Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib150G0143 Durio zibethinus HOM05D007055 ORTHO05D008943 5.2e-67 258.1 183 100.0
Duzib168G0293 Durio zibethinus HOM05D007055 ORTHO05D008943 1.7e-41 173.3 151 68.2
Thecc.09G245700 Theobroma cacao HOM05D007055 ORTHO05D008943 7.1e-40 167.9 155 65.2
COL.COLO4_07385 Corchorus olitorius HOM05D007055 ORTHO05D008943 2.7e-39 166.0 154 66.2
Gorai.009G077700 Gossypium raimondii HOM05D007055 ORTHO05D008943 9.0e-35 151.0 149 62.4
Gohir.A05G073500 Gossypium hirsutum HOM05D007055 ORTHO05D008943 1.2e-34 150.6 155 61.9
Gohir.D05G076400 Gossypium hirsutum HOM05D007055 ORTHO05D008943 3.4e-34 149.1 154 59.7
arahy.Tifrunner.gnm1.ann1.FS1PG6 Arachis hypogaea HOM05D007055 ORTHO05D008943 1.3e-28 130.6 97 71.1
arahy.Tifrunner.gnm1.ann1.4D1XNM Arachis hypogaea HOM05D007055 ORTHO05D008943 6.2e-28 128.3 87 74.7
Phvul.005G056000 Phaseolus vulgaris HOM05D007055 ORTHO05D008943 5.3e-27 125.2 84 76.2
Lj5A202T45 Lonicera japonica HOM05D007055 ORTHO05D008943 9.0e-27 124.4 91 69.2
Cfa019436 Carpinus fangiana HOM05D007055 ORTHO05D008943 1.2e-26 124.0 88 73.9
Actinidia07345 Actinidia chinensis HOM05D007055 ORTHO05D008943 2.0e-26 123.2 86 75.6
Sabra11G0128800 Salix brachista HOM05D007055 ORTHO05D008943 2.0e-26 123.2 80 81.2
Sed0014529 Sechium edule HOM05D007055 ORTHO05D008943 2.6e-26 122.9 87 73.6
Manes.06G171200 Manihot esculenta HOM05D007055 ORTHO05D008943 4.5e-26 122.1 81 80.2
Potri.011G144400 Populus trichocarpa HOM05D007055 ORTHO05D008943 4.5e-26 122.1 88 73.9
Lalb_Chr25g0285111 Lupinus albus HOM05D007055 ORTHO05D008943 5.8e-26 121.7 87 73.6
Atru.chr12.2186 Acer truncatum HOM05D007055 ORTHO05D008943 7.6e-26 121.3 84 76.2
PSO541G2194 Papaver somniferum HOM05D007055 ORTHO05D008943 7.6e-26 121.3 84 73.8
PSO675G8693 Papaver somniferum HOM05D007055 ORTHO05D008943 7.6e-26 121.3 84 73.8
Ca_03690_v3 Cicer arietinum L. HOM05D007055 ORTHO05D008943 9.9e-26 120.9 84 75.0
Hma1.2p1_0151F.1_g066890 Hydrangea macrophylla HOM05D007055 ORTHO05D008943 9.9e-26 120.9 80 78.8
Manes.06G170400 Manihot esculenta HOM05D007055 ORTHO05D008943 9.9e-26 120.9 81 79.0
CANSAT56G2639 Cannabis sativa HOM05D007055 ORTHO05D008943 1.3e-25 120.6 83 77.1
FvH4_3g16000 Fragaria vesca HOM05D007055 ORTHO05D008943 1.7e-25 120.2 91 68.1
Potri.008G043200 Populus trichocarpa HOM05D007055 ORTHO05D008943 1.7e-25 120.2 80 78.8
PGR031G2131 Punica granatum HOM05D007055 ORTHO05D008943 1.7e-25 120.2 88 70.5
RcHm_v2.0_Chr5g0026941 Rosa chinensis HOM05D007055 ORTHO05D008943 1.7e-25 120.2 91 69.2
Aqoxy1G01599 Aquilegia oxysepala HOM05D007055 ORTHO05D008943 2.2e-25 119.8 84 75.0
CSS0027098 Camellia sinensis var. sinensis HOM05D007055 ORTHO05D008943 2.2e-25 119.8 93 66.7
Lj3g0013500 Lotus japonicus HOM05D007055 ORTHO05D008943 2.2e-25 119.8 87 73.6
MELO3C010559.2 Cucumis melo HOM05D007055 ORTHO05D008943 2.9e-25 119.4 87 70.1
Glyma.08G173000 Glycine max HOM05D007055 ORTHO05D008943 2.9e-25 119.4 84 75.0
Psat1g002720 Pisum sativum HOM05D007055 ORTHO05D008943 2.9e-25 119.4 84 73.8
CiPaw.12G045200 Carya illinoinensis HOM05D007055 ORTHO05D008943 3.8e-25 119.0 88 70.5
FAN11G2295 Fragaria x ananassa HOM05D007055 ORTHO05D008943 4.9e-25 118.6 83 71.1
