Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib150G0770 Durio zibethinus HOM05D005647 ORTHO05D006968 0.0e+00 1464.5 770 100.0
Thecc.09G331200 Theobroma cacao HOM05D005647 ORTHO05D006968 9.8e-309 1063.1 769 75.8
COL.COLO4_18417 Corchorus olitorius HOM05D005647 ORTHO05D006968 7.6e-277 957.2 774 69.1
Gohir.D05G099100 Gossypium hirsutum HOM05D005647 ORTHO05D006968 1.1e-267 926.8 769 68.8
Gorai.009G103000 Gossypium raimondii HOM05D005647 ORTHO05D006968 4.0e-262 908.3 769 67.9
Gohir.A05G099200 Gossypium hirsutum HOM05D005647 ORTHO05D006968 4.8e-231 805.1 654 70.2
Atru.chr3.3782 Acer truncatum HOM05D005647 ORTHO05D006968 2.1e-170 603.6 859 46.6
Cfa011418 Carpinus fangiana HOM05D005647 ORTHO05D006968 2.8e-170 603.2 653 54.8
GSVIVG01025064001 Vitis vinifera HOM05D005647 ORTHO05D006968 1.4e-169 600.9 769 48.9
QL03p069904 Quercus lobata HOM05D005647 ORTHO05D006968 1.7e-164 583.9 650 54.0
Manes.04G028600 Manihot esculenta HOM05D005647 ORTHO05D006968 1.7e-156 557.4 763 46.7
Haze_23998 Corylus avellana HOM05D005647 ORTHO05D006968 2.3e-156 557.0 654 52.3
CiPaw.13G102300 Carya illinoinensis HOM05D005647 ORTHO05D006968 5.1e-156 555.8 652 51.4
Ciclev10027867m.g Citrus clementina HOM05D005647 ORTHO05D006968 1.5e-155 554.3 787 45.5
TWI75G1819 Tripterygium wilfordii HOM05D005647 ORTHO05D006968 3.5e-149 533.1 798 44.1
MD11G1117900 Malus domestica HOM05D005647 ORTHO05D006968 5.1e-148 529.3 657 48.9
Actinidia00810 Actinidia chinensis HOM05D005647 ORTHO05D006968 3.1e-145 520.0 665 47.2
Potri.009G025800 Populus trichocarpa HOM05D005647 ORTHO05D006968 5.5e-142 509.2 796 42.8
Cpa.g.sc139.4 Carica papaya HOM05D005647 ORTHO05D006968 1.0e-140 505.0 776 42.5
Prupe.6G088000 Prunus persica HOM05D005647 ORTHO05D006968 2.3e-140 503.8 727 44.3
Rhsim01G0223800 Rhododendron simsii HOM05D005647 ORTHO05D006968 3.9e-140 503.1 660 47.9
RcHm_v2.0_Chr4g0385531 Rosa chinensis HOM05D005647 ORTHO05D006968 6.5e-135 485.7 774 43.7
Lj1A178T39 Lonicera japonica HOM05D005647 ORTHO05D006968 1.1e-134 485.0 482 55.0
RcHm_v2.0_Chr5g0062191 Rosa chinensis HOM05D005647 ORTHO05D006968 1.4e-134 484.6 774 43.5
FAN11G0841 Fragaria x ananassa HOM05D005647 ORTHO05D006968 1.2e-133 481.5 465 58.9
Nitab4.5_0000022g0330 Nicotiana tabacum HOM05D005647 ORTHO05D006968 4.6e-133 479.6 389 63.8
TAR623G0344 Trochodendron aralioides HOM05D005647 ORTHO05D006968 4.6e-133 479.6 532 52.6
FvH4_3g34550 Fragaria vesca HOM05D005647 ORTHO05D006968 3.9e-132 476.5 775 43.6
Nitab4.5_0008854g0020 Nicotiana tabacum HOM05D005647 ORTHO05D006968 6.7e-132 475.7 389 63.8
Sabra09G0017200 Salix brachista HOM05D005647 ORTHO05D000187 9.7e-131 471.9 800 40.9
CANSAT54G2414 Cannabis sativa HOM05D005647 ORTHO05D006968 1.3e-130 471.5 502 54.2
FAN21G3075 Fragaria x ananassa HOM05D005647 ORTHO05D006968 1.4e-129 468.0 775 42.8
FAN25G1201 Fragaria x ananassa HOM05D005647 ORTHO05D006968 1.5e-128 464.5 777 43.0
Cc01_g12040 Coffea canephora HOM05D005647 ORTHO05D006968 2.0e-128 464.2 472 54.4
