Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib150G1024 Durio zibethinus HOM05D002816 ORTHO05D005633 9.6e-59 229.9 116 100.0
Gohir.D05G070300 Gossypium hirsutum HOM05D002816 ORTHO05D005633 1.7e-31 139.4 76 88.2
Gorai.009G071300 Gossypium raimondii HOM05D002816 ORTHO05D005633 1.7e-31 139.4 76 88.2
Thecc.09G223700 Theobroma cacao HOM05D002816 ORTHO05D005633 1.7e-31 139.4 76 88.2
Gohir.A05G067400 Gossypium hirsutum HOM05D002816 ORTHO05D005633 6.5e-31 137.5 76 86.8
TWI75G1088 Tripterygium wilfordii HOM05D002816 ORTHO05D005633 6.5e-31 137.5 76 86.8
Cpa.g.sc84.106 Carica papaya HOM05D002816 ORTHO05D005633 1.5e-30 136.3 76 85.5
HanXRQChr07g0196931 Helianthus annuus HOM05D002816 ORTHO05D005633 3.2e-30 135.2 76 84.2
COL.COLO4_09898 Corchorus olitorius HOM05D002816 ORTHO05D005633 5.5e-30 134.4 76 84.2
Actinidia39380 Actinidia chinensis HOM05D002816 ORTHO05D005633 7.2e-30 134.0 76 84.2
Cfa009698 Carpinus fangiana HOM05D002816 ORTHO05D005633 7.2e-30 134.0 76 82.9
Prupe.6G018300 Prunus persica HOM05D002816 ORTHO05D005633 7.2e-30 134.0 76 82.9
Manes.14G014200 Manihot esculenta HOM05D002816 ORTHO05D005633 9.4e-30 133.7 76 85.5
Ciclev10017962m.g Citrus clementina HOM05D002816 ORTHO05D005633 1.6e-29 132.9 76 81.6
Lju1319A3T41 Lonicera japonica HOM05D002816 ORTHO05D005633 2.1e-29 132.5 76 80.3
Potri.003G210600 Populus trichocarpa HOM05D002816 ORTHO05D005633 2.1e-29 132.5 76 81.6
Potri.003G210701 Populus trichocarpa HOM05D002816 ORTHO05D005633 2.1e-29 132.5 76 81.6
Potri.T085701 Populus trichocarpa HOM05D002816 ORTHO05D005633 2.1e-29 132.5 76 81.6
CiPaw.13G165300 Carya illinoinensis HOM05D002816 ORTHO05D005633 4.7e-29 131.3 76 80.3
PGR119G2184 Punica granatum HOM05D002816 ORTHO05D005633 4.7e-29 131.3 76 80.3
Hma1.2p1_2304F.1_g319340 Hydrangea macrophylla HOM05D002816 ORTHO05D005633 6.1e-29 131.0 76 81.6
Cc01_g04160 Coffea canephora HOM05D002816 ORTHO05D005633 8.0e-29 130.6 76 81.6
CANSAT54G2844 Cannabis sativa HOM05D002816 ORTHO05D005633 1.4e-28 129.8 76 80.3
VMungo1127G0859 Vigna mungo HOM05D002816 ORTHO05D005633 1.4e-28 129.8 76 81.6
FvH4_3g43570 Fragaria vesca HOM05D002816 ORTHO05D005633 2.3e-28 129.0 76 77.6
FAN21G1421 Fragaria x ananassa HOM05D002816 ORTHO05D005633 2.3e-28 129.0 76 77.6
Haze_23048 Corylus avellana HOM05D002816 ORTHO05D005633 3.0e-28 128.6 76 78.9
QL01p006152 Quercus lobata HOM05D002816 ORTHO05D005633 3.0e-28 128.6 76 80.3
RcHm_v2.0_Chr5g0078141 Rosa chinensis HOM05D002816 ORTHO05D005633 3.0e-28 128.6 76 78.9
FAN16G1696 Fragaria x ananassa HOM05D002816 ORTHO05D005633 3.9e-28 128.3 76 76.3
VMungo1080G0972 Vigna mungo HOM05D002816 ORTHO05D005633 3.9e-28 128.3 81 75.3
Atru.chr3.2512 Acer truncatum HOM05D002816 ORTHO05D005633 5.2e-28 127.9 76 80.3
DCAR_023760 Daucus carota HOM05D002816 ORTHO05D005633 5.2e-28 127.9 76 78.9
MD11G1022500 Malus domestica HOM05D002816 ORTHO05D005633 5.2e-28 127.9 76 81.6
PGR119G0739 Punica granatum HOM05D002816 ORTHO05D005633 5.2e-28 127.9 76 80.3
arahy.Tifrunner.gnm1.ann1.4LCW9K Arachis hypogaea HOM05D002816 ORTHO05D005633 6.7e-28 127.5 76 77.6
