Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib151G0206 Durio zibethinus HOM05D003671 ORTHO05D004285 0.0e+00 1701.8 894 100.0
Duzib212G0018 Durio zibethinus HOM05D003671 ORTHO05D004285 0.0e+00 1466.8 894 86.5
Thecc.04G154700 Theobroma cacao HOM05D003671 ORTHO05D004285 0.0e+00 1460.3 895 86.4
COL.COLO4_30007 Corchorus olitorius HOM05D003671 ORTHO05D004285 0.0e+00 1425.6 895 86.1
Gorai.005G122800 Gossypium raimondii HOM05D003671 ORTHO05D004285 0.0e+00 1313.1 885 77.6
Manes.09G115800 Manihot esculenta HOM05D003671 ORTHO05D004285 0.0e+00 1263.4 897 75.7
Gohir.A03G087500 Gossypium hirsutum HOM05D003671 ORTHO05D004285 0.0e+00 1257.7 886 77.7
Manes.09G116100 Manihot esculenta HOM05D003671 ORTHO05D004285 0.0e+00 1253.8 897 74.4
Gohir.A03G088100 Gossypium hirsutum HOM05D003671 ORTHO05D004285 0.0e+00 1250.0 884 77.7
Gohir.D02G108300 Gossypium hirsutum HOM05D003671 ORTHO05D004285 0.0e+00 1241.9 884 77.4
Gorai.005G122900 Gossypium raimondii HOM05D003671 ORTHO05D004285 0.0e+00 1241.1 884 77.4
Atru.chr8.2376 Acer truncatum HOM05D003671 ORTHO05D004285 0.0e+00 1229.9 898 75.3
Prupe.6G290600 Prunus persica HOM05D003671 ORTHO05D004285 0.0e+00 1224.9 904 72.8
Ciclev10011037m.g Citrus clementina HOM05D003671 ORTHO05D004285 0.0e+00 1218.0 898 73.8
Potri.006G107500 Populus trichocarpa HOM05D003671 ORTHO05D004285 0.0e+00 1196.8 896 72.7
Cfa017060 Carpinus fangiana HOM05D003671 ORTHO05D004285 0.0e+00 1195.6 898 74.8
RcHm_v2.0_Chr3g0460911 Rosa chinensis HOM05D003671 ORTHO05D004285 0.0e+00 1168.7 904 71.7
FAN05G5788 Fragaria x ananassa HOM05D003671 ORTHO05D004285 0.0e+00 1152.1 904 69.4
FAN05G3119 Fragaria x ananassa HOM05D003671 ORTHO05D004285 0.0e+00 1151.7 904 69.5
Dinv25318 Davidia involucrata HOM05D003671 ORTHO05D004285 0.0e+00 1149.0 899 69.0
Sabra06G0083600 Salix brachista HOM05D003671 ORTHO05D004285 0.0e+00 1136.3 896 70.0
QL07p032733 Quercus lobata HOM05D003671 ORTHO05D004285 0.0e+00 1134.4 864 73.3
FvH4_6g10170 Fragaria vesca HOM05D003671 ORTHO05D004285 0.0e+00 1132.1 904 71.0
FAN14G5445 Fragaria x ananassa HOM05D003671 ORTHO05D004285 0.0e+00 1128.2 904 70.9
Potri.016G133700 Populus trichocarpa HOM05D003671 ORTHO05D004285 0.0e+00 1125.5 896 69.3
Sabra04G0151200 Salix brachista HOM05D003671 ORTHO05D004285 0.0e+00 1122.5 896 70.3
CSS0036424 Camellia sinensis var. sinensis HOM05D003671 ORTHO05D004285 0.0e+00 1117.1 903 67.9
CSS0037141 Camellia sinensis var. sinensis HOM05D003671 ORTHO05D004285 0.0e+00 1116.3 903 67.8
TWI77G0322 Tripterygium wilfordii HOM05D003671 ORTHO05D004285 0.0e+00 1092.4 900 67.4
Hma1.2p1_1052F.1_g252340 Hydrangea macrophylla HOM05D003671 ORTHO05D004285 0.0e+00 1091.3 899 67.6