FAN16G2614 Fragaria x ananassa HOM05D005647 ORTHO05D006968 4.5e-128 463.0 677 44.9
ClCG02G020580 Citrullus lanatus HOM05D005647 ORTHO05D006968 1.3e-127 461.5 653 44.9
Actinidia03769 Actinidia chinensis HOM05D005647 ORTHO05D006968 2.2e-127 460.7 623 47.2
PGSC0003DMG400033668 Solanum tuberosum HOM05D005647 ORTHO05D006968 3.2e-126 456.8 395 61.0
Sed0021109 Sechium edule HOM05D005647 ORTHO05D006968 4.2e-126 456.4 780 40.9
Ca_01361_v3 Cicer arietinum L. HOM05D005647 ORTHO05D006968 1.2e-125 454.9 800 39.9
Lsat_1_v5_gn_5_167021 Lactuca sativa HOM05D005647 ORTHO05D006968 3.6e-125 453.4 352 66.2
Sopen06g001190 Solanum pennellii HOM05D005647 ORTHO05D006968 4.6e-125 453.0 613 45.2
Solyc06g005200.3 Solanum lycopersicum HOM05D005647 ORTHO05D006968 7.9e-125 452.2 615 45.2
Lj3g0017565 Lotus japonicus HOM05D005647 ORTHO05D006968 1.5e-123 448.0 820 40.4
Medtr2g096090 Medicago truncatula HOM05D005647 ORTHO05D006968 5.7e-123 446.0 798 40.1
AL8G36550 Arabidopsis lyrata HOM05D005647 ORTHO05D006968 8.2e-122 442.2 420 55.5
TPR.G17867 Trifolium pratense HOM05D005647 ORTHO05D006968 8.2e-122 442.2 804 40.9
AT5G59980 Arabidopsis thaliana HOM05D005647 ORTHO05D006968 2.4e-121 440.7 358 61.5
TPR.G11621 Trifolium pratense HOM05D005647 ORTHO05D006968 2.4e-121 440.7 806 40.4
Glyma.13G196800 Glycine max HOM05D005647 ORTHO05D006968 9.1e-121 438.7 394 59.6
MELO3C025708.2 Cucumis melo HOM05D005647 ORTHO05D006968 1.5e-120 438.0 729 42.1
Hund18946 Selenicereus undatus HOM05D005647 ORTHO05D006968 3.4e-120 436.8 343 64.7
Lalb_Chr24g0394311 Lupinus albus HOM05D005647 ORTHO05D006968 1.3e-119 434.9 678 41.9
EL10Ac7g15937 Beta vulgaris HOM05D005647 ORTHO05D006968 6.5e-119 432.6 367 59.4
THA.LOC104809599 Tarenaya hassleriana HOM05D005647 ORTHO05D006968 2.1e-117 427.6 669 41.9
MBI14_g34527_MAGBIO Magnolia biondii HOM05D005647 ORTHO05D006968 3.0e-116 423.7 568 46.3
VMungo1080G1709 Vigna mungo HOM05D005647 ORTHO05D006968 3.0e-116 423.7 785 39.2
DCAR_005295 Daucus carota HOM05D005647 ORTHO05D006968 3.9e-116 423.3 675 43.3
Phvul.L002619 Phaseolus vulgaris HOM05D005647 ORTHO05D006968 3.9e-116 423.3 406 55.7
Ah.15g096320 Amaranthus hybridus HOM05D005647 ORTHO05D006968 6.7e-116 422.5 375 57.6
PSO541G4932 Papaver somniferum HOM05D005647 ORTHO05D006968 6.7e-116 422.5 477 51.4
Psat5g282040 Pisum sativum HOM05D005647 ORTHO05D006968 6.7e-116 422.5 815 37.4
Sc14g0000850 Simmondsia chinensis HOM05D005647 ORTHO05D006968 8.8e-116 422.2 354 62.4
Carub.0004s0912 Capsella rubella HOM05D005647 ORTHO05D006968 2.0e-115 421.0 669 40.5
AUR62001855 Chenopodium quinoa HOM05D005647 ORTHO05D006968 2.0e-115 421.0 495 49.5
MSTRG.21166 Avicennia marina HOM05D005647 ORTHO05D006968 4.4e-115 419.9 345 62.6
SGA_v2.0_scaffold61G21232 Striga asiatica HOM05D005647 ORTHO05D006968 5.7e-115 419.5 384 58.6
ECA248G2619 Erigeron canadensis HOM05D005647 ORTHO05D006968 1.3e-114 418.3 359 61.6
