Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib151G0660 Durio zibethinus HOM05D004244 ORTHO05D004964 1.7e-127 459.5 266 100.0
Duzib052G0780 Durio zibethinus HOM05D004244 ORTHO05D004964 4.9e-74 282.0 264 65.9
COL.COLO4_16006 Corchorus olitorius HOM05D004244 ORTHO05D004964 4.0e-68 262.3 263 60.5
Gohir.D09G232300 Gossypium hirsutum HOM05D004244 ORTHO05D004964 4.8e-61 238.8 239 61.1
Gorai.006G255200 Gossypium raimondii HOM05D004244 ORTHO05D004964 1.1e-60 237.7 239 60.7
Gohir.A09G231200 Gossypium hirsutum HOM05D004244 ORTHO05D004964 5.3e-60 235.3 239 60.7
Thecc.04G269100 Theobroma cacao HOM05D004244 ORTHO05D004964 6.4e-58 228.4 270 57.0
Duzib266G0003 Durio zibethinus HOM05D004244 ORTHO05D004964 8.4e-50 201.4 159 75.5
Duzib052G0270 Durio zibethinus HOM05D004244 ORTHO05D004964 6.2e-45 185.3 166 64.5
Glyma.10G132400 Glycine max HOM05D004244 ORTHO05D004964 4.5e-27 125.9 198 41.4
Lj6g0017438 Lotus japonicus HOM05D004244 ORTHO05D004964 4.5e-27 125.9 189 45.5
FvH4_4g05190 Fragaria vesca HOM05D004244 ORTHO05D004964 2.2e-26 123.6 202 41.6
Medtr1g045520 Medicago truncatula HOM05D004244 ORTHO05D004964 2.9e-26 123.2 193 43.5
Phvul.007G227000 Phaseolus vulgaris HOM05D004244 ORTHO05D004964 3.8e-26 122.9 191 41.4
FAN12G2846 Fragaria x ananassa HOM05D004244 ORTHO05D004964 5.0e-26 122.5 202 41.6
FAN17G1122 Fragaria x ananassa HOM05D004244 ORTHO05D004964 6.5e-26 122.1 202 41.1
TAR362G0565 Trochodendron aralioides HOM05D004244 ORTHO05D004964 4.2e-25 119.4 192 40.6
Prupe.1G052600 Prunus persica HOM05D004244 ORTHO05D004964 1.6e-24 117.5 230 37.4
Aqoxy5G00098 Aquilegia oxysepala HOM05D004244 ORTHO05D004964 2.1e-24 117.1 195 37.9
Lalb_Chr03g0036891 Lupinus albus HOM05D004244 ORTHO05D004964 2.7e-24 116.7 223 37.7
Ca_11893_v3 Cicer arietinum L. HOM05D004244 ORTHO05D004964 3.6e-24 116.3 192 39.1
MSTRG.24646 Avicennia marina HOM05D004244 ORTHO05D004964 4.7e-24 115.9 171 48.0
arahy.Tifrunner.gnm1.ann1.QYR710 Arachis hypogaea HOM05D004244 ORTHO05D004964 7.9e-24 115.2 190 40.0
Cfa014824 Carpinus fangiana HOM05D004244 ORTHO05D004964 1.0e-23 114.8 173 41.6
MD13G1225800 Malus domestica HOM05D004244 ORTHO05D004964 1.4e-23 114.4 200 41.5
arahy.Tifrunner.gnm1.ann1.9VYP7U Arachis hypogaea HOM05D004244 ORTHO05D004964 1.8e-23 114.0 191 39.8
Manes.03G156200 Manihot esculenta HOM05D004244 ORTHO05D004964 2.3e-23 113.6 300 33.3
CANSAT78G2336 Cannabis sativa HOM05D004244 ORTHO05D004964 3.0e-23 113.2 195 49.7
Potri.010G063300 Populus trichocarpa HOM05D004244 ORTHO05D004964 3.9e-23 112.8 220 34.1
QL06p021978 Quercus lobata HOM05D004244 ORTHO05D004964 3.9e-23 112.8 176 40.9
TAR633G1781 Trochodendron aralioides HOM05D004244 ORTHO05D004964 3.9e-23 112.8 219 37.4