Cpa.g.sc86.30 Carica papaya HOM05D003671 ORTHO05D004285 0.0e+00 1084.3 803 75.0
Gohir.D02G108200 Gossypium hirsutum HOM05D003671 ORTHO05D004285 0.0e+00 1083.2 767 74.8
CiPaw.10G164200 Carya illinoinensis HOM05D003671 ORTHO05D004285 0.0e+00 1082.4 862 70.4
CANSAT35G0504 Cannabis sativa HOM05D003671 ORTHO05D004285 0.0e+00 1079.7 902 69.5
TAR636G3051 Trochodendron aralioides HOM05D003671 ORTHO05D004285 0.0e+00 1075.8 904 66.7
TAR633G2716 Trochodendron aralioides HOM05D003671 ORTHO05D004285 0.0e+00 1075.1 904 65.7
TAR636G0316 Trochodendron aralioides HOM05D003671 ORTHO05D004285 6.1e-312 1074.3 904 66.6
MD12G1185300 Malus domestica HOM05D003671 ORTHO05D004285 1.8e-311 1072.4 906 66.9
Rhsim05G0229100 Rhododendron simsii HOM05D003671 ORTHO05D004285 1.2e-310 1069.7 908 64.9
CSS0031435 Camellia sinensis var. sinensis HOM05D003671 ORTHO05D004285 1.8e-309 1065.8 903 65.2
TWI74G1343 Tripterygium wilfordii HOM05D003671 ORTHO05D004285 3.0e-309 1065.1 906 65.8
CSS0025205 Camellia sinensis var. sinensis HOM05D003671 ORTHO05D004285 8.7e-309 1063.5 903 65.1
FAN09G2383 Fragaria x ananassa HOM05D003671 ORTHO05D004285 3.3e-308 1061.6 904 67.8
Actinidia29047 Actinidia chinensis HOM05D003671 ORTHO05D004285 3.7e-307 1058.1 900 66.6
Actinidia11522 Actinidia chinensis HOM05D003671 ORTHO05D004285 3.1e-306 1055.0 904 65.4
Glyma.18G211200 Glycine max HOM05D003671 ORTHO05D004285 3.1e-306 1055.0 901 66.0
PGR004G1797 Punica granatum HOM05D003671 ORTHO05D004285 7.6e-305 1050.4 890 64.5
FAN02G1273 Fragaria x ananassa HOM05D003671 ORTHO05D004285 1.0e-304 1050.0 902 67.6
Eucgr.K01274 Eucalyptus grandis HOM05D003671 ORTHO05D004285 2.5e-303 1045.4 889 65.2
Glyma.18G212400 Glycine max HOM05D003671 ORTHO05D004285 2.5e-303 1045.4 897 66.9
CiPaw.09G218900 Carya illinoinensis HOM05D003671 ORTHO05D004285 3.5e-302 1041.6 900 66.4
TWI53G1222 Tripterygium wilfordii HOM05D003671 ORTHO05D004285 1.8e-301 1039.3 899 66.2
CsaV3_3G033210 Cucumis sativus L. HOM05D003671 ORTHO05D004285 3.0e-301 1038.5 914 65.9
MELO3C009114.2 Cucumis melo HOM05D003671 ORTHO05D004285 8.7e-301 1036.9 914 65.8
ClCG10G022620 Citrullus lanatus HOM05D003671 ORTHO05D004285 2.5e-300 1035.4 914 66.5
MD04G1172000 Malus domestica HOM05D003671 ORTHO05D004285 2.4e-298 1028.9 904 66.2
Sed0011007 Sechium edule HOM05D003671 ORTHO05D004285 2.4e-298 1028.9 915 65.8
Phvul.008G084400 Phaseolus vulgaris HOM05D003671 ORTHO05D004285 5.3e-298 1027.7 897 66.2
Haze_21142 Corylus avellana HOM05D003671 ORTHO05D004285 1.2e-297 1026.5 798 73.2
Phvul.008G084500 Phaseolus vulgaris HOM05D003671 ORTHO05D004285 2.6e-297 1025.4 897 66.1
