Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib151G0133 Durio zibethinus HOM05D007586 ORTHO05D009554 1.0e-38 162.9 81 100.0
Thecc.04G272400 Theobroma cacao HOM05D007586 ORTHO05D009554 7.8e-31 136.7 81 81.5
Gohir.D10G162600 Gossypium hirsutum HOM05D007586 ORTHO05D009554 2.3e-30 135.2 75 85.3
Gorai.011G181700 Gossypium raimondii HOM05D007586 ORTHO05D009554 2.3e-30 135.2 75 85.3
Gohir.A10G105800 Gossypium hirsutum HOM05D007586 ORTHO05D009554 1.5e-29 132.5 75 84.0
COL.COLO4_13963 Corchorus olitorius HOM05D007586 ORTHO05D009554 2.1e-28 128.6 81 76.5
QL06p006198 Quercus lobata HOM05D007586 ORTHO05D009554 3.0e-22 108.2 68 77.9
Manes.03G188100 Manihot esculenta HOM05D007586 ORTHO05D009554 1.9e-21 105.5 78 67.9
Atru.chr4.2702 Acer truncatum HOM05D007586 ORTHO05D009554 1.2e-20 102.8 87 60.9
Haze_01009 Corylus avellana HOM05D007586 ORTHO05D009554 1.6e-20 102.4 59 79.7
Potri.008G198500 Populus trichocarpa HOM05D007586 ORTHO05D009554 1.6e-20 102.4 76 65.8
CsaV3_6G005530 Cucumis sativus L. HOM05D007586 ORTHO05D009554 2.8e-20 101.7 72 66.7
Hma1.2p1_2025F.1_g311520 Hydrangea macrophylla HOM05D007586 ORTHO05D009554 3.6e-20 101.3 67 71.6
Nn4g26123 Nelumbo nucifera HOM05D007586 ORTHO05D009554 3.6e-20 101.3 82 69.5
unitig_749.g14058 Utricularia gibba HOM05D007586 ORTHO05D009554 1.1e-19 99.8 80 65.0
Sabra08G0162000 Salix brachista HOM05D007586 ORTHO05D009554 1.4e-19 99.4 76 65.8
Actinidia00073 Actinidia chinensis HOM05D007586 ORTHO05D009554 2.3e-19 98.6 75 65.3
EL10Ac3g07262 Beta vulgaris HOM05D007586 ORTHO05D009554 3.1e-19 98.2 55 80.0
CSS0032912 Camellia sinensis var. sinensis HOM05D007586 ORTHO05D009554 3.1e-19 98.2 61 73.8
Cfa015540 Carpinus fangiana HOM05D007586 ORTHO05D009554 3.1e-19 98.2 59 76.3
CiPaw.02G089500 Carya illinoinensis HOM05D007586 ORTHO05D009554 3.1e-19 98.2 72 66.7
ClCG06G005620 Citrullus lanatus HOM05D007586 ORTHO05D009554 3.1e-19 98.2 72 63.9
MBI19_g21636_MAGBIO Magnolia biondii HOM05D007586 ORTHO05D009554 3.1e-19 98.2 60 73.3
Sed0005131 Sechium edule HOM05D007586 ORTHO05D009554 3.1e-19 98.2 71 63.4
DCAR_027132 Daucus carota HOM05D007586 ORTHO05D009554 5.2e-19 97.4 69 62.3
Sopen01g032230 Solanum pennellii HOM05D007586 ORTHO05D009554 5.2e-19 97.4 71 67.6
Dinv38351 Davidia involucrata HOM05D007586 ORTHO05D009554 6.8e-19 97.1 82 61.0
PSO832G2949 Papaver somniferum HOM05D007586 ORTHO05D009554 8.9e-19 96.7 74 63.5
Cc03_g02750 Coffea canephora HOM05D007586 ORTHO05D009554 1.2e-18 96.3 61 72.1
PSO210G0926 Papaver somniferum HOM05D007586 ORTHO05D009554 1.2e-18 96.3 74 63.5
Potri.010G028000 Populus trichocarpa HOM05D007586 ORTHO05D009554 1.2e-18 96.3 78 65.4
TAR636G1069 Trochodendron aralioides HOM05D007586 ORTHO05D009554 1.2e-18 96.3 52 86.5
