Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib151G0056 Durio zibethinus HOM05D007575 ORTHO05D009611 0.0e+00 1094.0 566 100.0
Gorai.011G145500 Gossypium raimondii HOM05D007575 ORTHO05D009611 6.9e-227 790.8 568 75.9
Gohir.D10G131800 Gossypium hirsutum HOM05D007575 ORTHO05D009611 3.4e-226 788.5 544 78.1
Gohir.A10G134800 Gossypium hirsutum HOM05D007575 ORTHO05D009611 4.5e-218 761.5 544 76.1
Thecc.04G183800 Theobroma cacao HOM05D007575 ORTHO05D009611 1.4e-214 750.0 540 74.8
Gorai.009G350900 Gossypium raimondii HOM05D007575 ORTHO05D009611 1.9e-200 703.0 542 71.4
Gohir.D05G326300 Gossypium hirsutum HOM05D007575 ORTHO05D009611 1.2e-199 700.3 542 71.2
Gohir.A05G326900 Gossypium hirsutum HOM05D007575 ORTHO05D009611 1.6e-194 683.3 542 70.5
COL.COLO4_24385 Corchorus olitorius HOM05D001792 ORTHO05D001821 2.0e-173 613.2 538 63.9
QL10p045159 Quercus lobata HOM05D007575 ORTHO05D009611 2.7e-146 523.1 544 56.4
Cfa015783 Carpinus fangiana HOM05D007575 ORTHO05D009611 1.3e-145 520.8 540 56.1
Manes.11G115700 Manihot esculenta HOM05D007575 ORTHO05D009611 2.3e-145 520.0 539 55.8
CiPaw.01G103900 Carya illinoinensis HOM05D007575 ORTHO05D009611 2.4e-142 510.0 546 56.2
Haze_00711 Corylus avellana HOM05D007575 ORTHO05D009611 6.8e-142 508.4 544 55.5
Sabra07G0100200 Salix brachista HOM05D007575 ORTHO05D009611 6.2e-135 485.3 540 53.1
Potri.017G036600 Populus trichocarpa HOM05D007575 ORTHO05D009611 8.1e-135 485.0 540 54.4
Prupe.1G189300 Prunus persica HOM05D007575 ORTHO05D009611 2.9e-132 476.5 543 51.4
Ciclev10019508m.g Citrus clementina HOM05D007575 ORTHO05D009611 3.8e-132 476.1 580 51.2
MD04G1038600 Malus domestica HOM05D007575 ORTHO05D009611 1.7e-129 467.2 546 51.1
GSVIVG01013567001 Vitis vinifera HOM05D007575 ORTHO05D009611 3.0e-129 466.5 557 50.8
Atru.chr3.1619 Acer truncatum HOM05D007575 ORTHO05D009611 1.1e-123 448.0 500 53.4
Actinidia39859 Actinidia chinensis HOM05D007575 ORTHO05D009611 1.1e-123 448.0 567 48.9
CSS0031716 Camellia sinensis var. sinensis HOM05D007575 ORTHO05D009611 1.0e-121 441.4 580 48.4
Rhsim09G0032600 Rhododendron simsii HOM05D007575 ORTHO05D009611 1.8e-121 440.7 545 49.5
TAR633G2419 Trochodendron aralioides HOM05D007575 ORTHO05D009611 1.1e-118 431.4 539 50.1
Potri.007G123800 Populus trichocarpa HOM05D007575 ORTHO05D009611 4.5e-117 426.0 473 53.7
CANSAT78G0404 Cannabis sativa HOM05D007575 ORTHO05D009611 5.8e-117 425.6 538 48.1
Sp4g25330 Schrenkiella parvula HOM05D007575 ORTHO05D009611 1.1e-115 421.4 544 48.7
THA.LOC104803562 Tarenaya hassleriana HOM05D007575 ORTHO05D009611 1.9e-115 420.6 555 48.3
RcHm_v2.0_Chr4g0407361 Rosa chinensis HOM05D007575 ORTHO05D009611 2.5e-115 420.2 600 45.7
Oeu050351.1 Olea europaea HOM05D007575 ORTHO05D009611 4.2e-115 419.5 536 49.1
Sabra17G0024000 Salix brachista HOM05D007575 ORTHO05D009611 5.5e-115 419.1 584 47.4
Cc03_g13380 Coffea canephora HOM05D007575 ORTHO05D009611 3.9e-113 412.9 538 48.7
FAN17G1632 Fragaria x ananassa HOM05D007575 ORTHO05D009611 1.1e-112 411.4 597 44.9
Thhalv10001393m.g Eutrema salsugineum HOM05D007575 ORTHO05D009611 3.3e-112 409.8 541 47.9
FvH4_4g11270 Fragaria vesca HOM05D007575 ORTHO05D009611 7.4e-112 408.7 607 44.0
CAN.G710.64 Capsicum annuum HOM05D007575 ORTHO05D009611 9.6e-112 408.3 540 47.4
