Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib150G1607 Durio zibethinus HOM05D005314 ORTHO05D006522 7.5e-161 570.5 291 100.0
Thecc.09G057100 Theobroma cacao HOM05D005314 ORTHO05D006522 3.9e-117 425.2 222 96.4
Gohir.A13G187700 Gossypium hirsutum HOM05D005314 ORTHO05D006522 9.0e-114 414.1 222 94.1
Gorai.013G220600 Gossypium raimondii HOM05D005314 ORTHO05D006522 9.0e-114 414.1 222 94.1
Gohir.D13G194600 Gossypium hirsutum HOM05D005314 ORTHO05D006522 2.0e-113 412.9 222 93.7
COL.COLO4_21084 Corchorus olitorius HOM05D005314 ORTHO05D006522 4.5e-113 411.8 222 95.0
Gohir.A07G021950 Gossypium hirsutum HOM05D005314 ORTHO05D006522 4.5e-113 411.8 222 93.7
Gorai.001G022500 Gossypium raimondii HOM05D005314 ORTHO05D006522 4.5e-113 411.8 222 93.7
TWI34G0632 Tripterygium wilfordii HOM05D005314 ORTHO05D006522 1.6e-110 403.3 222 88.7
CANSAT25G2280 Cannabis sativa HOM05D005314 ORTHO05D006522 1.8e-109 399.8 222 87.8
TWI32G0330 Tripterygium wilfordii HOM05D005314 ORTHO05D006522 3.0e-109 399.1 222 87.8
Atru.chr7.1939 Acer truncatum HOM05D005314 ORTHO05D006522 8.8e-109 397.5 222 89.2
Manes.03G050000 Manihot esculenta HOM05D005314 ORTHO05D006522 2.0e-108 396.4 222 88.3
Potri.018G060500 Populus trichocarpa HOM05D005314 ORTHO05D006522 5.7e-108 394.8 222 87.4
Cfa017974 Carpinus fangiana HOM05D005314 ORTHO05D006522 2.2e-107 392.9 222 87.4
Haze_18156 Corylus avellana HOM05D005314 ORTHO05D006522 2.8e-107 392.5 222 86.9
Potri.006G226000 Populus trichocarpa HOM05D005314 ORTHO05D006522 8.2e-107 391.0 222 87.8
QL02p000736 Quercus lobata HOM05D005314 ORTHO05D006522 8.2e-107 391.0 222 86.5
Sp6g31630 Schrenkiella parvula HOM05D005314 ORTHO05D006522 1.4e-106 390.2 222 87.8
THA.LOC104811236 Tarenaya hassleriana HOM05D005314 ORTHO05D006522 1.5e-105 386.7 222 86.5
BcaNung02637 Brassica carinata HOM05D005314 ORTHO05D006522 2.0e-105 386.3 222 86.0
MD15G1056700 Malus domestica HOM05D005314 ORTHO05D006522 2.0e-105 386.3 222 85.6
Thhalv10014010m.g Eutrema salsugineum HOM05D005314 ORTHO05D006522 2.6e-105 386.0 222 86.9
AL6G22740 Arabidopsis lyrata HOM05D005314 ORTHO05D006522 3.4e-105 385.6 222 86.9
Carub.0006s1050 Capsella rubella HOM05D005314 ORTHO05D006522 3.4e-105 385.6 222 86.9
A10p25800 Brassica napus HOM05D005314 ORTHO05D006522 5.9e-105 384.8 222 86.0
C09p64870 Brassica napus HOM05D005314 ORTHO05D006522 5.9e-105 384.8 222 86.0
BolC9t59318H Brassica oleracea HOM05D005314 ORTHO05D006522 5.9e-105 384.8 222 86.0
FvH4_2g31600 Fragaria vesca HOM05D005314 ORTHO05D006522 7.7e-105 384.4 222 85.1
CiPaw.15G037000 Carya illinoinensis HOM05D005314 ORTHO05D006522 1.3e-104 383.6 222 85.1
Prupe.1G409300 Prunus persica HOM05D005314 ORTHO05D006522 1.7e-104 383.3 222 84.7
PGR044G2019 Punica granatum HOM05D005314 ORTHO05D006522 1.7e-104 383.3 222 84.7
AT5G11960 Arabidopsis thaliana HOM05D005314 ORTHO05D006522 2.9e-104 382.5 222 86.0
Phvul.009G078900 Phaseolus vulgaris HOM05D005314 ORTHO05D006522 2.9e-104 382.5 222 82.4
