 67 100.0
Thecc.04G147800 Theobroma cacao HOM05D007303 ORTHO05D009231 6.4e-31 136.7 67 94.0
COL.COLO4_05680 Corchorus olitorius HOM05D007303 ORTHO05D009231 2.4e-30 134.8 67 92.5
Gohir.A10G152200 Gossypium hirsutum HOM05D007303 ORTHO05D009231 4.6e-29 130.6 63 92.1
Gohir.A10G152700 Gossypium hirsutum HOM05D007303 ORTHO05D009231 4.6e-29 130.6 63 92.1
Gohir.D10G113500 Gossypium hirsutum HOM05D007303 ORTHO05D009231 4.6e-29 130.6 63 92.1
Gohir.D10G114000 Gossypium hirsutum HOM05D007303 ORTHO05D009231 4.6e-29 130.6 63 92.1
Gorai.011G125300 Gossypium raimondii HOM05D007303 ORTHO05D009231 4.6e-29 130.6 63 92.1
Gorai.011G125800 Gossypium raimondii HOM05D007303 ORTHO05D009231 4.6e-29 130.6 63 92.1
Manes.09G121600 Manihot esculenta HOM05D007303 ORTHO05D009231 7.8e-29 129.8 67 88.1
CiPaw.10G166700 Carya illinoinensis HOM05D007303 ORTHO05D009231 1.7e-28 128.6 67 86.6
TWI53G0471 Tripterygium wilfordii HOM05D007303 ORTHO05D009231 1.7e-28 128.6 64 89.1
Cpa.g.sc0.70 Carica papaya HOM05D007303 ORTHO05D009231 2.3e-28 128.3 65 87.7
Duzib212G0558 Durio zibethinus HOM05D007303 ORTHO05D009231 3.9e-28 127.5 67 89.6
CsaV3_4G027390 Cucumis sativus L. HOM05D007303 ORTHO05D009231 5.1e-28 127.1 65 90.8
MELO3C025258.2 Cucumis melo HOM05D007303 ORTHO05D009231 1.5e-27 125.6 65 89.2
Cfa017000 Carpinus fangiana HOM05D007303 ORTHO05D009231 2.5e-27 124.8 63 87.3
ClCG04G006170 Citrullus lanatus HOM05D007303 ORTHO05D009231 2.5e-27 124.8 67 85.1
GSVIVG01010904001 Vitis vinifera HOM05D007303 ORTHO05D009231 2.5e-27 124.8 67 83.6
Sed0004919 Sechium edule HOM05D007303 ORTHO05D009231 4.3e-27 124.0 67 82.1
TWI74G1491 Tripterygium wilfordii HOM05D007303 ORTHO05D009231 4.3e-27 124.0 65 86.2
Haze_21228 Corylus avellana HOM05D007303 ORTHO05D009231 5.6e-27 123.6 63 87.3
Prupe.6G297800 Prunus persica HOM05D007303 ORTHO05D009231 2.8e-26 121.3 67 83.6
Sc20g0007240 Simmondsia chinensis HOM05D007303 ORTHO05D009231 2.8e-26 121.3 67 82.1
Hund19736 Selenicereus undatus HOM05D007303 ORTHO05D009231 6.2e-26 120.2 62 87.1
Eucgr.K01299 Eucalyptus grandis HOM05D007303 ORTHO05D009231 8.1e-26 119.8 67 82.1
CANSAT83G0001 Cannabis sativa HOM05D007303 ORTHO05D009231 1.4e-25 119.0 65 83.1
Ca_23107_v3 Cicer arietinum L. HOM05D007303 ORTHO05D009231 2.4e-25 118.2 65 84.6
THA.LOC104820511 Tarenaya hassleriana HOM05D007303 ORTHO05D009231 2.4e-25 118.2 61 85.2
Aa31LG5G18650 Aethionema arabicum HOM05D007303 ORTHO05D009231 3.1e-25 117.9 65 76.9
RcHm_v2.0_Chr3g0459881 Rosa chinensis HOM05D007303 ORTHO05D009231 3.1e-25 117.9 66 80.3
C05p59250 Brassica napus HOM05D007303 ORTHO05D009231 5.3e-25 117.1 65 80.0
BolC5t34572H Brassica oleracea HOM05D007303 ORTHO05D009231 5.3e-25 117.1 65 80.0
PGR031G1377 Punica granatum HOM05D007303 ORTHO05D009231 5.3e-25 117.1 65 83.1
Migut.L02050 Erythranthe guttata HOM05D007303 ORTHO05D009231 9.0e-25 116.3 64 82.8
Ah.15g089810 Amaranthus hybridus HOM05D007303 ORTHO05D009231 1.2e-24 115.9 66 78.8
