Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib151G0774 Durio zibethinus HOM05D008627 ORTHO05D010841 6.8e-96 354.0 179 100.0
COL.COLO4_20905 Corchorus olitorius HOM05D008627 ORTHO05D010841 3.6e-73 278.5 179 79.9
Gohir.D10G133100 Gossypium hirsutum HOM05D008627 ORTHO05D010841 2.3e-59 232.6 179 68.7
Gorai.011G146800 Gossypium raimondii HOM05D008627 ORTHO05D010841 3.3e-58 228.8 180 68.3
Gohir.A10G133600 Gossypium hirsutum HOM05D008627 ORTHO05D010841 1.3e-57 226.9 179 67.0
Thecc.04G186000 Theobroma cacao HOM05D008627 ORTHO05D010841 3.7e-57 225.3 152 77.0
Ciclev10032846m.g Citrus clementina HOM05D008627 ORTHO05D010841 1.2e-55 220.3 131 79.4
TWI74G0088 Tripterygium wilfordii HOM05D008627 ORTHO05D010841 1.5e-55 219.9 140 80.0
TWI77G0869 Tripterygium wilfordii HOM05D008627 ORTHO05D010841 2.6e-55 219.2 179 65.4
FAN12G2769 Fragaria x ananassa HOM05D008627 ORTHO05D010841 1.0e-54 217.2 173 65.3
FvH4_4g36570 Fragaria vesca HOM05D008627 ORTHO05D010841 2.9e-54 215.7 173 65.9
FAN17G1667 Fragaria x ananassa HOM05D008627 ORTHO05D010841 6.5e-54 214.5 173 65.9
FAN07G2611 Fragaria x ananassa HOM05D008627 ORTHO05D010841 8.4e-54 214.2 173 65.9
RcHm_v2.0_Chr4g0446331 Rosa chinensis HOM05D008627 ORTHO05D010841 1.1e-53 213.8 173 65.3
Potri.010G096600 Populus trichocarpa HOM05D008627 ORTHO05D010841 4.2e-53 211.8 125 82.4
Potri.008G145500 Populus trichocarpa HOM05D008627 ORTHO05D010841 5.5e-53 211.5 122 84.4
Cpa.g.sc953.2 Carica papaya HOM05D008627 ORTHO05D010841 7.9e-52 207.6 135 75.6
Sabra10G0069200 Salix brachista HOM05D008627 ORTHO05D010841 1.3e-51 206.8 121 83.5
Prupe.1G344200 Prunus persica HOM05D008627 ORTHO05D010841 1.1e-50 203.8 186 61.8
AUR62007022 Chenopodium quinoa HOM05D008627 ORTHO05D010841 3.3e-50 202.2 133 73.7
AUR62017639 Chenopodium quinoa HOM05D008627 ORTHO05D010841 9.7e-50 200.7 131 74.8
HanXRQChr06g0175551 Helianthus annuus HOM05D008627 ORTHO05D010841 1.3e-49 200.3 130 76.9
EL10Ac9g22891 Beta vulgaris HOM05D008627 ORTHO05D010841 2.8e-49 199.1 133 75.9
Lsat_1_v5_gn_0_9181 Lactuca sativa HOM05D008627 ORTHO05D010841 1.1e-48 197.2 131 74.8
ECA246G0765 Erigeron canadensis HOM05D008627 ORTHO05D010841 4.1e-48 195.3 134 72.4
FAN22G1733 Fragaria x ananassa HOM05D008627 ORTHO05D010841 1.5e-47 193.4 206 54.4
MD16G1006400 Malus domestica HOM05D008627 ORTHO05D010841 5.0e-46 188.3 180 59.4
Duzib151G0313 Durio zibethinus HOM05D008627 ORTHO05D010841 3.6e-44 182.2 115 81.7
MBI03_g05119_MAGBIO Magnolia biondii HOM05D008627 ORTHO05D010841 3.3e-42 175.6 126 70.6
