Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib151G0689 Durio zibethinus HOM05D008157 ORTHO05D009575 5.3e-93 344.4 175 100.0
Thecc.04G264100 Theobroma cacao HOM05D008157 ORTHO05D009575 1.8e-69 266.2 175 80.0
Gohir.D02G048700 Gossypium hirsutum HOM05D008157 ORTHO05D009575 5.5e-58 228.0 174 70.1
Gohir.A02G043000 Gossypium hirsutum HOM05D008157 ORTHO05D009575 2.1e-57 226.1 174 69.5
COL.COLO4_15964 Corchorus olitorius HOM05D008157 ORTHO05D009575 2.5e-42 176.0 151 63.6
Manes.03G158800 Manihot esculenta HOM05D008157 ORTHO05D009575 5.9e-36 154.8 170 54.7
Manes.15G045800 Manihot esculenta HOM05D008157 ORTHO05D009575 1.1e-34 150.6 167 53.3
Potri.010G065666 Populus trichocarpa HOM05D008157 ORTHO05D009575 1.6e-33 146.7 167 52.7
Sabra08G0131300 Salix brachista HOM05D008157 ORTHO05D009575 6.4e-30 134.8 169 49.1
Potri.008G172000 Populus trichocarpa HOM05D008157 ORTHO05D009575 1.4e-29 133.7 148 52.7
Sabra10G0041500 Salix brachista HOM05D008157 ORTHO05D009575 1.7e-27 126.7 153 52.3
TWI09G0993 Tripterygium wilfordii HOM05D008157 ORTHO05D009575 3.3e-26 122.5 174 42.0
Haze_11459 Corylus avellana HOM05D008157 ORTHO05D009575 7.3e-26 121.3 183 42.1
QL06p021011 Quercus lobata HOM05D008157 ORTHO05D009575 9.5e-26 120.9 183 41.5
Prupe.1G048400 Prunus persica HOM05D008157 ORTHO05D009575 4.7e-25 118.6 152 48.0
MD16G1226400 Malus domestica HOM05D008157 ORTHO05D009575 1.3e-22 110.5 155 49.7
CiPaw.02G106900 Carya illinoinensis HOM05D008157 ORTHO05D009575 1.4e-21 107.1 173 42.8
Atru.chr4.1914 Acer truncatum HOM05D008157 ORTHO05D009575 1.6e-20 103.6 168 42.9
TAR365G0204 Trochodendron aralioides HOM05D008157 ORTHO05D009575 2.1e-20 103.2 176 39.8
TAR633G2472 Trochodendron aralioides HOM05D008157 ORTHO05D009575 7.8e-20 101.3 92 56.5
ClCG05G003990 Citrullus lanatus HOM05D008157 ORTHO05D009575 1.1e-18 97.4 153 41.2
Dinv27113 Davidia involucrata HOM05D008157 ORTHO05D009575 1.1e-18 97.4 176 37.5
FvH4_4g04630 Fragaria vesca HOM05D008157 ORTHO05D009575 1.5e-18 97.1 155 43.9
FAN12G3964 Fragaria x ananassa HOM05D008157 ORTHO05D009575 2.5e-18 96.3 155 43.2
CANSAT78G1852 Cannabis sativa HOM05D008157 ORTHO05D009575 9.5e-18 94.4 156 42.9
Sed0015987 Sechium edule HOM05D008157 ORTHO05D009575 1.4e-16 90.5 152 40.1
MBI10_g35435_MAGBIO Magnolia biondii HOM05D008157 ORTHO05D009575 1.2e-15 87.4 169 35.5
MELO3C006376.2 Cucumis melo HOM05D008157 ORTHO05D009575 3.4e-15 85.9 156 41.0
Aqoxy5G00149 Aquilegia oxysepala HOM05D000655 ORTHO05D001635 4.4e-15 85.5 139 40.3
CsaV3_3G011680 Cucumis sativus L. HOM05D008157 ORTHO05D009575 5.8e-15 85.1 156 39.1
Lj5g0023776 Lotus japonicus HOM05D012468 ORTHO05D009575 1.3e-14 84.0 146 39.7
Nn1g02959 Nelumbo nucifera HOM05D008157 ORTHO05D009575 1.7e-14 83.6 116 44.0
RcHm_v2.0_Chr4g0395401 Rosa chinensis HOM05D008157 ORTHO05D009575 2.2e-14 83.2 121 47.9