Haze_21147 Corylus avellana HOM05D003671 ORTHO05D004285 4.5e-297 1024.6 798 73.1
Lj1g0018847 Lotus japonicus HOM05D003671 ORTHO05D004285 2.2e-296 1022.3 897 65.2
Glyma.09G277700 Glycine max HOM05D003671 ORTHO05D004285 2.9e-296 1021.9 901 64.8
arahy.Tifrunner.gnm1.ann1.8XV151 Arachis hypogaea HOM05D003671 ORTHO05D004285 1.4e-295 1019.6 917 65.6
arahy.Tifrunner.gnm1.ann1.616PIC Arachis hypogaea HOM05D003671 ORTHO05D004285 3.2e-295 1018.5 917 65.5
vmacro20357 Vaccinium macrocarpon HOM05D003671 ORTHO05D004285 3.6e-294 1015.0 885 64.6
Glyma.09G277602 Glycine max HOM05D003671 ORTHO05D004285 2.2e-291 1005.7 888 65.0
Lalb_Chr19g0124051 Lupinus albus HOM05D003671 ORTHO05D004285 5.3e-290 1001.1 899 64.5
MSTRG.18954 Avicennia marina HOM05D003671 ORTHO05D004285 1.3e-288 996.5 897 63.1
Psat0s1450g0040 Pisum sativum HOM05D003671 ORTHO05D004285 1.3e-288 996.5 905 63.6
Dinv11386 Davidia involucrata HOM05D003671 ORTHO05D004285 1.7e-288 996.1 775 71.6
VMungo1383G1272 Vigna mungo HOM05D003671 ORTHO05D004285 4.2e-287 991.5 869 65.8
Lalb_Chr03g0043701 Lupinus albus HOM05D003671 ORTHO05D004285 5.5e-287 991.1 902 64.3
Medtr7g072520 Medicago truncatula HOM05D003671 ORTHO05D004285 4.7e-286 988.0 897 63.5
Ca_07746_v3 Cicer arietinum L. HOM05D003671 ORTHO05D004285 6.3e-283 977.6 898 64.1
Rhsim04G0122600 Rhododendron simsii HOM05D003671 ORTHO05D004285 2.9e-280 968.8 900 61.2
Cc06_g00530 Coffea canephora HOM05D003671 ORTHO05D004285 1.5e-279 966.5 882 62.7
Lalb_Chr01g0023661 Lupinus albus HOM05D003671 ORTHO05D004285 4.7e-278 961.4 895 61.9
Nn2g10354 Nelumbo nucifera HOM05D003671 ORTHO05D004285 3.0e-277 958.7 909 60.6
Ca_07750_v3 Cicer arietinum L. HOM05D003671 ORTHO05D004285 1.1e-276 956.8 862 64.3
Migut.J00060 Erythranthe guttata HOM05D003671 ORTHO05D004285 2.3e-269 932.6 901 60.3
Lj1g0001828 Lotus japonicus HOM05D003671 ORTHO05D004285 1.2e-268 930.2 904 62.3
Lj3C942T7 Lonicera japonica HOM05D003671 ORTHO05D004285 2.0e-268 929.5 865 63.5
MBI15_g31431_MAGBIO Magnolia biondii HOM05D003671 ORTHO05D004285 5.7e-268 927.9 909 58.6
TPR.G4424 Trifolium pratense HOM05D003671 ORTHO05D004285 1.4e-266 923.3 901 60.8
MSTRG.5514 Avicennia marina HOM05D003671 ORTHO05D004285 7.0e-266 921.0 897 59.2
Medtr7g072590 Medicago truncatula HOM05D003671 ORTHO05D004285 1.6e-262 909.8 867 60.9
SGA_v2.0_scaffold85G26648 Striga asiatica HOM05D003671 ORTHO05D004285 4.7e-262 908.3 903 58.0
SGA_v2.0_scaffold373G50172 Striga asiatica HOM05D003671 ORTHO05D004285 3.5e-257 892.1 902 59.4
Lalb_Chr07g0190641 Lupinus albus HOM05D003671 ORTHO05D004285 3.3e-255 885.6 903 60.1
Ah.08g209720 Amaranthus hybridus HOM05D003671 ORTHO05D004285 1.5e-252 876.7 906 58.5