HPP92_002493 Vanilla planifolia HOM05D008627 ORTHO05D010841 1.7e-41 173.3 128 65.6
ATR0618G186 Amborella trichopoda HOM05D008627 ORTHO05D010841 4.1e-40 168.7 133 66.2
CDE05G3193 Ceratophyllum demersum HOM05D008627 ORTHO05D010841 1.3e-38 163.7 119 65.5
AUR62012873 Chenopodium quinoa HOM05D008627 ORTHO05D010841 7.9e-36 154.5 106 72.6
PSO017G6499 Papaver somniferum HOM05D008627 ORTHO05D010841 8.8e-35 151.0 127 58.3
PSO478G2256 Papaver somniferum HOM05D008627 ORTHO05D010841 2.6e-34 149.4 120 60.0
CBR_g23395 Chara braunii HOM05D008627 ORTHO05D010841 2.9e-30 136.0 129 54.3
Pp3c5_20280 Physcomitrium patens HOM05D008627 ORTHO05D010841 7.4e-26 121.3 130 51.5
CDE05G0278 Ceratophyllum demersum HOM05D008627 ORTHO05D010841 1.0e-22 110.9 73 71.2
Prupe.7G051000 Prunus persica HOM05D008627 ORTHO05D010841 6.8e-19 98.2 75 64.0
Prupe.1G083400 Prunus persica HOM05D008627 ORTHO05D010841 2.0e-18 96.7 69 69.6
Prupe.1G114900 Prunus persica HOM05D008627 ORTHO05D010841 2.0e-18 96.7 69 69.6
Hund24318 Selenicereus undatus HOM05D008627 ORTHO05D010841 3.4e-18 95.9 62 79.0
Prupe.3G229600 Prunus persica HOM05D008627 ORTHO05D010841 9.8e-18 94.4 72 63.9
Dinv20704 Davidia involucrata HOM05D008627 ORTHO05D010841 2.2e-17 93.2 117 47.0
Cre12.g559150 Chlamydomonas reinhardtii HOM05D008627 ORTHO05D010841 1.0e-14 84.3 155 34.2
vmacro16453 Vaccinium macrocarpon HOM05D003846 ORTHO05D004726 9.1e-08 61.2 164 29.9
SMO356G0199 Selaginella moellendorffii HOM05D003846 ORTHO05D004726 1.6e-07 60.5 116 32.8
Aa31LG6G7320 Aethionema arabicum HOM05D003846 ORTHO05D004726 3.5e-07 59.3 125 34.4
Zm00001eb041630 Zea mays HOM05D003846 ORTHO05D004726 3.5e-07 59.3 116 35.3
C02p25100 Brassica napus HOM05D003846 ORTHO05D004726 5.9e-07 58.5 120 33.3
Lalb_Chr14g0371301 Lupinus albus HOM05D003846 ORTHO05D004726 5.9e-07 58.5 145 31.7
Ah.02g127070 Amaranthus hybridus HOM05D003846 ORTHO05D004726 7.7e-07 58.2 157 30.6
CARHR061470 Cardamine hirsuta HOM05D003846 ORTHO05D004726 7.7e-07 58.2 162 30.2
Duzib204G0001 Durio zibethinus HOM05D003846 ORTHO05D004726 7.7e-07 58.2 149 32.2
Duzib248G0399 Durio zibethinus HOM05D003846 ORTHO05D004726 7.7e-07 58.2 149 32.2
Gohir.A13G053526 Gossypium hirsutum HOM05D003846 ORTHO05D004726 7.7e-07 58.2 159 30.2
Lj2g0006290 Lotus japonicus HOM05D003846 ORTHO05D004726 7.7e-07 58.2 114 32.5
TWI31G0653 Tripterygium wilfordii HOM05D003846 ORTHO05D004726 7.7e-07 58.2 154 27.9
AT1G68660 Arabidopsis thaliana HOM05D003846 ORTHO05D004726 1.0e-06 57.8 162 30.2
Migut.D01214 Erythranthe guttata HOM05D003846 ORTHO05D004726 1.0e-06 57.8 116 31.0