MD16G1230800 Malus domestica HOM05D004244 ORTHO05D004964 5.1e-23 112.5 200 39.0
Nn3g19830 Nelumbo nucifera HOM05D004244 ORTHO05D004964 5.1e-23 112.5 225 37.3
TWI09G1213 Tripterygium wilfordii HOM05D004244 ORTHO05D004964 4.4e-22 109.4 193 45.1
ECA238G3737 Erigeron canadensis HOM05D004244 ORTHO05D004964 5.7e-22 109.0 188 45.2
GSVIVG01001856001 Vitis vinifera HOM05D004244 ORTHO05D004964 5.7e-22 109.0 220 37.7
CiPaw.01G175300 Carya illinoinensis HOM05D004244 ORTHO05D004964 9.7e-22 108.2 199 36.7
CsaV3_2G012190 Cucumis sativus L. HOM05D004244 ORTHO05D004964 9.7e-22 108.2 152 46.7
Cpa.g.sc59.37 Carica papaya HOM05D004244 ORTHO05D004964 1.3e-21 107.8 168 41.7
Nn1g03029 Nelumbo nucifera HOM05D004244 ORTHO05D004964 1.3e-21 107.8 199 40.2
Dinv27132 Davidia involucrata HOM05D004244 ORTHO05D004964 1.7e-21 107.5 210 45.2
Hma1.2p1_0112F.1_g054970 Hydrangea macrophylla HOM05D004244 ORTHO05D004964 2.2e-21 107.1 195 40.0
Cc03_g06840 Coffea canephora HOM05D004244 ORTHO05D004964 3.7e-21 106.3 176 40.3
TPR.G23981 Trifolium pratense HOM05D004244 ORTHO05D004964 4.8e-21 105.9 193 38.3
MBI07_g19046_MAGBIO Magnolia biondii HOM05D004244 ORTHO05D004964 2.4e-20 103.6 191 39.3
MELO3C023072.2 Cucumis melo HOM05D004244 ORTHO05D004964 1.5e-19 100.9 156 42.9
Nitab4.5_0000867g0080 Nicotiana tabacum HOM05D004244 ORTHO05D004964 2.0e-19 100.5 184 37.5
Atru.chr4.1873 Acer truncatum HOM05D004244 ORTHO05D004964 2.6e-19 100.1 204 41.2
Lsat_1_v5_gn_2_42020 Lactuca sativa HOM05D004244 ORTHO05D004964 5.9e-19 99.0 175 41.7
Peaxi162Scf00125g01118 Petunia axillaris HOM05D004244 ORTHO05D004964 5.9e-19 99.0 170 37.6
Nitab4.5_0000451g0020 Nicotiana tabacum HOM05D004244 ORTHO05D004964 1.0e-18 98.2 174 39.1
Actinidia11381 Actinidia chinensis HOM05D004244 ORTHO05D004964 1.7e-18 97.4 139 42.4
SalBow3G0496 Salvia bowleyana HOM05D004244 ORTHO05D004964 2.2e-18 97.1 166 39.2
SalBow3G1459 Salvia bowleyana HOM05D004244 ORTHO05D004964 2.2e-18 97.1 166 39.2
Haze_11497 Corylus avellana HOM05D004244 ORTHO05D004964 3.8e-18 96.3 162 38.3
Sed0027895 Sechium edule HOM05D004244 ORTHO05D004964 6.5e-18 95.5 223 39.0
PSO674G0105 Papaver somniferum HOM05D004244 ORTHO05D004964 1.4e-17 94.4 170 37.6
VMungo0720G2410 Vigna mungo HOM05D004244 ORTHO05D004964 4.2e-17 92.8 124 46.0
Actinidia39939 Actinidia chinensis HOM05D004244 ORTHO05D004964 5.5e-17 92.4 163 45.4
PSO170G0851 Papaver somniferum HOM05D004244 ORTHO05D004964 7.2e-17 92.0 163 38.0
Migut.N00322 Erythranthe guttata HOM05D004244 ORTHO05D004964 1.2e-16 91.3 220 36.8
PGR004G0368 Punica granatum HOM05D004244 ORTHO05D004964 1.6e-16 90.9 200 46.0
Eucgr.H02883 Eucalyptus grandis HOM05D004244 ORTHO05D004964 2.1e-16 90.5 135 52.6