Aa31LG1G25020 Aethionema arabicum HOM05D007575 ORTHO05D009611 1.8e-110 404.1 543 48.3
FAN07G0850 Fragaria x ananassa HOM05D007575 ORTHO05D009611 3.1e-110 403.3 600 44.3
AL4G41870 Arabidopsis lyrata HOM05D007575 ORTHO05D009611 6.9e-110 402.1 545 47.0
Carub.0004s2568 Capsella rubella HOM05D007575 ORTHO05D009611 2.6e-109 400.2 540 46.7
DCAR_027534 Daucus carota HOM05D007575 ORTHO05D009611 7.6e-109 398.7 543 46.2
PGR083G2249 Punica granatum HOM05D007575 ORTHO05D009611 1.7e-108 397.5 542 46.5
ClCG08G004240 Citrullus lanatus HOM05D007575 ORTHO05D009611 2.9e-108 396.7 544 48.7
AT2G43210 Arabidopsis thaliana HOM05D007575 ORTHO05D009611 6.5e-108 395.6 554 45.5
Nn1g09745 Nelumbo nucifera HOM05D007575 ORTHO05D009611 8.5e-108 395.2 576 44.8
Actinidia11312 Actinidia chinensis HOM05D007575 ORTHO05D009611 1.1e-107 394.8 542 45.8
vmacro00586 Vaccinium macrocarpon HOM05D007575 ORTHO05D009611 7.2e-107 392.1 581 44.2
MELO3C011621.2 Cucumis melo HOM05D007575 ORTHO05D009611 1.6e-106 391.0 556 45.9
Lj6A70T54 Lonicera japonica HOM05D007575 ORTHO05D009611 1.1e-104 384.8 651 42.9
Migut.N00470 Erythranthe guttata HOM05D007575 ORTHO05D009611 1.5e-104 384.4 541 47.0
Eucgr.A00245 Eucalyptus grandis HOM05D007575 ORTHO05D009611 7.4e-104 382.1 550 44.5
SalBow6G5467 Salvia bowleyana HOM05D007575 ORTHO05D009611 1.6e-103 380.9 536 46.3
CsaV3_6G003720 Cucumis sativus L. HOM05D007575 ORTHO05D009611 2.8e-103 380.2 548 46.4
MSTRG.24588 Avicennia marina HOM05D007575 ORTHO05D009611 8.2e-103 378.6 542 46.3
Sopen09g036470 Solanum pennellii HOM05D007575 ORTHO05D009611 2.0e-101 374.0 536 44.8
ECA233G3130 Erigeron canadensis HOM05D007575 ORTHO05D009611 5.9e-101 372.5 538 46.1
HanXRQChr02g0057801 Helianthus annuus HOM05D007575 ORTHO05D009611 2.2e-100 370.5 551 44.5
SGA_v2.0_scaffold406G51053 Striga asiatica HOM05D007575 ORTHO05D009611 2.2e-100 370.5 546 45.6
FAN22G0659 Fragaria x ananassa HOM05D007575 ORTHO05D009611 2.9e-100 370.2 611 42.7
Sed0001943 Sechium edule HOM05D007575 ORTHO05D009611 2.9e-100 370.2 551 45.9
MBI08_g10298_MAGBIO Magnolia biondii HOM05D007575 ORTHO05D009611 1.2e-98 364.8 607 41.0
BraA04t18714Z Brassica rapa HOM05D001811 ORTHO05D001738 1.0e-97 361.7 542 44.3
C04p70190 Brassica napus HOM05D007575 ORTHO05D009611 7.4e-96 355.5 568 43.5
A04p32490 Brassica napus HOM05D007575 ORTHO05D009611 1.4e-94 351.3 589 41.9
Lsat_1_v5_gn_6_54841 Lactuca sativa HOM05D007575 ORTHO05D009611 2.2e-92 344.0 541 42.7
Peaxi162Scf00286g00233 Petunia axillaris HOM05D007575 ORTHO05D009611 2.0e-88 330.9 576 41.7
HPP92_002813 Vanilla planifolia HOM05D007575 ORTHO05D009611 1.8e-81 307.8 531 37.5
Nitab4.5_0001049g0060 Nicotiana tabacum HOM05D007575 ORTHO05D009611 1.5e-80 304.7 466 44.4
Nitab4.5_0004962g0010 Nicotiana tabacum HOM05D007575 ORTHO05D009611 1.7e-79 301.2 470 44.0
unitig_8.g3630 Utricularia gibba HOM05D007575 ORTHO05D009611 6.3e-79 299.3 546 40.5
Solyc09g098550.4 Solanum lycopersicum HOM05D007575 ORTHO05D009611 1.4e-78 298.1 461 43.2
ATR0743G244 Amborella trichopoda HOM05D007575 ORTHO05D009611 1.6e-77 294.7 558 36.4
PSO210G6745 Papaver somniferum HOM05D007575 ORTHO05D009611 4.5e-77 293.1 564 37.1
CARHR138270 Cardamine hirsuta HOM05D007575 ORTHO05D009611 1.0e-76 292.0 465 41.3
Lj6A61T39 Lonicera japonica HOM05D007575 ORTHO05D009611 2.2e-76 290.8 388 50.3