Glyma.07G089500 Glycine max HOM05D003846 ORTHO05D004726 1.0e-06 57.8 141 31.2
Glyma.09G187300 Glycine max HOM05D003846 ORTHO05D004726 1.0e-06 57.8 141 31.2
Sp5g23760 Schrenkiella parvula HOM05D003846 ORTHO05D004726 1.0e-06 57.8 161 29.8
TPR.G9001 Trifolium pratense HOM05D003846 ORTHO05D004726 1.0e-06 57.8 151 29.8
GSVIVG01008253001 Vitis vinifera HOM05D003846 ORTHO05D004726 1.0e-06 57.8 116 31.9
arahy.Tifrunner.gnm1.ann1.5K2M2S Arachis hypogaea HOM05D003846 ORTHO05D004726 1.3e-06 57.4 120 32.5
arahy.Tifrunner.gnm1.ann1.5U1FHR Arachis hypogaea HOM05D003846 ORTHO05D004726 1.3e-06 57.4 120 32.5
Thhalv10019264m.g Eutrema salsugineum HOM05D003846 ORTHO05D004726 1.3e-06 57.4 161 29.8
Gorai.013G080600 Gossypium raimondii HOM05D003846 ORTHO05D004726 1.3e-06 57.4 123 33.3
MBI19_g21095_MAGBIO Magnolia biondii HOM05D003846 ORTHO05D004726 1.3e-06 57.4 149 30.2
Potri.010G128500 Populus trichocarpa HOM05D003846 ORTHO05D004726 1.3e-06 57.4 122 32.8
AL2G27580 Arabidopsis lyrata HOM05D003846 ORTHO05D004726 1.7e-06 57.0 120 32.5
arahy.Tifrunner.gnm1.ann1.72UZVS Arachis hypogaea HOM05D003846 ORTHO05D004726 1.7e-06 57.0 114 33.3
BcaB03g15438 Brassica carinata HOM05D003846 ORTHO05D004726 1.7e-06 57.0 137 31.4
BcaB03g15443 Brassica carinata HOM05D003846 ORTHO05D004726 1.7e-06 57.0 137 31.4
BcaB05g24403 Brassica carinata HOM05D003846 ORTHO05D004726 1.7e-06 57.0 120 32.5
BcaC03g14976 Brassica carinata HOM05D003846 ORTHO05D004726 1.7e-06 57.0 120 32.5
A07p31880 Brassica napus HOM05D003846 ORTHO05D004726 1.7e-06 57.0 120 32.5
C06p37450 Brassica napus HOM05D003846 ORTHO05D004726 1.7e-06 57.0 120 32.5
BolC2t08590H Brassica oleracea HOM05D003846 ORTHO05D004726 1.7e-06 57.0 120 32.5
BolC6t38848H Brassica oleracea HOM05D003846 ORTHO05D004726 1.7e-06 57.0 120 32.5
BraA07t30817Z Brassica rapa HOM05D003846 ORTHO05D004726 1.7e-06 57.0 125 32.0
ECA246G4193 Erigeron canadensis HOM05D003846 ORTHO05D004726 1.7e-06 57.0 160 29.4
Gohir.D13G070700 Gossypium hirsutum HOM05D003846 ORTHO05D004726 1.7e-06 57.0 159 30.2
Gorai.013G080900 Gossypium raimondii HOM05D003846 ORTHO05D004726 1.7e-06 57.0 159 30.2
TWI79G0122 Tripterygium wilfordii HOM05D003846 ORTHO05D004726 1.7e-06 57.0 159 29.6
TAR374G1390 Trochodendron aralioides HOM05D003846 ORTHO05D004726 1.7e-06 57.0 116 31.9
ATR0665G367 Amborella trichopoda HOM05D003846 ORTHO05D004726 2.3e-06 56.6 114 32.5
A02p15260 Brassica napus HOM05D003846 ORTHO05D004726 2.3e-06 56.6 141 31.2