TAR163G0001 Trochodendron aralioides HOM05D002816 ORTHO05D005633 6.7e-28 127.5 76 80.3
arahy.Tifrunner.gnm1.ann1.YK6NC6 Arachis hypogaea HOM05D002816 ORTHO05D005633 8.8e-28 127.1 76 77.6
Dinv36301 Davidia involucrata HOM05D002816 ORTHO05D005633 8.8e-28 127.1 76 80.3
TPR.G13661 Trifolium pratense HOM05D004419 ORTHO05D005633 1.1e-27 126.7 76 77.6
CAN.G388.65 Capsicum annuum HOM05D002816 ORTHO05D005633 1.5e-27 126.3 80 75.0
FAN25G1910 Fragaria x ananassa HOM05D002816 ORTHO05D005633 1.5e-27 126.3 76 76.3
Glyma.13G342600 Glycine max HOM05D002816 ORTHO05D005633 2.0e-27 125.9 76 76.3
MD03G1020900 Malus domestica HOM05D002816 ORTHO05D005633 2.0e-27 125.9 76 81.6
TPR.G18840 Trifolium pratense HOM05D002816 ORTHO05D005633 2.0e-27 125.9 76 77.6
arahy.Tifrunner.gnm1.ann1.S74NHW Arachis hypogaea HOM05D002816 ORTHO05D005633 2.6e-27 125.6 76 76.3
CSS0023415 Camellia sinensis var. sinensis HOM05D002816 ORTHO05D005633 3.3e-27 125.2 76 77.6
Phvul.011G056700 Phaseolus vulgaris HOM05D002816 ORTHO05D005633 3.3e-27 125.2 76 77.6
CSS0015622 Camellia sinensis var. sinensis HOM05D002816 ORTHO05D005633 4.4e-27 124.8 76 77.6
Migut.D00561 Erythranthe guttata HOM05D002816 ORTHO05D005633 4.4e-27 124.8 76 73.7
Solyc01g006640.1 Solanum lycopersicum HOM05D002816 ORTHO05D005633 4.4e-27 124.8 76 77.6
Sopen01g002630 Solanum pennellii HOM05D002816 ORTHO05D005633 4.4e-27 124.8 76 77.6
CSS0039119 Camellia sinensis var. sinensis HOM05D002816 ORTHO05D005633 5.7e-27 124.4 76 73.7
CSS0044925 Camellia sinensis var. sinensis HOM05D002816 ORTHO05D005633 5.7e-27 124.4 76 77.6
Lj3g0016219 Lotus japonicus HOM05D002816 ORTHO05D005633 5.7e-27 124.4 76 77.6
Nitab4.5_0003796g0070 Nicotiana tabacum HOM05D002816 ORTHO05D005633 5.7e-27 124.4 76 77.6
Psat7g213680 Pisum sativum HOM05D002816 ORTHO05D005633 5.7e-27 124.4 76 76.3
Actinidia16294 Actinidia chinensis HOM05D002816 ORTHO05D005633 7.4e-27 124.0 76 72.4
MELO3C014642.2 Cucumis melo HOM05D002816 ORTHO05D005633 7.4e-27 124.0 76 77.6
arahy.Tifrunner.gnm1.ann1.D5VX0F Arachis hypogaea HOM05D002816 ORTHO05D005633 9.7e-27 123.6 76 75.0
MBI04_g14278_MAGBIO Magnolia biondii HOM05D002816 ORTHO05D005633 9.7e-27 123.6 76 73.7
MBI04_g27134_MAGBIO Magnolia biondii HOM05D002816 ORTHO05D005633 9.7e-27 123.6 76 73.7
Ca_20583_v3 Cicer arietinum L. HOM05D002816 ORTHO05D005633 1.3e-26 123.2 76 75.0
PGSC0003DMG400021382 Solanum tuberosum HOM05D002816 ORTHO05D005633 1.7e-26 122.9 76 75.0
MBI04_g27132_MAGBIO Magnolia biondii HOM05D002816 ORTHO05D005633 2.2e-26 122.5 76 72.4
Oeu014059.1 Olea europaea HOM05D002816 ORTHO05D005633 2.2e-26 122.5 76 76.3
ECA233G1587 Erigeron canadensis HOM05D002816 ORTHO05D005633 4.8e-26 121.3 83 65.1
Actinidia06320 Actinidia chinensis HOM05D002816 ORTHO05D005633 1.4e-25 119.8 68 85.3
Zm00001eb079870 Zea mays HOM05D002816 ORTHO05D005633 1.8e-25 119.4 76 71.1
ECA233G2205 Erigeron canadensis HOM05D002816 ORTHO05D005633 2.4e-25 119.0 76 68.4
Lalb_Chr03g0026201 Lupinus albus HOM05D002816 ORTHO05D005633 2.4e-25 119.0 80 71.2