HanXRQChr14g0429211 Helianthus annuus HOM05D005647 ORTHO05D006968 1.7e-114 417.9 365 61.6
vmacro14498 Vaccinium macrocarpon HOM05D005647 ORTHO05D006968 1.7e-114 417.9 701 41.4
Migut.D02155 Erythranthe guttata HOM05D005647 ORTHO05D006968 2.2e-114 417.5 443 52.6
Peaxi162Scf00006g01310 Petunia axillaris HOM05D005647 ORTHO05D006968 1.8e-113 414.5 491 50.3
PSO447G0260 Papaver somniferum HOM05D005647 ORTHO05D006968 2.4e-113 414.1 476 49.6
Eucgr.A02758 Eucalyptus grandis HOM05D005647 ORTHO05D006968 7.0e-113 412.5 777 39.6
PGR119G0370 Punica granatum HOM05D005647 ORTHO05D006968 9.1e-113 412.1 490 50.2
PSO675G6613 Papaver somniferum HOM05D005647 ORTHO05D006968 1.2e-112 411.8 430 54.2
Aa31LG1G12110 Aethionema arabicum HOM05D005647 ORTHO05D006968 1.6e-112 411.4 697 40.7
Aqoxy4G03106 Aquilegia oxysepala HOM05D005647 ORTHO05D006968 1.1e-110 405.2 352 59.4
CAN.G200.2 Capsicum annuum HOM05D005647 ORTHO05D006968 1.1e-110 405.2 444 52.0
Thhalv10012856m.g Eutrema salsugineum HOM05D005647 ORTHO05D006968 1.6e-109 401.4 677 40.2
A02p06680 Brassica napus HOM05D005647 ORTHO05D006968 1.1e-107 395.2 362 57.5
C02p11970 Brassica napus HOM05D005647 ORTHO05D006968 1.5e-107 394.8 362 57.5
BraA02t05750Z Brassica rapa HOM05D005647 ORTHO05D006968 1.5e-107 394.8 362 57.5
BolC2t07297H Brassica oleracea HOM05D005647 ORTHO05D006968 2.0e-107 394.4 360 58.3
Aa31LG5G21920 Aethionema arabicum HOM05D005647 ORTHO05D006968 7.5e-107 392.5 312 63.5
BcaB05g22600 Brassica carinata HOM05D005647 ORTHO05D006968 7.5e-107 392.5 382 56.3
SalBow3G2669 Salvia bowleyana HOM05D005647 ORTHO05D006968 9.7e-107 392.1 382 55.5
SalBow3G1239 Salvia bowleyana HOM05D005647 ORTHO05D006968 1.3e-106 391.7 382 55.5
Oeu058515.3 Olea europaea HOM05D005647 ORTHO05D006968 3.5e-104 383.6 687 40.0
Sp6g21650 Schrenkiella parvula HOM05D005647 ORTHO05D006968 4.5e-104 383.3 373 55.2
Aqoxy4G03104_Aqoxy4G03103 Aquilegia oxysepala HOM05D005647 ORTHO05D006968 1.7e-103 381.3 353 58.6
unitig_736.g22430 Utricularia gibba HOM05D005647 ORTHO05D006968 3.8e-103 380.2 383 52.5
BcaC04g19653 Brassica carinata HOM05D005647 ORTHO05D006968 5.0e-103 379.8 362 56.9
BolC9t58115H Brassica oleracea HOM05D005647 ORTHO05D006968 5.0e-103 379.8 362 56.9
BraA10t43800Z Brassica rapa HOM05D005647 ORTHO05D006968 6.5e-103 379.4 385 56.1
C09p52480 Brassica napus HOM05D005647 ORTHO05D006968 1.5e-102 378.3 362 56.4
A10p17190 Brassica napus HOM05D005647 ORTHO05D006968 4.2e-102 376.7 385 56.1
BcaB08g36205 Brassica carinata HOM05D005647 ORTHO05D006968 5.5e-102 376.3 473 48.4
ATR0787G117 Amborella trichopoda HOM05D005647 ORTHO05D006968 2.3e-100 370.9 307 60.3
THA.LOC104813123 Tarenaya hassleriana HOM05D005647 ORTHO05D006968 6.8e-100 369.4 305 62.3
Gorai.013G129300 Gossypium raimondii HOM05D005647 ORTHO05D006968 2.6e-99 367.5 241 80.9
arahy.Tifrunner.gnm1.ann1.7X2355 Arachis hypogaea HOM05D005647 ORTHO05D006968 2.2e-98 364.4 378 52.4
CDE08G0081 Ceratophyllum demersum HOM05D005647 ORTHO05D006968 2.8e-98 364.0 314 59.9