GSVIVG01017851001 Vitis vinifera HOM05D007586 ORTHO05D009554 1.2e-18 96.3 62 69.4
Ah.04g150810 Amaranthus hybridus HOM05D007586 ORTHO05D009554 2.0e-18 95.5 71 64.8
Cpa.g.sc16.72 Carica papaya HOM05D007586 ORTHO05D009554 2.6e-18 95.1 70 70.0
Lalb_Chr18g0055891 Lupinus albus HOM05D007586 ORTHO05D009554 4.4e-18 94.4 77 61.0
Prupe.1G146700 Prunus persica HOM05D007586 ORTHO05D009554 5.8e-18 94.0 76 61.8
BcaB01g05279 Brassica carinata HOM05D007586 ORTHO05D009554 9.8e-18 93.2 77 67.5
C03p10700 Brassica napus HOM05D007586 ORTHO05D009554 9.8e-18 93.2 77 67.5
CARHR194100 Cardamine hirsuta HOM05D007586 ORTHO05D009554 2.9e-17 91.7 63 73.0
Thhalv10015193m.g Eutrema salsugineum HOM05D007586 ORTHO05D009554 3.7e-17 91.3 74 64.9
A03p09170 Brassica napus HOM05D007586 ORTHO05D009554 4.9e-17 90.9 77 66.2
BraA03t10240Z Brassica rapa HOM05D007586 ORTHO05D009554 4.9e-17 90.9 77 66.2
Medtr2g020920 Medicago truncatula HOM05D007586 ORTHO05D009554 4.9e-17 90.9 70 60.0
vmacro15289 Vaccinium macrocarpon HOM05D007586 ORTHO05D009554 4.9e-17 90.9 75 60.0
arahy.Tifrunner.gnm1.ann1.5VHG73 Arachis hypogaea HOM05D007586 ORTHO05D009554 8.3e-17 90.1 69 65.2
THA.LOC104802735 Tarenaya hassleriana HOM05D007586 ORTHO05D009554 8.3e-17 90.1 54 74.1
arahy.Tifrunner.gnm1.ann1.SH255N Arachis hypogaea HOM05D007586 ORTHO05D009554 1.1e-16 89.7 69 63.8
Lj6g0006659 Lotus japonicus HOM05D007586 ORTHO05D009554 1.1e-16 89.7 75 60.0
Sp6g25470 Schrenkiella parvula HOM05D007586 ORTHO05D009554 1.1e-16 89.7 74 64.9
BcaB01g04886 Brassica carinata HOM05D007586 ORTHO05D009554 1.4e-16 89.4 74 64.9
MD13G1177700 Malus domestica HOM05D007586 ORTHO05D009554 1.4e-16 89.4 74 62.2
RcHm_v2.0_Chr4g0420101 Rosa chinensis HOM05D007586 ORTHO05D009554 1.4e-16 89.4 59 72.9
ATR0626G363 Amborella trichopoda HOM05D007586 ORTHO05D009554 3.2e-16 88.2 69 62.3
SalBow2G2177 Salvia bowleyana HOM05D007586 ORTHO05D009554 3.2e-16 88.2 60 66.7
BraA10t44138Z Brassica rapa HOM05D007586 ORTHO05D009554 7.0e-16 87.0 79 60.8
TPR.G18017 Trifolium pratense HOM05D007586 ORTHO05D009554 9.2e-16 86.7 58 63.8
FvH4_4g16650 Fragaria vesca HOM05D007586 ORTHO05D009554 1.2e-15 86.3 80 57.5
FAN12G0362 Fragaria x ananassa HOM05D007586 ORTHO05D009554 1.2e-15 86.3 80 57.5
PGR031G0345 Punica granatum HOM05D007586 ORTHO05D009554 1.2e-15 86.3 49 79.6
Migut.G00284 Erythranthe guttata HOM05D007586 ORTHO05D009554 1.6e-15 85.9 72 58.3
Psat1g185520 Pisum sativum HOM05D007586 ORTHO05D009554 2.7e-15 85.1 67 59.7
COL.COLO4_25734 Corchorus olitorius HOM05D007586 ORTHO05D009554 4.6e-15 84.3 53 73.6
ECA246G1660 Erigeron canadensis HOM05D007586 ORTHO05D009554 4.6e-15 84.3 54 68.5
Glyma.13G212100 Glycine max HOM05D007586 ORTHO05D009554 6.0e-15 84.0 61 62.3