FAN21G0096 Fragaria x ananassa HOM05D007055 ORTHO05D008943 4.9e-25 118.6 83 71.1
Lsat_1_v5_gn_7_72120 Lactuca sativa HOM05D007055 ORTHO05D008943 4.9e-25 118.6 80 77.5
CsaV3_4G031800 Cucumis sativus L. HOM05D007055 ORTHO05D008943 6.4e-25 118.2 87 69.0
FAN16G3461 Fragaria x ananassa HOM05D007055 ORTHO05D008943 6.4e-25 118.2 110 59.1
Medtr2g069750 Medicago truncatula HOM05D007055 ORTHO05D008943 6.4e-25 118.2 85 72.9
ClCG11G016330 Citrullus lanatus HOM05D007055 ORTHO05D008943 8.4e-25 117.9 87 70.1
ECA240G0655 Erigeron canadensis HOM05D007055 ORTHO05D008943 8.4e-25 117.9 84 73.8
Ciclev10022701m.g Citrus clementina HOM05D007055 ORTHO05D008943 1.4e-24 117.1 87 73.6
FAN21G3903 Fragaria x ananassa HOM05D007055 ORTHO05D008943 1.9e-24 116.7 83 69.9
TAR627G0757 Trochodendron aralioides HOM05D007055 ORTHO05D008943 1.9e-24 116.7 83 71.1
Glyma.15G254500 Glycine max HOM05D007055 ORTHO05D008943 2.4e-24 116.3 84 75.0
TWI38G0074 Tripterygium wilfordii HOM05D007055 ORTHO05D008943 2.4e-24 116.3 78 78.2
DCAR_013747 Daucus carota HOM05D007055 ORTHO05D008943 3.2e-24 115.9 83 72.3
Rhsim06G0238300 Rhododendron simsii HOM05D007055 ORTHO05D008943 3.2e-24 115.9 84 72.6
Sc03g0007920 Simmondsia chinensis HOM05D007055 ORTHO05D008943 3.2e-24 115.9 84 72.6
Hund02291 Selenicereus undatus HOM05D007055 ORTHO05D008943 9.3e-24 114.4 88 64.8
AT1G79070 Arabidopsis thaliana HOM05D007055 ORTHO05D008943 2.1e-23 113.2 87 65.5
BolC6t40312H Brassica oleracea HOM05D007055 ORTHO05D008943 2.1e-23 113.2 87 64.4
Thhalv10019307m.g Eutrema salsugineum HOM05D007055 ORTHO05D008943 2.1e-23 113.2 91 63.7
MD05G1216100 Malus domestica HOM05D007055 ORTHO05D008943 2.1e-23 113.2 95 66.3
Nn7g37868 Nelumbo nucifera HOM05D007055 ORTHO05D008943 2.1e-23 113.2 83 69.9
AL2G39530 Arabidopsis lyrata HOM05D007055 ORTHO05D008943 2.7e-23 112.8 87 65.5
CARHR072740 Cardamine hirsuta HOM05D007055 ORTHO05D008943 3.5e-23 112.5 87 67.8
BcaC08g47470 Brassica carinata HOM05D007055 ORTHO05D008943 6.0e-23 111.7 87 63.2
Solyc07g066370.3 Solanum lycopersicum HOM05D007055 ORTHO05D008943 6.0e-23 111.7 87 67.8
A07p44210 Brassica napus HOM05D007055 ORTHO05D008943 7.9e-23 111.3 87 63.2
HanXRQChr13g0408571 Helianthus annuus HOM05D007055 ORTHO05D008943 7.9e-23 111.3 80 71.2
SalBow5G4782 Salvia bowleyana HOM05D000091 ORTHO05D003024 7.9e-23 111.3 107 57.0
Sopen07g034550 Solanum pennellii HOM05D007055 ORTHO05D008943 7.9e-23 111.3 87 67.8
GSVIVG01020441001 Vitis vinifera HOM05D007055 ORTHO05D008943 7.9e-23 111.3 112 58.0
Sp5g34120 Schrenkiella parvula HOM05D007055 ORTHO05D008943 1.0e-22 110.9 91 62.6
BcaB02g08664 Brassica carinata HOM05D007055 ORTHO05D008943 1.3e-22 110.5 87 63.2
C06p52940 Brassica napus HOM05D007055 ORTHO05D008943 1.3e-22 110.5 81 66.7
Manes.06G170801 Manihot esculenta HOM05D007055 ORTHO05D008943 1.3e-22 110.5 84 71.4
MBI18_g28200_MAGBIO Magnolia biondii HOM05D007055 ORTHO05D008943 1.8e-22 110.2 80 73.8
ATR1098G113 Amborella trichopoda HOM05D007055 ORTHO05D008943 2.3e-22 109.8 93 59.1
AUR62044625 Chenopodium quinoa HOM05D007055 ORTHO05D008943 2.3e-22 109.8 81 67.9
Ah.06g187070 Amaranthus hybridus HOM05D007055 ORTHO05D008943 3.0e-22 109.4 81 70.4