THA.LOC104806637 Tarenaya hassleriana HOM05D003671 ORTHO05D004285 2.0e-252 876.3 864 60.6
EL10Ac7g17060 Beta vulgaris HOM05D003671 ORTHO05D004285 3.2e-250 869.0 899 60.0
Nitab4.5_0007794g0010 Nicotiana tabacum HOM05D003671 ORTHO05D004285 4.1e-250 868.6 897 56.2
Nitab4.5_0002348g0020 Nicotiana tabacum HOM05D003671 ORTHO05D004285 5.9e-249 864.8 900 59.7
Peaxi162Scf00595g00423 Petunia axillaris HOM05D003671 ORTHO05D004285 1.9e-247 859.8 882 56.8
Hund03740 Selenicereus undatus HOM05D003671 ORTHO05D004285 4.3e-247 858.6 901 55.2
PGSC0003DMG400013061 Solanum tuberosum HOM05D003671 ORTHO05D004285 1.6e-246 856.7 880 59.0
AUR62029686 Chenopodium quinoa HOM05D003671 ORTHO05D004285 7.5e-244 847.8 875 60.6
CAN.G604.1 Capsicum annuum HOM05D003671 ORTHO05D004285 1.9e-242 843.2 897 54.1
Sopen09g011320 Solanum pennellii HOM05D003671 ORTHO05D004285 7.8e-241 837.8 880 58.3
Solyc09g018310.4 Solanum lycopersicum HOM05D003671 ORTHO05D004285 1.7e-240 836.6 880 58.2
Sc07g0005760 Simmondsia chinensis HOM05D003671 ORTHO05D004285 1.2e-238 830.5 904 57.6
Nitab4.5_0002204g0070 Nicotiana tabacum HOM05D003671 ORTHO05D004285 1.5e-236 823.5 860 57.3
Oeu026963.1 Olea europaea HOM05D003671 ORTHO05D004285 3.2e-234 815.8 862 58.0
Nitab4.5_0000126g0070 Nicotiana tabacum HOM05D003671 ORTHO05D004285 4.1e-234 815.5 865 59.5
CAN.G15.24 Capsicum annuum HOM05D003671 ORTHO05D004285 9.2e-234 814.3 845 58.5
Thhalv10016251m.g Eutrema salsugineum HOM05D003671 ORTHO05D004285 5.6e-231 805.1 899 56.5
Carub.0004s2047 Capsella rubella HOM05D003671 ORTHO05D004285 8.1e-230 801.2 900 56.0
Aa31LG5G23820 Aethionema arabicum HOM05D003671 ORTHO05D004285 2.0e-228 796.6 901 55.9
vmacro08928 Vaccinium macrocarpon HOM05D003671 ORTHO05D004285 3.4e-228 795.8 898 54.1
GSVIVG01030211001 Vitis vinifera HOM05D003671 ORTHO05D004285 5.8e-228 795.0 733 64.1
AT3G51640 Arabidopsis thaliana HOM05D003671 ORTHO05D004285 7.8e-225 784.6 902 54.4
AT3G51650 Arabidopsis thaliana HOM05D003671 ORTHO05D004285 1.2e-222 777.3 902 53.1
DCAR_010961 Daucus carota HOM05D003671 ORTHO05D004285 7.6e-220 768.1 845 54.0
AL4G35770 Arabidopsis lyrata HOM05D003671 ORTHO05D004285 1.3e-219 767.3 884 55.1
Sp4g20820 Schrenkiella parvula HOM05D003671 ORTHO05D004285 5.4e-218 761.9 847 56.0
DCAR_021427 Daucus carota HOM05D003671 ORTHO05D004285 3.5e-217 759.2 846 54.4
ECA247G1347 Erigeron canadensis HOM05D003671 ORTHO05D004285 2.1e-214 750.0 900 53.8
Oeu060440.1 Olea europaea HOM05D003671 ORTHO05D004285 6.2e-214 748.4 845 55.7
Psat3g120920 Pisum sativum HOM05D003671 ORTHO05D004285 6.2e-214 748.4 864 55.1
Aqoxy2G00724 Aquilegia oxysepala HOM05D003671 ORTHO05D004285 5.3e-213 745.3 903 51.6