Glyma.15G100600 Glycine max HOM05D007586 ORTHO05D009554 6.0e-15 84.0 76 55.3
Phvul.006G158200 Phaseolus vulgaris HOM05D007586 ORTHO05D009554 6.0e-15 84.0 74 56.8
AUR62018376 Chenopodium quinoa HOM05D000949 ORTHO05D001276 7.8e-15 83.6 58 69.0
TWI09G0380 Tripterygium wilfordii HOM05D007586 ORTHO05D009554 1.0e-14 83.2 83 53.0
Phvul.006G158400 Phaseolus vulgaris HOM05D007586 ORTHO05D009554 1.7e-14 82.4 74 55.4
Zm00001eb349880 Zea mays HOM05D007586 ORTHO05D009554 3.0e-14 81.6 60 61.7
Os05g0404300 Oryza sativa ssp. japonica HOM05D007586 ORTHO05D009554 1.1e-13 79.7 52 73.1
AL6G30270 Arabidopsis lyrata HOM05D007586 ORTHO05D009554 2.5e-13 78.6 44 81.8
Ciclev10006319m.g Citrus clementina HOM05D007586 ORTHO05D009554 2.5e-13 78.6 57 68.4
BcaB08g36636 Brassica carinata HOM05D007586 ORTHO05D009554 3.3e-13 78.2 44 79.5
Carub.0006s1722 Capsella rubella HOM05D007586 ORTHO05D009554 4.3e-13 77.8 74 56.8
COL.COLO4_25738 Corchorus olitorius HOM05D007586 ORTHO05D009554 4.3e-13 77.8 47 78.7
Hma1.2p1_0511F.1_g169220 Hydrangea macrophylla HOM05D000488 ORTHO05D000347 1.2e-12 76.3 53 67.9
AT5G18920 Arabidopsis thaliana HOM05D007586 ORTHO05D009554 2.8e-12 75.1 74 55.4
Aa31LG11G10810 Aethionema arabicum HOM05D007586 ORTHO05D009554 3.6e-12 74.7 53 67.9
arahy.Tifrunner.gnm1.ann1.70FWSL Arachis hypogaea HOM05D007586 ORTHO05D009554 4.7e-12 74.3 79 53.2
BolC3t13546H Brassica oleracea HOM05D007586 ORTHO05D009554 4.7e-12 74.3 64 65.6
Nitab4.5_0009518g0010 Nicotiana tabacum HOM05D007586 ORTHO05D009554 8.1e-12 73.6 54 59.3
SEGI_37206 Sequoiadendron giganteum HOM05D007586 ORTHO05D009554 1.1e-11 73.2 53 54.7
CANSAT01G2672 Cannabis sativa HOM05D007586 ORTHO05D009554 1.8e-11 72.4 61 59.0
Lj3g0017006 Lotus japonicus HOM05D007586 ORTHO05D009554 1.8e-11 72.4 62 56.5
COL.COLO4_25736 Corchorus olitorius HOM05D007586 ORTHO05D009554 3.1e-11 71.6 47 72.3
Nitab4.5_0000201g0230 Nicotiana tabacum HOM05D007586 ORTHO05D009554 4.0e-11 71.2 54 57.4
FAN22G2185 Fragaria x ananassa HOM05D007586 ORTHO05D009554 5.2e-11 70.9 48 70.8
Nitab4.5_0000059g0210 Nicotiana tabacum HOM05D007586 ORTHO05D009554 2.6e-10 68.6 59 55.9
Pp3c2_37920 Physcomitrium patens HOM05D007586 ORTHO05D009554 4.4e-10 67.8 68 47.1
A10p20750 Brassica napus HOM05D007586 ORTHO05D009554 3.7e-09 64.7 65 58.5
Ca_00589_v3 Cicer arietinum L. HOM05D002494 ORTHO05D002673 3.7e-09 64.7 37 73.0
Eucgr.B01188 Eucalyptus grandis HOM05D007586 ORTHO05D009554 1.1e-08 63.2 31 90.3
Medtr2g020940 Medicago truncatula HOM05D007586 ORTHO05D009554 4.1e-08 61.2 51 58.8
Peaxi162Scf00095g00411 Petunia axillaris HOM05D007586 ORTHO05D009554 3.0e-06 55.1 43 62.8


User provided reference genes

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