Actinidia34761 Actinidia chinensis HOM05D004244 ORTHO05D004964 1.0e-15 88.2 188 34.6
GSVIVG01026322001 Vitis vinifera HOM05D004244 ORTHO05D004964 6.7e-15 85.5 136 39.0
COL.COLO4_15535 Corchorus olitorius HOM05D004244 ORTHO05D004964 8.8e-15 85.1 149 34.2
Eucgr.B01738 Eucalyptus grandis HOM05D004244 ORTHO05D004964 2.0e-14 84.0 142 33.8
Psat1g024120 Pisum sativum HOM05D004244 ORTHO05D004964 2.0e-14 84.0 142 50.0
Actinidia38930 Actinidia chinensis HOM05D004244 ORTHO05D004964 5.7e-14 82.4 190 34.2
Sabra10G0043500 Salix brachista HOM05D004244 ORTHO05D004964 7.4e-14 82.0 205 29.3
Gohir.D11G254600 Gossypium hirsutum HOM05D004244 ORTHO05D004964 9.7e-14 81.6 149 32.2
Gorai.007G273200 Gossypium raimondii HOM05D004244 ORTHO05D004964 9.7e-14 81.6 149 32.2
PGSC0003DMG402001493 Solanum tuberosum HOM05D004244 ORTHO05D004964 1.3e-13 81.3 171 36.8
Hund24865 Selenicereus undatus HOM05D004244 ORTHO05D004964 1.7e-13 80.9 141 36.9
Solyc09g091010.3 Solanum lycopersicum HOM05D004244 ORTHO05D004964 1.7e-13 80.9 172 35.5
SGA_v2.0_scaffold398G50771 Striga asiatica HOM05D004244 ORTHO05D004964 2.2e-13 80.5 157 37.6
Sopen09g033990 Solanum pennellii HOM05D004244 ORTHO05D004964 6.3e-13 79.0 172 34.9
Manes.08G141600 Manihot esculenta HOM05D004244 ORTHO05D004964 1.1e-12 78.2 157 33.1
ClCG06G007490 Citrullus lanatus HOM05D004244 ORTHO05D004964 1.4e-12 77.8 227 30.4
Sc19g0005660 Simmondsia chinensis HOM05D004244 ORTHO05D004964 1.4e-12 77.8 159 35.8
CDE11G0045 Ceratophyllum demersum HOM05D004244 ORTHO05D004964 3.1e-12 76.6 216 30.6
Rhsim02G0048800 Rhododendron simsii HOM05D004244 ORTHO05D004964 3.1e-12 76.6 149 36.9
EL10Ac3g06716 Beta vulgaris HOM05D004244 ORTHO05D004964 1.2e-11 74.7 142 38.7
BcaB06g28663 Brassica carinata HOM05D006155 ORTHO05D007529 1.2e-11 74.7 131 36.6
BcaC02g07850 Brassica carinata HOM05D004244 ORTHO05D004964 1.2e-11 74.7 131 36.6
Sp4g15550 Schrenkiella parvula HOM05D004244 ORTHO05D004964 1.2e-11 74.7 150 34.7
BraA04t18060Z Brassica rapa HOM05D006155 ORTHO05D007529 2.6e-11 73.6 134 36.6
Ciclev10005346m.g Citrus clementina HOM05D004244 ORTHO05D004964 4.5e-11 72.8 132 38.6
Ciclev10021373m.g Citrus clementina HOM05D004244 ORTHO05D004964 4.5e-11 72.8 159 34.6
Oeu010184.1 Olea europaea HOM05D004244 ORTHO05D004964 4.5e-11 72.8 134 35.8
C04p62700 Brassica napus HOM05D006155 ORTHO05D007529 5.9e-11 72.4 148 35.1
Hma1.2p1_0130F.1_g060490 Hydrangea macrophylla HOM05D004244 ORTHO05D004964 5.9e-11 72.4 201 37.8
Medtr4g088590 Medicago truncatula HOM05D004244 ORTHO05D004964 5.9e-11 72.4 109 43.1
Atru.chr2.1111 Acer truncatum HOM05D004244 ORTHO05D004964 7.7e-11 72.0 179 31.8
Gohir.A11G244500 Gossypium hirsutum HOM05D004244 ORTHO05D004964 7.7e-11 72.0 117 34.2