CSS0033147 Camellia sinensis var. sinensis HOM05D008157 ORTHO05D009575 6.4e-14 81.6 149 42.3
DCAR_030762 Daucus carota HOM05D008157 ORTHO05D009575 3.2e-13 79.3 114 42.1
PGR004G0105 Punica granatum HOM05D008157 ORTHO05D009575 7.8e-12 74.7 112 42.0
EL10Ac3g06669 Beta vulgaris HOM05D008157 ORTHO05D009575 1.0e-11 74.3 106 39.6
Rhsim02G0043800 Rhododendron simsii HOM05D008157 ORTHO05D009575 3.0e-11 72.8 175 33.7
VMungo1215G2213 Vigna mungo HOM05D012468 ORTHO05D009575 6.6e-11 71.6 136 36.8
Hma1.2p1_0112F.1_g054760 Hydrangea macrophylla HOM05D008157 ORTHO05D009575 1.1e-10 70.9 115 40.9
VMungo0720G2187 Vigna mungo HOM05D012468 ORTHO05D009575 1.5e-10 70.5 155 37.4
Glyma.20G200000 Glycine max HOM05D012468 ORTHO05D009575 2.5e-10 69.7 166 36.7
Hma1.2p1_0273F.1_g109240 Hydrangea macrophylla HOM05D008157 ORTHO05D009575 2.5e-10 69.7 111 35.1
Hma1.2p1_1702F.1_g298280 Hydrangea macrophylla HOM05D008157 ORTHO05D009575 4.3e-10 68.9 111 35.1
Cc03_g06320 Coffea canephora HOM05D008157 ORTHO05D009575 7.3e-10 68.2 122 38.5
Cc09_g08530 Coffea canephora HOM05D008157 ORTHO05D009575 7.3e-10 68.2 122 38.5
SalBow2G3016 Salvia bowleyana HOM05D008157 ORTHO05D009575 7.3e-10 68.2 163 35.6
MSTRG.4173 Avicennia marina HOM05D008157 ORTHO05D009575 2.1e-09 66.6 114 38.6
Hund20495 Selenicereus undatus HOM05D008157 ORTHO05D009575 2.1e-09 66.6 198 29.8
Phvul.011G133515 Phaseolus vulgaris HOM05D012468 ORTHO05D009575 3.6e-09 65.9 151 34.4
Duzib052G1064 Durio zibethinus HOM05D000655 ORTHO05D001635 1.1e-08 64.3 38 84.2
Nitab4.5_0007351g0030 Nicotiana tabacum HOM05D008157 ORTHO05D009575 3.1e-08 62.8 142 31.0
SGA_v2.0_scaffold67G22685 Striga asiatica HOM05D008157 ORTHO05D009575 5.2e-08 62.0 126 34.1
Nitab4.5_0000194g0130 Nicotiana tabacum HOM05D008157 ORTHO05D009575 6.8e-08 61.6 114 34.2
Cfa014784 Carpinus fangiana HOM05D008391 ORTHO05D009743 2.0e-07 60.1 96 39.6
Medtr1g073260 Medicago truncatula HOM05D012468 ORTHO05D009575 2.0e-07 60.1 106 41.5
Nitab4.5_0000194g0190 Nicotiana tabacum HOM05D008157 ORTHO05D009575 2.6e-07 59.7 142 31.7
PSO764G0012 Papaver somniferum HOM05D008157 ORTHO05D009575 2.6e-07 59.7 149 30.2
Lalb_Chr06g0169531 Lupinus albus HOM05D012468 ORTHO05D009575 4.4e-07 58.9 161 34.2
THA.LOC104808976 Tarenaya hassleriana HOM05D012000 ORTHO05D013959 4.4e-07 58.9 140 35.0
Ca_09800_v3 Cicer arietinum L. HOM05D012468 ORTHO05D009575 2.2e-06 56.6 225 28.9
Solyc09g090710.3 Solanum lycopersicum HOM05D008157 ORTHO05D009575 2.2e-06 56.6 76 42.1
GSVIVG01027916001 Vitis vinifera HOM05D008157 ORTHO05D009575 3.8e-06 55.8 162 32.7
CiPaw.03G270400 Carya illinoinensis HOM05D014916 ORTHO05D009575 8.4e-06 54.7 154 28.6
Thecc.01G251000 Theobroma cacao HOM05D014916 ORTHO05D009575 8.4e-06 54.7 159 27.7
GSVIVG01028417001 Vitis vinifera HOM05D008157 ORTHO05D009575 8.4e-06 54.7 144 32.6


User provided reference genes

Program Settings