Actinidia30326 Actinidia chinensis HOM05D005314 ORTHO05D006522 3.8e-104 382.1 222 85.1
MELO3C016882.2 Cucumis melo HOM05D005314 ORTHO05D006522 1.1e-103 380.6 222 82.4
CsaV3_4G035770 Cucumis sativus L. HOM05D005314 ORTHO05D006522 1.1e-103 380.6 222 82.4
RcHm_v2.0_Chr6g0311221 Rosa chinensis HOM05D005314 ORTHO05D006522 1.1e-103 380.6 222 84.2
BcaC03g13403 Brassica carinata HOM05D005314 ORTHO05D006522 1.9e-103 379.8 222 85.1
A02p01290 Brassica napus HOM05D005314 ORTHO05D006522 1.9e-103 379.8 222 85.1
C02p05500 Brassica napus HOM05D005314 ORTHO05D006522 1.9e-103 379.8 222 85.1
BolC2t06496H Brassica oleracea HOM05D005314 ORTHO05D006522 1.9e-103 379.8 222 85.1
BraA02t05108Z Brassica rapa HOM05D005314 ORTHO05D006522 1.9e-103 379.8 222 85.1
Lalb_Chr14g0366381 Lupinus albus HOM05D005314 ORTHO05D006522 1.9e-103 379.8 222 82.4
ClCG05G017990 Citrullus lanatus HOM05D005314 ORTHO05D006522 2.5e-103 379.4 222 82.0
CiPaw.16G027100 Carya illinoinensis HOM05D005314 ORTHO05D006522 3.2e-103 379.0 222 83.8
MD08G1064900 Malus domestica HOM05D005314 ORTHO05D006522 3.2e-103 379.0 222 84.2
CSS0005464 Camellia sinensis var. sinensis HOM05D005314 ORTHO05D006522 4.2e-103 378.6 222 83.8
Dinv28005 Davidia involucrata HOM05D005314 ORTHO05D006522 5.5e-103 378.3 223 83.9
Lalb_Chr11g0063171 Lupinus albus HOM05D005314 ORTHO05D006522 7.2e-103 377.9 222 80.6
Ciclev10008891m.g Citrus clementina HOM05D005314 ORTHO05D006522 9.4e-103 377.5 214 86.9
TAR369G0158 Trochodendron aralioides HOM05D005314 ORTHO05D006522 9.4e-103 377.5 222 83.8
TAR636G1106 Trochodendron aralioides HOM05D005314 ORTHO05D006522 9.4e-103 377.5 222 83.8
Glyma.06G053100 Glycine max HOM05D005314 ORTHO05D006522 1.2e-102 377.1 222 82.0
Sed0001440 Sechium edule HOM05D005314 ORTHO05D006522 2.1e-102 376.3 222 82.0
BraA10t44644Z Brassica rapa HOM05D005314 ORTHO05D006522 2.7e-102 375.9 234 81.6
Dinv22878 Davidia involucrata HOM05D005314 ORTHO05D006522 2.7e-102 375.9 222 83.8
Migut.A00114 Erythranthe guttata HOM05D005314 ORTHO05D006522 2.7e-102 375.9 222 82.4
Eucgr.C03058 Eucalyptus grandis HOM05D005314 ORTHO05D006522 2.7e-102 375.9 222 82.9
Lalb_Chr22g0356141 Lupinus albus HOM05D005314 ORTHO05D006522 2.7e-102 375.9 222 82.4
ECA233G4949 Erigeron canadensis HOM05D005314 ORTHO05D006522 1.4e-101 373.6 222 84.7
Aa31LG3G15270 Aethionema arabicum HOM05D005314 ORTHO05D006522 1.8e-101 373.2 234 81.6
PSO210G6321 Papaver somniferum HOM05D005314 ORTHO05D006522 2.3e-101 372.9 222 82.0
PSO210G6435 Papaver somniferum HOM05D005314 ORTHO05D006522 2.3e-101 372.9 222 82.0
Gohir.D07G021900 Gossypium hirsutum HOM05D005314 ORTHO05D006522 3.0e-101 372.5 206 92.7
Medtr1g015820 Medicago truncatula HOM05D005314 ORTHO05D006522 8.8e-101 370.9 223 82.5
Nn8g38796 Nelumbo nucifera HOM05D005314 ORTHO05D006522 8.8e-101 370.9 227 81.1
Ca_13152_v3 Cicer arietinum L. HOM05D005314 ORTHO05D006522 1.1e-100 370.5 222 80.6
Glyma.14G097400 Glycine max HOM05D005314 ORTHO05D006522 1.5e-100 370.2 228 78.9