CDE02G4018 Ceratophyllum demersum HOM05D005647 ORTHO05D006968 3.8e-95 353.6 314 58.6
arahy.Tifrunner.gnm1.ann1.W04KXW Arachis hypogaea HOM05D005647 ORTHO05D006968 1.1e-94 352.1 476 44.1
arahy.Tifrunner.gnm1.ann1.S4SLQI Arachis hypogaea HOM05D005647 ORTHO05D006968 1.8e-89 334.7 604 38.2
arahy.Tifrunner.gnm1.ann1.ZDAZ4C Arachis hypogaea HOM05D005647 ORTHO05D006968 9.5e-86 322.4 608 38.0
Nn2g13828 Nelumbo nucifera HOM05D005647 ORTHO05D006968 8.3e-74 282.7 205 68.8
AUR62009649 Chenopodium quinoa HOM05D005647 ORTHO05D006968 1.9e-70 271.6 490 38.8
VMungo1127G1784 Vigna mungo HOM05D005647 ORTHO05D006968 9.5e-70 269.2 208 64.4
Dinv32824 Davidia involucrata HOM05D005647 ORTHO05D006968 2.3e-63 248.1 538 37.2
Pp3c23_18130 Physcomitrium patens HOM05D005647 ORTHO05D006968 1.1e-62 245.7 266 47.7
Mapoly0041s0094 Marchantia polymorpha HOM05D005647 ORTHO05D006968 4.4e-59 233.8 353 37.4
SEGI_32841 Sequoiadendron giganteum HOM05D005647 ORTHO05D006968 6.4e-58 229.9 232 50.4
Os12g0175900 Oryza sativa ssp. japonica HOM05D005647 ORTHO05D006968 4.1e-57 227.3 297 45.1
CsaV3_6G022020 Cucumis sativus L. HOM05D005647 ORTHO05D006968 2.7e-56 224.6 378 42.9
Zm00001eb163100 Zea mays HOM05D005647 ORTHO05D006968 1.0e-55 222.6 379 39.3
VMungo1127G0608 Vigna mungo HOM05D005647 ORTHO05D006968 7.4e-38 163.3 209 45.9
MBI03_g45445_MAGBIO Magnolia biondii HOM05D005647 ORTHO05D006968 2.1e-37 161.8 129 66.7
Aqoxy4G01384 Aquilegia oxysepala HOM05D005647 ORTHO05D006968 2.0e-35 155.2 113 67.3
Lsat_1_v5_gn_5_100621 Lactuca sativa HOM05D005647 ORTHO05D006968 1.1e-33 149.4 149 54.4
VMungo1127G1495 Vigna mungo HOM05D005647 ORTHO05D006968 2.4e-33 148.3 151 54.3
SMO348G0064 Selaginella moellendorffii HOM05D005647 ORTHO05D006968 1.3e-26 125.9 128 48.4
CARHR273620 Cardamine hirsuta HOM05D005647 ORTHO05D006968 3.8e-26 124.4 456 30.3
Cre02.g088050 Chlamydomonas reinhardtii HOM05D005647 ORTHO05D006968 3.3e-22 111.3 288 28.1
EL10Ac9g22529 Beta vulgaris HOM05D005647 ORTHO05D006968 2.8e-21 108.2 82 61.0
SEGI_06158 Sequoiadendron giganteum HOM05D005647 ORTHO05D006968 4.1e-20 104.4 110 53.6
MBI10_g46876_MAGBIO Magnolia biondii HOM05D005647 ORTHO05D006968 1.2e-19 102.8 83 62.7
Gohir.D11G155700 Gossypium hirsutum HOM05D001229 ORTHO05D011852 2.5e-17 95.1 57 84.2
Gorai.007G165900 Gossypium raimondii HOM05D001229 ORTHO05D011852 2.5e-17 95.1 57 84.2
QL03p025644 Quercus lobata HOM05D005647 ORTHO05D006968 1.0e-15 89.7 62 67.7
MCO02G042 Micromonas commoda HOM05D005647 ORTHO05D006968 8.7e-15 86.7 174 29.9
MBI14_g07932_MAGBIO Magnolia biondii HOM05D002922 ORTHO05D006968 4.8e-13 80.9 55 72.7
C07p28110 Brassica napus HOM05D008189 ORTHO05D031905 1.5e-06 59.3 71 45.1
QL01p034573 Quercus lobata HOM05D005647 ORTHO05D006968 2.6e-06 58.5 66 51.5
Cfa010667 Carpinus fangiana HOM05D001360 ORTHO05D001231 9.7e-06 56.6 109 34.9


User provided reference genes

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