EL10Ac4g08563 Beta vulgaris HOM05D007055 ORTHO05D008943 3.9e-22 109.0 84 69.0
Manes.06G169900 Manihot esculenta HOM05D007055 ORTHO05D008943 3.9e-22 109.0 81 72.8
Peaxi162Scf00232g01121 Petunia axillaris HOM05D007055 ORTHO05D008943 3.9e-22 109.0 84 66.7
BraA07t31929Z Brassica rapa HOM05D007055 ORTHO05D008943 5.1e-22 108.6 81 65.4
BcaNung04909 Brassica carinata HOM05D007055 ORTHO05D008943 8.7e-22 107.8 77 68.8
Cc05_g15950 Coffea canephora HOM05D007055 ORTHO05D008943 1.1e-21 107.5 81 67.9
PGSC0003DMG400022130 Solanum tuberosum HOM05D007055 ORTHO05D008943 1.1e-21 107.5 84 66.7
CAN.G943.31 Capsicum annuum HOM05D007055 ORTHO05D008943 2.5e-21 106.3 83 68.7
Carub.0002s2594 Capsella rubella HOM05D007055 ORTHO05D008943 3.3e-21 105.9 81 65.4
Migut.H02189 Erythranthe guttata HOM05D007055 ORTHO05D008943 4.3e-21 105.5 80 65.0
HPP92_002254 Vanilla planifolia HOM05D007055 ORTHO05D008943 1.3e-20 104.0 77 70.1
MSTRG.22977 Avicennia marina HOM05D007055 ORTHO05D008943 1.6e-20 103.6 84 63.1
Oeu002805.1 Olea europaea HOM05D007055 ORTHO05D008943 1.6e-20 103.6 80 66.2
THA.LOC104808116 Tarenaya hassleriana HOM05D007055 ORTHO05D008943 2.8e-20 102.8 78 64.1
Aa31LG4G1920 Aethionema arabicum HOM05D007055 ORTHO05D008943 1.1e-19 100.9 78 66.7
Manes.06G170100 Manihot esculenta HOM05D007055 ORTHO05D008943 1.4e-19 100.5 84 66.7
Manes.06G171100 Manihot esculenta HOM05D007055 ORTHO05D008943 3.1e-19 99.4 97 60.8
Eucgr.F03184 Eucalyptus grandis HOM05D007055 ORTHO05D008943 4.0e-19 99.0 81 65.4
Prupe.4G143100 Prunus persica HOM05D007055 ORTHO05D008943 6.9e-19 98.2 83 65.1
SGA_v2.0_scaffold2G00966 Striga asiatica HOM05D007055 ORTHO05D008943 9.0e-19 97.8 84 56.0
unitig_699.g19681 Utricularia gibba HOM05D007055 ORTHO05D008943 2.6e-18 96.3 80 62.5
CDE12G0729 Ceratophyllum demersum HOM05D007055 ORTHO05D008943 3.4e-18 95.9 78 64.1
Nitab4.5_0001749g0090 Nicotiana tabacum HOM05D007055 ORTHO05D008943 1.7e-17 93.6 112 50.9
Pp3c15_3290 Physcomitrium patens HOM05D007055 ORTHO05D008943 3.2e-16 89.4 78 56.4
AUR62043058 Chenopodium quinoa HOM05D007055 ORTHO05D008943 7.1e-16 88.2 117 46.2
BcaC08g45387 Brassica carinata HOM05D007055 ORTHO05D008943 9.3e-16 87.8 79 59.5
Os08g0129900 Oryza sativa ssp. japonica HOM05D007055 ORTHO05D008943 9.3e-16 87.8 93 48.4
vmacro11656 Vaccinium macrocarpon HOM05D007055 ORTHO05D008943 1.2e-15 87.4 77 62.3
TPR.G9749 Trifolium pratense HOM05D007055 ORTHO05D008943 4.6e-15 85.5 56 76.8
Mapoly0112s0058 Marchantia polymorpha HOM05D007055 ORTHO05D008943 1.3e-14 84.0 89 50.6
SHI01886 Sapria himalayana HOM05D007055 ORTHO05D008943 6.7e-14 81.6 80 53.8
Zm00001eb173230 Zea mays HOM05D007055 ORTHO05D008943 1.5e-13 80.5 77 49.4
CBR_g41533 Chara braunii HOM05D000019 ORTHO05D000048 1.1e-11 74.3 78 43.6
SMO367G1177 Selaginella moellendorffii HOM05D007055 ORTHO05D008943 1.4e-11 73.9 77 53.2
SalBow5G1530 Salvia bowleyana HOM05D000091 ORTHO05D003024 6.9e-11 71.6 52 69.2
AagrBONN_evm.TU.Sc2ySwM_228.2782 Anthoceros agrestis HOM05D007055 ORTHO05D008943 5.9e-10 68.6 77 46.8
Nitab4.5_0007742g0030 Nicotiana tabacum HOM05D007055 ORTHO05D008943 7.7e-10 68.2 50 68.0


User provided reference genes

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