HPP92_002869 Vanilla planifolia HOM05D007575 ORTHO05D009611 3.8e-76 290.0 502 37.8
Os11g0293900 Oryza sativa ssp. japonica HOM05D007575 ORTHO05D009611 1.8e-73 281.2 555 37.5
BcaNung07370 Brassica carinata HOM05D007575 ORTHO05D009611 2.3e-73 280.8 457 42.5
CDE09G0236 Ceratophyllum demersum HOM05D007575 ORTHO05D009611 1.2e-72 278.5 539 37.7
PSO832G0541 Papaver somniferum HOM05D007575 ORTHO05D009611 9.5e-59 232.3 469 36.5
Hma1.2p1_1477F.1_g285910 Hydrangea macrophylla HOM05D007575 ORTHO05D009611 3.0e-44 184.1 425 37.4
Mapoly0164s0007 Marchantia polymorpha HOM05D007575 ORTHO05D009611 1.9e-38 164.9 456 31.8
Pp3c20_2320 Physcomitrium patens HOM05D007575 ORTHO05D009611 7.8e-37 159.5 560 27.5
SEGI_13760 Sequoiadendron giganteum HOM05D007575 ORTHO05D009611 1.5e-35 155.2 409 30.8
TAR633G1182 Trochodendron aralioides HOM05D007575 ORTHO05D009611 1.6e-34 151.8 171 49.1
Zm00001eb198990 Zea mays HOM05D007575 ORTHO05D009611 1.1e-33 149.1 221 40.3
SalBow5G2148 Salvia bowleyana HOM05D007575 ORTHO05D009611 9.9e-32 142.5 173 49.1
SalBow5G4021 Salvia bowleyana HOM05D007575 ORTHO05D009611 9.9e-32 142.5 173 49.1
Eucgr.A00051 Eucalyptus grandis HOM05D007575 ORTHO05D009611 1.7e-31 141.7 172 51.2
BcaB06g29288 Brassica carinata HOM05D007575 ORTHO05D009611 1.4e-30 138.7 128 57.0
CSS0007449 Camellia sinensis var. sinensis HOM05D007575 ORTHO05D009611 7.1e-30 136.3 350 35.1
SMO116G0403 Selaginella moellendorffii HOM05D007575 ORTHO05D009611 6.6e-28 129.8 549 26.2
AagrBONN_evm.TU.Sc2ySwM_344.3290 Anthoceros agrestis HOM05D007575 ORTHO05D009611 5.6e-27 126.7 445 30.1
SEGI_03248 Sequoiadendron giganteum HOM05D007575 ORTHO05D009611 1.3e-23 115.5 175 44.0
Lsat_1_v5_gn_5_138981 Lactuca sativa HOM05D007575 ORTHO05D009611 6.4e-23 113.2 341 30.8
CBR_g123 Chara braunii HOM05D007575 ORTHO05D009611 9.9e-16 89.4 397 25.7
PGSC0003DMG400021612 Solanum tuberosum HOM05D007575 ORTHO05D009611 3.2e-14 84.3 72 62.5
MBI08_g05086_MAGBIO Magnolia biondii HOM05D007575 ORTHO05D009611 1.3e-10 72.4 69 59.4
Gohir.A09G193001 Gossypium hirsutum HOM05D002884 ORTHO05D003178 2.9e-07 61.2 70 40.0
Nn1g01376 Nelumbo nucifera HOM05D002884 ORTHO05D003178 1.1e-06 59.3 87 37.9
MBI04_g00304_MAGBIO Magnolia biondii HOM05D002884 ORTHO05D003178 1.9e-06 58.5 102 35.3
CAN.G981.24 Capsicum annuum HOM05D002884 ORTHO05D003178 2.4e-06 58.2 77 37.7
Sc01g0008750 Simmondsia chinensis HOM05D002884 ORTHO05D003178 2.4e-06 58.2 92 33.7
SGA_v2.0_scaffold144G35971 Striga asiatica HOM05D002884 ORTHO05D003178 3.2e-06 57.8 77 37.7
Lsat_1_v5_gn_3_5420 Lactuca sativa HOM05D002884 ORTHO05D003178 5.5e-06 57.0 112 32.1
CsaV3_3G003750 Cucumis sativus L. HOM05D002884 ORTHO05D003178 7.1e-06 56.6 117 32.5
VMungo1215G1054 Vigna mungo HOM05D002884 ORTHO05D003178 7.1e-06 56.6 70 34.3
MSTRG.12015 Avicennia marina HOM05D002884 ORTHO05D003178 9.3e-06 56.2 70 37.1
CDE04G2022 Ceratophyllum demersum HOM05D002884 ORTHO05D003178 9.3e-06 56.2 101 32.7
Gohir.D09G187200 Gossypium hirsutum HOM05D002884 ORTHO05D003178 9.3e-06 56.2 70 37.1
Gorai.006G210000 Gossypium raimondii HOM05D002884 ORTHO05D003178 9.3e-06 56.2 70 37.1
Sc22g0000260 Simmondsia chinensis HOM05D002884 ORTHO05D003178 9.3e-06 56.2 96 31.2


User provided reference genes

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