AUR62009122 Chenopodium quinoa HOM05D005314 ORTHO05D006522 2.0e-100 369.8 222 80.6
GSVIVG01035376001 Vitis vinifera HOM05D005314 ORTHO05D006522 2.0e-100 369.8 222 82.4
Peaxi162Scf01088g00005 Petunia axillaris HOM05D005314 ORTHO05D006522 2.6e-100 369.4 222 81.1
Psat6g021480 Pisum sativum HOM05D005314 ORTHO05D006522 2.6e-100 369.4 223 82.1
TPR.G13039 Trifolium pratense HOM05D005314 ORTHO05D006522 2.6e-100 369.4 223 81.6
Hund19438 Selenicereus undatus HOM05D005314 ORTHO05D006522 4.4e-100 368.6 222 80.6
Lj1g0000731 Lotus japonicus HOM05D005314 ORTHO05D006522 5.7e-100 368.2 222 79.7
MSTRG.25961 Avicennia marina HOM05D005314 ORTHO05D006522 1.3e-99 367.1 222 80.2
CAN.G130.11 Capsicum annuum HOM05D005314 ORTHO05D006522 1.3e-99 367.1 222 81.1
Solyc06g036780.3 Solanum lycopersicum HOM05D005314 ORTHO05D006522 2.8e-99 365.9 222 80.6
SalBow4G3021 Salvia bowleyana HOM05D005314 ORTHO05D006522 3.7e-99 365.5 222 82.0
Phvul.001G037500 Phaseolus vulgaris HOM05D005314 ORTHO05D006522 4.8e-99 365.2 222 79.3
Sopen06g012940 Solanum pennellii HOM05D005314 ORTHO05D006522 6.3e-99 364.8 222 80.2
HanXRQChr08g0226511 Helianthus annuus HOM05D005314 ORTHO05D006522 4.1e-98 362.1 222 81.5
Aqoxy7G04033 Aquilegia oxysepala HOM05D000411 ORTHO05D006522 7.0e-98 361.3 222 81.5
Cc08_g10890 Coffea canephora HOM05D005314 ORTHO05D006522 1.5e-97 360.1 222 77.5
Hma1.2p1_0544F.1_g175630 Hydrangea macrophylla HOM05D005314 ORTHO05D006522 1.5e-97 360.1 222 81.1
Lsat_1_v5_gn_6_14601 Lactuca sativa HOM05D005314 ORTHO05D006522 2.6e-97 359.4 222 82.0
FAN27G1630 Fragaria x ananassa HOM05D005314 ORTHO05D006522 7.7e-97 357.8 222 80.6
CDE06G1634 Ceratophyllum demersum HOM05D005314 ORTHO05D006522 1.3e-96 357.1 222 78.4
VMungo0647G2045 Vigna mungo HOM05D005314 ORTHO05D006522 1.3e-96 357.1 235 75.3
ATR0789G137 Amborella trichopoda HOM05D005314 ORTHO05D006522 1.7e-96 356.7 222 78.4
SGA_v2.0_scaffold20G09204 Striga asiatica HOM05D005314 ORTHO05D006522 3.2e-95 352.4 269 68.4
Rhsim11G0042200 Rhododendron simsii HOM05D005314 ORTHO05D006522 8.0e-94 347.8 244 73.8
Sabra18G0054400 Salix brachista HOM05D005314 ORTHO05D006522 1.0e-93 347.4 292 65.1
VMungo1309G2963 Vigna mungo HOM05D005314 ORTHO05D006522 1.0e-93 347.4 222 76.6
Oeu003996.1 Olea europaea HOM05D005314 ORTHO05D006522 1.1e-87 327.4 260 68.5
HPP92_007653 Vanilla planifolia HOM05D005314 ORTHO05D006522 1.5e-87 327.0 222 72.1
MBI01_g21122_MAGBIO Magnolia biondii HOM05D005314 ORTHO05D006522 4.7e-86 322.0 196 80.1
FAN15G2750 Fragaria x ananassa HOM05D005314 ORTHO05D006522 5.2e-85 318.5 190 82.1
FAN24G2134 Fragaria x ananassa HOM05D005314 ORTHO05D006522 2.0e-84 316.6 185 83.2
Glyma.04G052700 Glycine max HOM05D005314 ORTHO05D006522 1.7e-83 313.5 185 82.2
arahy.Tifrunner.gnm1.ann1.VQ1HGR Arachis hypogaea HOM05D005314 ORTHO05D006522 2.4e-82 309.7 222 72.5
Sabra06G0174700 Salix brachista HOM05D005314 ORTHO05D006522 1.6e-81 307.0 223 71.7
Glyma.17G227100 Glycine max HOM05D005314 ORTHO05D006522 1.7e-80 303.5 222 67.6