BraA02t06588Z Brassica rapa HOM05D003846 ORTHO05D004726 2.3e-06 56.6 141 31.2
Carub.0002s1520 Capsella rubella HOM05D003846 ORTHO05D004726 2.3e-06 56.6 162 29.6
AUR62002909 Chenopodium quinoa HOM05D003846 ORTHO05D004726 2.3e-06 56.6 152 31.6
COL.COLO4_07882 Corchorus olitorius HOM05D000199 ORTHO05D000550 2.3e-06 56.6 121 33.1
Dinv21120 Davidia involucrata HOM05D003846 ORTHO05D004726 2.3e-06 56.6 116 31.0
Duzib251G0345 Durio zibethinus HOM05D003846 ORTHO05D004726 2.3e-06 56.6 121 33.1
Glyma.02G098100 Glycine max HOM05D003846 ORTHO05D004726 2.3e-06 56.6 116 33.6
Lsat_1_v5_gn_3_40660 Lactuca sativa HOM05D003846 ORTHO05D004726 2.3e-06 56.6 163 28.8
Medtr5g054770 Medicago truncatula HOM05D003846 ORTHO05D004726 2.3e-06 56.6 117 31.6
PGR044G0282 Punica granatum HOM05D003846 ORTHO05D004726 2.3e-06 56.6 116 31.0
Zm00001eb179570 Zea mays HOM05D003846 ORTHO05D004726 2.3e-06 56.6 116 31.9
Cre17.g696400 Chlamydomonas reinhardtii HOM05D003846 ORTHO05D004726 2.9e-06 56.2 73 41.1
CsaV3_1G006510 Cucumis sativus L. HOM05D003846 ORTHO05D004726 2.9e-06 56.2 116 31.0
Lj2g0005403 Lotus japonicus HOM05D003846 ORTHO05D004726 2.9e-06 56.2 114 30.7
Lalb_Chr17g0341961 Lupinus albus HOM05D003846 ORTHO05D004726 2.9e-06 56.2 116 31.9
Nn3g17770 Nelumbo nucifera HOM05D003846 ORTHO05D004726 2.9e-06 56.2 116 31.0
Rhsim12G0144000 Rhododendron simsii HOM05D003846 ORTHO05D004726 2.9e-06 56.2 116 31.9
Thecc.02G359500 Theobroma cacao HOM05D003846 ORTHO05D004726 2.9e-06 56.2 116 31.9
TPR.G38292 Trifolium pratense HOM05D003846 ORTHO05D004726 2.9e-06 56.2 117 30.8
Ah.03g137840 Amaranthus hybridus HOM05D003846 ORTHO05D004726 3.8e-06 55.8 142 27.5
Cpa.g.sc1.209 Carica papaya HOM05D003846 ORTHO05D004726 3.8e-06 55.8 116 31.0
CiPaw.16G084800 Carya illinoinensis HOM05D003846 ORTHO05D004726 3.8e-06 55.8 116 31.0
Glyma.01G084700 Glycine max HOM05D003846 ORTHO05D004726 3.8e-06 55.8 114 33.3
Gohir.A13G053470 Gossypium hirsutum HOM05D003846 ORTHO05D004726 3.8e-06 55.8 123 33.3
HanXRQChr06g0171111 Helianthus annuus HOM05D003846 ORTHO05D004726 3.8e-06 55.8 116 31.9
Os08g0432500 Oryza sativa ssp. japonica HOM05D003846 ORTHO05D004726 3.8e-06 55.8 116 31.9
Hund25092 Selenicereus undatus HOM05D003846 ORTHO05D004726 3.8e-06 55.8 150 30.0
Cfa019801 Carpinus fangiana HOM05D003846 ORTHO05D004726 5.0e-06 55.5 116 31.0
ClCG04G011240 Citrullus lanatus HOM05D003846 ORTHO05D004726 5.0e-06 55.5 116 31.0
Haze_18631 Corylus avellana HOM05D003846 ORTHO05D004726 5.0e-06 55.5 116 31.0
MELO3C002078.2 Cucumis melo HOM05D003846 ORTHO05D004726 5.0e-06 55.5 116 31.0