Sed0025537 Sechium edule HOM05D002816 ORTHO05D005633 4.1e-25 118.2 76 76.3
Lsat_1_v5_gn_2_101081 Lactuca sativa HOM05D002816 ORTHO05D005633 5.3e-25 117.9 73 75.3
ClCG02G023650 Citrullus lanatus HOM05D002816 ORTHO05D005633 9.1e-25 117.1 82 73.2
Glyma.11G130450 Glycine max HOM05D002816 ORTHO05D005633 9.1e-25 117.1 76 72.4
ATR0605G130 Amborella trichopoda HOM05D002816 ORTHO05D005633 2.0e-24 115.9 76 68.4
Migut.N02292 Erythranthe guttata HOM05D002816 ORTHO05D005633 3.5e-24 115.2 76 68.4
DCAR_029714 Daucus carota HOM05D002816 ORTHO05D005633 5.9e-24 114.4 76 67.1
Lsat_1_v5_gn_6_50161 Lactuca sativa HOM05D002816 ORTHO05D005633 7.7e-24 114.0 76 68.4
SalBow5G4185 Salvia bowleyana HOM05D002816 ORTHO05D005633 1.0e-23 113.6 76 65.8
CAN.G388.66 Capsicum annuum HOM05D002816 ORTHO05D005633 2.9e-23 112.1 76 69.7
Lsat_1_v5_gn_6_50280 Lactuca sativa HOM05D002816 ORTHO05D005633 3.8e-23 111.7 76 67.1
Nitab4.5_0009808g0040 Nicotiana tabacum HOM05D002816 ORTHO05D005633 1.1e-22 110.2 68 77.9
Sopen01g002590 Solanum pennellii HOM05D002816 ORTHO05D005633 1.5e-22 109.8 76 67.1
Cc01_g04100 Coffea canephora HOM05D002816 ORTHO05D005633 1.6e-21 106.3 76 63.2
Peaxi162Scf00559g00421 Petunia axillaris HOM05D002816 ORTHO05D005633 1.6e-21 106.3 68 75.0
ECA238G3506 Erigeron canadensis HOM05D002816 ORTHO05D005633 2.1e-21 105.9 67 77.6
HanXRQChr02g0056791 Helianthus annuus HOM05D002816 ORTHO05D005633 6.8e-20 100.9 76 52.6
SEGI_27256 Sequoiadendron giganteum HOM05D002816 ORTHO05D005633 3.7e-18 95.1 95 49.5
SMO115G0335 Selaginella moellendorffii HOM05D002816 ORTHO05D005633 1.8e-17 92.8 92 48.9
Lj1A364T31 Lonicera japonica HOM05D002816 ORTHO05D005633 5.0e-15 84.7 55 72.7
SEGI_13421 Sequoiadendron giganteum HOM05D002816 ORTHO05D005633 4.2e-14 81.6 60 65.0
SEGI_08242 Sequoiadendron giganteum HOM05D002816 ORTHO05D005633 5.5e-14 81.3 60 63.3
GSVIVG01025332001 Vitis vinifera HOM05D002816 ORTHO05D005633 8.0e-13 77.4 45 82.2
AagrBONN_evm.TU.Sc2ySwM_344.2597 Anthoceros agrestis HOM05D002816 ORTHO05D005633 4.4e-11 71.6 77 44.2
Mapoly0023s0010 Marchantia polymorpha HOM05D002816 ORTHO05D005633 9.8e-11 70.5 76 42.1
Aqoxy1G00177 Aquilegia oxysepala HOM05D002816 ORTHO05D005633 2.8e-10 68.9 45 68.9
Medtr4g066130 Medicago truncatula HOM05D002816 ORTHO05D005633 2.8e-10 68.9 76 48.7
Medtr2g098490 Medicago truncatula HOM05D002816 ORTHO05D005633 3.7e-10 68.6 76 50.0
Eucgr.J00812 Eucalyptus grandis HOM05D002816 ORTHO05D005633 6.3e-10 67.8 76 50.0
Os04g0473900 Oryza sativa ssp. japonica HOM05D002816 ORTHO05D005633 3.1e-09 65.5 76 44.7
Eucgr.J00810 Eucalyptus grandis HOM05D002816 ORTHO05D005633 4.1e-09 65.1 76 47.4
Eucgr.J00816 Eucalyptus grandis HOM05D002816 ORTHO05D005633 2.7e-08 62.4 76 46.1
Glyma.15G031700 Glycine max HOM05D002816 ORTHO05D005633 5.9e-08 61.2 36 75.0
AagrBONN_evm.TU.Sc2ySwM_344.2583 Anthoceros agrestis HOM05D002816 ORTHO05D005633 7.7e-08 60.8 79 39.2


User provided reference genes

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