BcaB04g18583 Brassica carinata HOM05D007303 ORTHO05D009231 1.2e-24 115.9 65 78.5
BcaC05g29598 Brassica carinata HOM05D007303 ORTHO05D009231 1.2e-24 115.9 65 78.5
A05p40170 Brassica napus HOM05D007303 ORTHO05D009231 1.2e-24 115.9 65 78.5
Thhalv10021979m.g Eutrema salsugineum HOM05D007303 ORTHO05D009231 1.2e-24 115.9 65 78.5
FAN05G5278 Fragaria x ananassa HOM05D007303 ORTHO05D009231 1.2e-24 115.9 66 78.8
FAN09G2915 Fragaria x ananassa HOM05D007303 ORTHO05D009231 1.2e-24 115.9 66 78.8
Oeu026929.1 Olea europaea HOM05D007303 ORTHO05D009231 1.2e-24 115.9 66 80.3
MD12G1193500 Malus domestica HOM05D007303 ORTHO05D009231 1.5e-24 115.5 67 80.6
AUR62006451 Chenopodium quinoa HOM05D007303 ORTHO05D009231 2.0e-24 115.2 67 76.1
Hma1.2p1_0174F.1_g076630 Hydrangea macrophylla HOM05D007303 ORTHO05D009231 2.0e-24 115.2 63 81.0
BcaC09g47979 Brassica carinata HOM05D007303 ORTHO05D009231 2.6e-24 114.8 65 76.9
BolC1t05499H Brassica oleracea HOM05D007303 ORTHO05D009231 2.6e-24 114.8 65 76.9
BraA01t04340Z Brassica rapa HOM05D007303 ORTHO05D009231 2.6e-24 114.8 65 76.9
FvH4_6g09420 Fragaria vesca HOM05D007303 ORTHO05D009231 2.6e-24 114.8 66 77.3
FAN14G3833 Fragaria x ananassa HOM05D007303 ORTHO05D009231 2.6e-24 114.8 65 78.5
THA.LOC104816152 Tarenaya hassleriana HOM05D007303 ORTHO05D009231 2.6e-24 114.8 61 83.6
BraA03t12812Z Brassica rapa HOM05D007303 ORTHO05D009231 3.4e-24 114.4 65 76.9
MD04G1177900 Malus domestica HOM05D007303 ORTHO05D009231 3.4e-24 114.4 62 83.9
Aa31LG5G11350 Aethionema arabicum HOM05D007303 ORTHO05D009231 4.5e-24 114.0 65 75.4
AT3G08610 Arabidopsis thaliana HOM05D007303 ORTHO05D009231 4.5e-24 114.0 65 76.9
BcaC01g04187 Brassica carinata HOM05D007303 ORTHO05D009231 4.5e-24 114.0 65 76.9
BolC3t16676H Brassica oleracea HOM05D007303 ORTHO05D009231 4.5e-24 114.0 65 76.9
TAR633G2342 Trochodendron aralioides HOM05D007303 ORTHO05D009231 4.5e-24 114.0 59 88.1
AL3G19590 Arabidopsis lyrata HOM05D007303 ORTHO05D009231 5.8e-24 113.6 65 76.9
BcaB04g21249 Brassica carinata HOM05D007303 ORTHO05D009231 5.8e-24 113.6 67 74.6
Glyma.18G217700 Glycine max HOM05D007303 ORTHO05D009231 7.6e-24 113.2 60 83.3
Glyma.09G271600 Glycine max HOM05D007303 ORTHO05D009231 9.9e-24 112.8 60 83.3
Medtr8g005360 Medicago truncatula HOM05D007303 ORTHO05D009231 9.9e-24 112.8 67 82.1
Sopen10g027350 Solanum pennellii HOM05D007303 ORTHO05D009231 9.9e-24 112.8 66 77.3
PGSC0003DMG400027701 Solanum tuberosum HOM05D007303 ORTHO05D009231 9.9e-24 112.8 66 77.3
CAN.G65.102 Capsicum annuum HOM05D007303 ORTHO05D009231 1.3e-23 112.5 66 74.2
CARHR082910 Cardamine hirsuta HOM05D007303 ORTHO05D009231 1.3e-23 112.5 65 75.4
Nitab4.5_0001215g0100 Nicotiana tabacum HOM05D007303 ORTHO05D009231 1.3e-23 112.5 66 77.3
Oeu007820.2 Olea europaea HOM05D007303 ORTHO05D009231 2.2e-23 111.7 64 79.7
Cc06_g00200 Coffea canephora HOM05D007303 ORTHO05D009231 3.8e-23 110.9 65 78.5
Oeu035181.1 Olea europaea HOM05D007303 ORTHO05D009231 4.9e-23 110.5 63 79.4