CARHR133180 Cardamine hirsuta HOM05D003671 ORTHO05D004285 6.9e-213 745.0 882 54.6
AL5G32090 Arabidopsis lyrata HOM05D003671 ORTHO05D004285 4.5e-212 742.3 886 53.3
AUR62006358 Chenopodium quinoa HOM05D003671 ORTHO05D004285 2.4e-210 736.5 806 58.9
BcaB01g00433 Brassica carinata HOM05D003671 ORTHO05D004285 2.1e-206 723.4 881 53.6
PSO339G1890 Papaver somniferum HOM05D003671 ORTHO05D004285 9.0e-205 718.0 906 51.9
PSO384G1707 Papaver somniferum HOM05D003671 ORTHO05D004285 2.6e-204 716.5 906 52.0
BraA09t39938Z Brassica rapa HOM05D003671 ORTHO05D004285 4.5e-204 715.7 881 53.9
Psat3g121000 Pisum sativum HOM05D003671 ORTHO05D004285 1.7e-203 713.8 756 58.3
BcaB01g00498 Brassica carinata HOM05D003671 ORTHO05D004285 5.5e-202 708.8 879 53.1
Oeu060446.2 Olea europaea HOM05D003671 ORTHO05D004285 7.1e-202 708.4 929 50.9
A09p44780 Brassica napus HOM05D003671 ORTHO05D004285 1.0e-200 704.5 867 53.5
BolC8t50300H Brassica oleracea HOM05D003671 ORTHO05D004285 3.9e-200 702.6 879 52.7
BcaB01g00434 Brassica carinata HOM05D003671 ORTHO05D004285 5.6e-199 698.7 900 51.9
C08p26830 Brassica napus HOM05D003671 ORTHO05D004285 5.6e-199 698.7 898 51.7
C08p26840 Brassica napus HOM05D003671 ORTHO05D004285 7.4e-199 698.4 865 53.2
TPR.G4425 Trifolium pratense HOM05D003671 ORTHO05D004285 4.5e-196 689.1 761 57.2
BolC8t50298H Brassica oleracea HOM05D003671 ORTHO05D004285 1.7e-195 687.2 917 51.3
BraA09t39936Z Brassica rapa HOM05D003671 ORTHO05D004285 5.9e-188 662.1 918 50.3
A09p44750 Brassica napus HOM05D003671 ORTHO05D004285 7.6e-188 661.8 915 50.1
MBI03_g38977_MAGBIO Magnolia biondii HOM05D003671 ORTHO05D004285 3.6e-185 652.9 908 48.9
unitig_699.g19370 Utricularia gibba HOM05D003671 ORTHO05D004285 3.0e-184 649.8 873 51.1
CARHR161250 Cardamine hirsuta HOM05D003671 ORTHO05D004285 4.1e-181 639.4 778 52.2
PSO675G2859 Papaver somniferum HOM05D003671 ORTHO05D004285 7.2e-170 602.1 843 49.3
Peaxi162Scf00732g00447 Petunia axillaris HOM05D003671 ORTHO05D004285 8.8e-168 595.1 882 47.7
PSO541G0005 Papaver somniferum HOM05D003671 ORTHO05D004285 1.1e-162 578.2 840 46.2
Lsat_1_v5_gn_8_119680 Lactuca sativa HOM05D003671 ORTHO05D004285 2.8e-158 563.5 750 51.3
ECA236G1062 Erigeron canadensis HOM05D003671 ORTHO05D004285 9.2e-141 505.4 913 43.3
Nn5g26901 Nelumbo nucifera HOM05D003671 ORTHO05D004285 3.6e-137 493.4 638 54.7
HanXRQChr16g0510341 Helianthus annuus HOM05D003671 ORTHO05D004285 2.0e-135 487.6 873 45.1
HPP92_018092 Vanilla planifolia HOM05D003671 ORTHO05D004285 7.5e-135 485.7 916 42.1
Sed0014254 Sechium edule HOM05D003671 ORTHO05D004285 3.2e-133 480.3 453 64.7
HanXRQChr16g0510331 Helianthus annuus HOM05D003671 ORTHO05D004285 1.4e-120 438.3 745 45.1