Dinv40424 Davidia involucrata HOM05D003846 ORTHO05D004726 5.0e-06 55.5 122 32.8
MD16G1046400 Malus domestica HOM05D003846 ORTHO05D004726 5.0e-06 55.5 114 29.8
Mapoly0068s0048 Marchantia polymorpha HOM05D003846 ORTHO05D004726 5.0e-06 55.5 114 30.7
Nitab4.5_0010565g0020 Nicotiana tabacum HOM05D003846 ORTHO05D004726 5.0e-06 55.5 121 33.1
Oeu024319.1 Olea europaea HOM05D003846 ORTHO05D004726 5.0e-06 55.5 117 29.9
Prupe.1G306800 Prunus persica HOM05D003846 ORTHO05D004726 5.0e-06 55.5 116 28.4
Sabra10G0097700 Salix brachista HOM05D003846 ORTHO05D004726 5.0e-06 55.5 121 31.4
unitig_21.g20429 Utricularia gibba HOM05D003846 ORTHO05D004726 5.0e-06 55.5 134 28.4
Aqoxy3G00349 Aquilegia oxysepala HOM05D003846 ORTHO05D004726 6.6e-06 55.1 117 32.5
Dinv07363 Davidia involucrata HOM05D003846 ORTHO05D004726 6.6e-06 55.1 116 31.0
Eucgr.K02665 Eucalyptus grandis HOM05D003846 ORTHO05D004726 6.6e-06 55.1 116 30.2
Lj9A429T51 Lonicera japonica HOM05D003846 ORTHO05D004726 6.6e-06 55.1 120 31.7
MD13G1045100 Malus domestica HOM05D003846 ORTHO05D004726 6.6e-06 55.1 114 29.8
Phvul.003G028500 Phaseolus vulgaris HOM05D003846 ORTHO05D004726 6.6e-06 55.1 114 29.8
VMungo1215G1161 Vigna mungo HOM05D003846 ORTHO05D004726 6.6e-06 55.1 114 31.6
MSTRG.9269 Avicennia marina HOM05D003846 ORTHO05D004726 8.6e-06 54.7 160 26.9
CiPaw.15G127700 Carya illinoinensis HOM05D003846 ORTHO05D004726 8.6e-06 54.7 116 31.0
AUR62035268 Chenopodium quinoa HOM05D003846 ORTHO05D004726 8.6e-06 54.7 149 30.9
ClCG05G022950 Citrullus lanatus HOM05D003846 ORTHO05D004726 8.6e-06 54.7 116 30.2
Ciclev10032968m.g Citrus clementina HOM05D003846 ORTHO05D004726 8.6e-06 54.7 172 29.1
DCAR_023191 Daucus carota HOM05D003846 ORTHO05D004726 8.6e-06 54.7 130 29.2
Gohir.D13G070400 Gossypium hirsutum HOM05D003846 ORTHO05D004726 8.6e-06 54.7 123 31.7
Potri.008G117800 Populus trichocarpa HOM05D003846 ORTHO05D004726 8.6e-06 54.7 121 32.2
QL10p023733 Quercus lobata HOM05D003846 ORTHO05D004726 8.6e-06 54.7 126 28.6
Sed0019100 Sechium edule HOM05D003846 ORTHO05D004726 8.6e-06 54.7 117 29.9
Solyc03g119700.3 Solanum lycopersicum HOM05D003846 ORTHO05D004726 8.6e-06 54.7 116 30.2
Sopen03g038530 Solanum pennellii HOM05D003846 ORTHO05D004726 8.6e-06 54.7 116 30.2
PGSC0003DMG400005627 Solanum tuberosum HOM05D003846 ORTHO05D004726 8.6e-06 54.7 116 30.2
THA.LOC104821956 Tarenaya hassleriana HOM05D003846 ORTHO05D004726 8.6e-06 54.7 75 37.3


User provided reference genes

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