arahy.Tifrunner.gnm1.ann1.UTD444 Arachis hypogaea HOM05D005314 ORTHO05D006522 3.0e-77 292.7 222 66.7
MD11G1243300 Malus domestica HOM05D005314 ORTHO05D006522 1.7e-75 287.0 169 84.0
Sc23g0005690 Simmondsia chinensis HOM05D005314 ORTHO05D006522 6.3e-75 285.0 222 65.8
DCAR_007733 Daucus carota HOM05D005314 ORTHO05D006522 8.3e-75 284.6 279 57.0
Lj8A530G14 Lonicera japonica HOM05D005314 ORTHO05D006522 8.3e-75 284.6 169 82.8
arahy.Tifrunner.gnm1.ann1.GAY7D4 Arachis hypogaea HOM05D005314 ORTHO05D006522 2.4e-74 283.1 222 65.3
EL10Ac2g03829 Beta vulgaris HOM05D005314 ORTHO05D006522 7.7e-73 278.1 164 84.1
unitig_88.g27677 Utricularia gibba HOM05D005314 ORTHO05D006522 7.8e-65 251.5 263 50.6
vmacro00123 Vaccinium macrocarpon HOM05D005314 ORTHO05D006522 7.8e-65 251.5 169 74.6
Nitab4.5_0000972g0030 Nicotiana tabacum HOM05D005314 ORTHO05D006522 2.0e-57 226.9 140 82.1
Cpa.g.sc7.160 Carica papaya HOM05D005314 ORTHO05D006522 1.7e-56 223.8 144 81.9
arahy.Tifrunner.gnm1.ann1.6D5JL1 Arachis hypogaea HOM05D005314 ORTHO05D006522 1.6e-54 217.2 222 54.5
Os01g0708300 Oryza sativa ssp. japonica HOM05D005314 ORTHO05D006522 3.6e-54 216.1 144 70.8
Mapoly0049s0128 Marchantia polymorpha HOM05D005314 ORTHO05D006522 8.9e-53 211.5 232 47.4
Sed0024799 Sechium edule HOM05D005314 ORTHO05D006522 2.0e-52 210.3 126 77.8
RcHm_v2.0_Chr1g0383701 Rosa chinensis HOM05D005314 ORTHO05D006522 3.5e-49 199.5 192 56.2
AUR62039137 Chenopodium quinoa HOM05D005314 ORTHO05D006522 1.1e-45 188.0 131 74.0
Pp3c7_50 Physcomitrium patens HOM05D005314 ORTHO05D006522 2.4e-42 176.8 195 45.1
Zm00001eb155260 Zea mays HOM05D005314 ORTHO05D006522 2.8e-38 163.3 126 62.7
Nitab4.5_0000268g0140 Nicotiana tabacum HOM05D005314 ORTHO05D006522 2.4e-37 160.2 222 43.7
Hund03325 Selenicereus undatus HOM05D005314 ORTHO05D006522 2.4e-37 160.2 152 53.9
Ah.10g034130 Amaranthus hybridus HOM05D005314 ORTHO05D006522 9.3e-34 148.3 126 62.7
Lj7A260G18 Lonicera japonica HOM05D005314 ORTHO05D006522 1.2e-33 147.9 171 49.1
CARHR201170 Cardamine hirsuta HOM05D005314 ORTHO05D006522 2.5e-31 140.2 79 86.1
BcaB03g16563 Brassica carinata HOM05D005314 ORTHO05D006522 7.3e-31 138.7 113 66.4
Oeu040341.1 Olea europaea HOM05D005314 ORTHO05D006522 4.9e-27 125.9 74 85.1
PRCOL_00001271 Prasinoderma coloniale HOM05D005314 ORTHO05D006522 1.0e-24 118.2 274 31.0
CBR_g50008 Chara braunii HOM05D005314 ORTHO05D006522 5.1e-24 115.9 268 30.2
Cre10.g419700 Chlamydomonas reinhardtii HOM05D005314 ORTHO05D006522 1.1e-23 114.8 268 29.9
MCO12G408 Micromonas commoda HOM05D005314 ORTHO05D006522 3.3e-23 113.2 247 32.0
CSS0003098 Camellia sinensis var. sinensis HOM05D005314 ORTHO05D006522 2.4e-21 107.1 60 81.7
SEGI_34785 Sequoiadendron giganteum HOM05D005314 ORTHO05D006522 1.5e-20 104.4 73 69.9
Cpa.g.sc7.159 Carica papaya HOM05D005314 ORTHO05D006522 1.0e-11 75.1 42 76.2
MD01G1007700 Malus domestica HOM05D005314 ORTHO05D246798 2.8e-06 57.0 38 73.7


User provided reference genes

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