Zm00001eb195220 Zea mays HOM05D003671 ORTHO05D004285 2.3e-120 437.6 924 40.5
Zm00001eb406310 Zea mays HOM05D003671 ORTHO05D004285 3.1e-120 437.2 924 41.0
SpUn1372_0010 Schrenkiella parvula HOM05D003671 ORTHO05D004285 3.4e-119 433.7 406 64.3
Zm00001eb163960 Zea mays HOM05D003671 ORTHO05D004285 6.4e-118 429.5 922 40.0
CDE07G1826 Ceratophyllum demersum HOM05D003671 ORTHO05D004285 4.7e-113 413.3 899 38.0
CDE04G0380 Ceratophyllum demersum HOM05D003671 ORTHO05D004285 8.4e-110 402.5 791 39.3
Os11g0113200 Oryza sativa ssp. japonica HOM05D003671 ORTHO05D004285 4.1e-109 400.2 927 41.3
Os12g0112600 Oryza sativa ssp. japonica HOM05D003671 ORTHO05D004285 9.2e-109 399.1 921 41.2
HPP92_022854 Vanilla planifolia HOM05D003671 ORTHO05D004654 1.0e-99 369.0 868 39.1
VMungo1383G0904 Vigna mungo HOM05D003671 ORTHO05D004285 4.5e-95 353.6 307 57.7
ATR0012G011 Amborella trichopoda HOM05D003671 ORTHO05D004285 9.9e-87 325.9 949 34.8
SEGI_37069 Sequoiadendron giganteum HOM05D003671 ORTHO05D004285 1.1e-82 312.4 1003 33.4
Oeu060441.1 Olea europaea HOM05D003671 ORTHO05D004285 6.7e-75 286.6 360 46.9
ATR0681G108 Amborella trichopoda HOM05D003671 ORTHO05D004285 5.5e-69 266.9 425 47.1
AagrBONN_evm.TU.Sc2ySwM_344.630 Anthoceros agrestis HOM05D003671 ORTHO05D004285 2.1e-68 265.0 379 48.0
Mapoly0100s0047 Marchantia polymorpha HOM05D003671 ORTHO05D004285 2.5e-66 258.1 359 46.0
Oeu026958.1 Olea europaea HOM05D003671 ORTHO05D004285 9.1e-64 249.6 525 38.7
SEGI_27030 Sequoiadendron giganteum HOM05D003671 ORTHO05D004285 2.0e-63 248.4 294 49.7
SEGI_23390 Sequoiadendron giganteum HOM05D003671 ORTHO05D004285 1.2e-60 239.2 954 33.0
Haze_23239 Corylus avellana HOM05D003671 ORTHO05D004285 3.0e-59 234.6 264 67.4
CAN.G179.38 Capsicum annuum HOM05D003671 ORTHO05D004285 1.7e-57 228.8 258 51.6
Sp5g10620 Schrenkiella parvula HOM05D003671 ORTHO05D004285 2.0e-55 221.9 329 42.6
Pp3c12_1780 Physcomitrium patens HOM05D003671 ORTHO05D004285 1.6e-52 212.2 365 39.2
Sc02g0000840 Simmondsia chinensis HOM05D003671 ORTHO05D004285 7.4e-50 203.4 315 41.9
SEGI_35920 Sequoiadendron giganteum HOM05D003671 ORTHO05D004285 1.6e-44 185.7 176 54.0
TPR.G35754 Trifolium pratense HOM05D003671 ORTHO05D004285 1.5e-42 179.1 97 93.8
SEGI_38845 Sequoiadendron giganteum HOM05D003671 ORTHO05D004285 4.8e-41 174.1 788 27.7
MBI03_g10316_MAGBIO Magnolia biondii HOM05D003671 ORTHO05D004285 4.5e-39 167.5 182 54.9
ATR0681G103 Amborella trichopoda HOM05D003671 ORTHO05D004285 7.3e-21 107.1 163 41.1
unitig_27.g24881 Utricularia gibba HOM05D003671 ORTHO05D004285 3.9e-06 58.2 37 64.9


User provided reference genes

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