Nitab4.5_0008594g0020 Nicotiana tabacum HOM05D004244 ORTHO05D004964 7.7e-11 72.0 166 30.7
Rhsim09G0132600 Rhododendron simsii HOM05D004244 ORTHO05D004964 1.3e-10 71.2 135 35.6
Nitab4.5_0000841g0060 Nicotiana tabacum HOM05D004244 ORTHO05D004964 2.2e-10 70.5 166 29.5
BcaC02g07847 Brassica carinata HOM05D004244 ORTHO05D004964 2.9e-10 70.1 148 35.1
A04p25560 Brassica napus HOM05D004244 ORTHO05D004964 2.9e-10 70.1 60 55.0
Duzib106G0844 Durio zibethinus HOM05D004244 ORTHO05D004964 3.8e-10 69.7 167 31.7
PGR031G0411 Punica granatum HOM05D004244 ORTHO05D004964 3.8e-10 69.7 154 33.8
AT2G33250 Arabidopsis thaliana HOM05D004244 ORTHO05D004964 5.0e-10 69.3 142 34.5
BolC4t27754H Brassica oleracea HOM05D006155 ORTHO05D007529 5.0e-10 69.3 148 34.5
Potri.019G023400 Populus trichocarpa HOM05D004244 ORTHO05D004964 8.5e-10 68.6 123 36.6
Cpa.g.sc756.3 Carica papaya HOM05D004244 ORTHO05D004964 1.1e-09 68.2 121 33.9
Migut.F02055 Erythranthe guttata HOM05D004244 ORTHO05D004964 1.1e-09 68.2 151 40.4
HPP92_025817 Vanilla planifolia HOM05D004244 ORTHO05D004964 1.9e-09 67.4 177 31.1
CARHR127250 Cardamine hirsuta HOM05D004244 ORTHO05D004964 2.5e-09 67.0 136 30.9
Thhalv10017015m.g Eutrema salsugineum HOM05D004244 ORTHO05D004964 3.2e-09 66.6 141 34.0
Aa31LG5G4140 Aethionema arabicum HOM05D004244 ORTHO05D004964 7.2e-09 65.5 168 31.5
AL4G28880 Arabidopsis lyrata HOM05D004244 ORTHO05D004964 7.2e-09 65.5 162 32.7
MSTRG.9217 Avicennia marina HOM05D004244 ORTHO05D004964 1.2e-08 64.7 134 43.3
Carub.0004s1471 Capsella rubella HOM05D004244 ORTHO05D004964 1.6e-08 64.3 138 34.8
Cc09_g03010 Coffea canephora HOM05D004244 ORTHO05D004964 2.7e-08 63.5 156 36.5
Thecc.05G266700 Theobroma cacao HOM05D004244 ORTHO05D004964 2.7e-08 63.5 117 33.3
SalBow1G0411 Salvia bowleyana HOM05D004244 ORTHO05D004964 3.6e-08 63.2 63 47.6
ATR0723G041 Amborella trichopoda HOM05D004244 ORTHO05D004964 4.7e-08 62.8 121 33.1
THA.LOC104826102 Tarenaya hassleriana HOM05D004244 ORTHO05D004964 8.0e-08 62.0 62 50.0
unitig_26.g9547 Utricularia gibba HOM05D004244 ORTHO05D004964 1.4e-07 61.2 134 31.3
Sabra19G0033400 Salix brachista HOM05D004244 ORTHO05D004964 1.8e-07 60.8 156 30.8
Sopen04g021060 Solanum pennellii HOM05D004244 ORTHO05D004964 4.0e-07 59.7 166 30.1
Os01g0680600 Oryza sativa ssp. japonica HOM05D004244 ORTHO05D004964 6.7e-07 58.9 72 43.1
Sc09g0001820 Simmondsia chinensis HOM05D004244 ORTHO05D004964 6.7e-07 58.9 180 31.7
CAN.G4.41 Capsicum annuum HOM05D004244 ORTHO05D004964 1.2e-06 58.2 131 34.4
Zm00001eb360230 Zea mays HOM05D004244 ORTHO05D004964 2.0e-06 57.4 77 42.9


User provided reference genes

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