Phvul.008G079100 Phaseolus vulgaris HOM05D007303 ORTHO05D009231 4.9e-23 110.5 67 80.6
Carub.0003s0774 Capsella rubella HOM05D007303 ORTHO05D009231 8.4e-23 109.8 65 72.3
Psat6g005160 Pisum sativum HOM05D007303 ORTHO05D009231 1.1e-22 109.4 61 82.0
SalBow4G1964 Salvia bowleyana HOM05D007303 ORTHO05D009231 1.4e-22 109.0 65 78.5
SalBow4G2888 Salvia bowleyana HOM05D007303 ORTHO05D009231 1.4e-22 109.0 65 78.5
DCAR_023961 Daucus carota HOM05D007303 ORTHO05D009231 1.9e-22 108.6 55 87.3
arahy.Tifrunner.gnm1.ann1.RL3GXR Arachis hypogaea HOM05D007303 ORTHO05D009231 2.4e-22 108.2 61 80.3
arahy.Tifrunner.gnm1.ann1.ZQ7RI8 Arachis hypogaea HOM05D007303 ORTHO05D009231 2.4e-22 108.2 61 80.3
Sp3g07060 Schrenkiella parvula HOM05D007303 ORTHO05D009231 2.4e-22 108.2 55 85.5
PSO384G4262 Papaver somniferum HOM05D007303 ORTHO05D009231 1.6e-21 105.5 58 81.0
Lj3g0023771 Lotus japonicus HOM05D007303 ORTHO05D009231 3.5e-21 104.4 64 76.6
Lsat_1_v5_gn_8_109701 Lactuca sativa HOM05D007303 ORTHO05D009231 4.6e-21 104.0 63 73.0
Potri.016G140900 Populus trichocarpa HOM05D007303 ORTHO05D009231 6.0e-21 103.6 63 71.4
Os05g0481600 Oryza sativa ssp. japonica HOM05D007303 ORTHO05D009231 1.8e-20 102.1 61 73.8
QL07p031324 Quercus lobata HOM05D007303 ORTHO05D009231 6.7e-20 100.1 66 63.6
ECA236G3381 Erigeron canadensis HOM05D007303 ORTHO05D009231 1.5e-19 99.0 61 77.0
CiPaw.01G273900 Carya illinoinensis HOM05D007303 ORTHO05D009231 4.8e-18 94.0 60 73.3
Oeu028466.1 Olea europaea HOM05D007303 ORTHO05D009231 6.2e-18 93.6 63 68.3
SEGI_21984 Sequoiadendron giganteum HOM05D007303 ORTHO05D009231 2.4e-17 91.7 66 63.6
Cc09_g07100 Coffea canephora HOM05D007303 ORTHO05D009231 3.1e-17 91.3 65 66.2
Cc00_g04100 Coffea canephora HOM05D007303 ORTHO05D009231 1.2e-16 89.4 65 66.2
Manes.08G168000 Manihot esculenta HOM05D007303 ORTHO05D009231 1.7e-15 85.5 48 81.2
Sabra04G0157400 Salix brachista HOM05D007303 ORTHO05D009231 1.2e-13 79.3 47 74.5
MBI15_g31036_MAGBIO Magnolia biondii HOM05D007303 ORTHO05D009231 1.5e-11 72.4 39 84.6
A03p36440 Brassica napus HOM05D007303 ORTHO05D009231 4.3e-11 70.9 36 83.3
Mapoly0148s0030 Marchantia polymorpha HOM05D007303 ORTHO05D009231 5.6e-11 70.5 60 53.3
CSS0019093 Camellia sinensis var. sinensis HOM05D007303 ORTHO05D009231 6.2e-10 67.0 32 90.6
CSS0017493 Camellia sinensis var. sinensis HOM05D007303 ORTHO05D009231 8.2e-10 66.6 32 90.6
CSS0048723 Camellia sinensis var. sinensis HOM05D007303 ORTHO05D009231 8.2e-10 66.6 32 90.6
Pp3c10_5690 Physcomitrium patens HOM05D007303 ORTHO05D009231 3.1e-09 64.7 58 50.0
Pp3c10_5720 Physcomitrium patens HOM05D007303 ORTHO05D009231 3.1e-09 64.7 58 50.0
Zm00001eb290920 Zea mays HOM05D007303 ORTHO05D009231 3.1e-09 64.7 36 75.0
Cc07_g13470 Coffea canephora HOM05D007303 ORTHO05D009231 9.0e-09 63.2 43 62.8
CBR_g5630 Chara braunii HOM05D007303 ORTHO05D009231 2.0e-08 62.0 53 52.8


User provided reference genes

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