Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib150G0107 Durio zibethinus HOM05D007000 ORTHO05D009020 0.0e+00 1597.4 852 100.0
Gohir.A07G107200 Gossypium hirsutum HOM05D007000 ORTHO05D009020 0.0e+00 1228.4 874 77.0
Gohir.A07G107100 Gossypium hirsutum HOM05D007000 ORTHO05D009020 0.0e+00 1224.9 876 73.5
Gorai.001G119400 Gossypium raimondii HOM05D007000 ORTHO05D009020 0.0e+00 1219.1 876 76.5
Gorai.001G119500 Gossypium raimondii HOM05D007000 ORTHO05D009020 0.0e+00 1202.6 870 75.5
Gohir.D07G111200 Gossypium hirsutum HOM05D007000 ORTHO05D009020 0.0e+00 1201.8 870 74.9
Potri.009G149100 Populus trichocarpa HOM05D007000 ORTHO05D009020 5.8e-312 1074.7 795 67.8
QL01p013748 Quercus lobata HOM05D007000 ORTHO05D009020 1.7e-311 1072.4 794 71.9
Prupe.6G118900 Prunus persica HOM05D007000 ORTHO05D009020 4.1e-311 1071.2 792 70.6
Sabra09G0117700 Salix brachista HOM05D007000 ORTHO05D009020 1.2e-307 1059.7 796 66.8
FvH4_3g29910 Fragaria vesca HOM05D007000 ORTHO05D009020 1.3e-301 1039.6 793 69.6
FAN11G3012 Fragaria x ananassa HOM05D007000 ORTHO05D009020 1.3e-301 1039.6 793 69.6
Eucgr.J00424 Eucalyptus grandis HOM05D007000 ORTHO05D009020 6.0e-299 1030.8 783 66.7
GSVIVG01031401001 Vitis vinifera HOM05D007000 ORTHO05D009020 6.0e-299 1030.8 816 67.3
MD03G1134600 Malus domestica HOM05D007000 ORTHO05D009020 7.8e-299 1030.4 793 70.2
CiPaw.14G103700 Carya illinoinensis HOM05D007000 ORTHO05D009020 3.0e-298 1028.5 792 68.3
FAN21G0141 Fragaria x ananassa HOM05D007000 ORTHO05D009020 4.3e-297 1024.6 826 67.8
RcHm_v2.0_Chr5g0055251 Rosa chinensis HOM05D007000 ORTHO05D009020 2.3e-295 1018.8 792 68.3
COL.COLO4_19295 Corchorus olitorius HOM05D007000 ORTHO05D009020 6.4e-293 1010.7 741 75.8
TAR623G0382 Trochodendron aralioides HOM05D007000 ORTHO05D009020 2.1e-291 1005.7 824 63.8
FAN16G1383 Fragaria x ananassa HOM05D007000 ORTHO05D009020 3.3e-289 998.4 840 65.5
TWI75G0014 Tripterygium wilfordii HOM05D007000 ORTHO05D009020 5.2e-287 991.1 797 66.9
Dinv12525 Davidia involucrata HOM05D007000 ORTHO05D009020 2.9e-285 985.3 729 70.4
Nn6g35052 Nelumbo nucifera HOM05D007000 ORTHO05D009020 1.3e-282 976.5 793 66.3
Ciclev10027793m.g Citrus clementina HOM05D007000 ORTHO05D009020 1.7e-282 976.1 804 63.7
ClCG02G021900 Citrullus lanatus HOM05D007000 ORTHO05D009020 5.1e-282 974.5 813 64.8
PGR119G0747 Punica granatum HOM05D007000 ORTHO05D009020 5.1e-282 974.5 792 65.7
Sed0022610 Sechium edule HOM05D007000 ORTHO05D009020 1.4e-279 966.5 814 64.5
Manes.04G009000 Manihot esculenta HOM05D007000 ORTHO05D009020 9.0e-279 963.8 784 66.3
Thecc.09G291900 Theobroma cacao HOM05D007000 ORTHO05D009020 3.4e-278 961.8 621 81.6
Sopen11g026580 Solanum pennellii HOM05D007000 ORTHO05D009020 2.1e-272 942.6 724 68.1
BraA10t43904Z Brassica rapa HOM05D007000 ORTHO05D009020 3.6e-272 941.8 804 65.8
Solyc11g066870.3 Solanum lycopersicum HOM05D007000 ORTHO05D009020 1.1e-271 940.3 722 67.6
CSS0049563 Camellia sinensis var. sinensis HOM05D007000 ORTHO05D009020 2.6e-270 935.6 579 77.5
Nitab4.5_0001453g0060 Nicotiana tabacum HOM05D007000 ORTHO05D009020 2.6e-270 935.6 743 65.8
CANSAT54G2429 Cannabis sativa HOM05D007000 ORTHO05D009020 4.5e-270 934.9 793 62.9
AL6G33670 Arabidopsis lyrata HOM05D007000 ORTHO05D009020 1.3e-269 933.3 836 63.8
A10p18280 Brassica napus HOM05D007000 ORTHO05D009020 2.2e-269 932.6 817 64.4
PGSC0003DMG400026534 Solanum tuberosum HOM05D007000 ORTHO05D009020 3.8e-269 931.8 725 66.6
CARHR190940 Cardamine hirsuta HOM05D007000 ORTHO05D009020 4.9e-269 931.4 841 62.5
Oeu050179.1 Olea europaea HOM05D007000 ORTHO05D009020 8.4e-269 930.6 740 66.6
CsaV3_6G014720 Cucumis sativus L. HOM05D007000 ORTHO05D009020 1.4e-268 929.9 822 63.7
MSTRG.18732 Avicennia marina HOM05D007000 ORTHO05D009020 9.3e-268 927.2 747 64.0
Sp6g22700 Schrenkiella parvula HOM05D007000 ORTHO05D009020 6.0e-267 924.5 837 62.8
Thhalv10012645m.g Eutrema salsugineum HOM05D007000 ORTHO05D009020 7.9e-267 924.1 841 62.7
Cc01_g09830 Coffea canephora HOM05D007000 ORTHO05D009020 1.0e-266 923.7 736 66.2
BcaB08g36412 Brassica carinata HOM05D007000 ORTHO05D009020 3.3e-265 918.7 793 64.9
Lj3g0010220 Lotus japonicus HOM05D007000 ORTHO05D009020 7.4e-265 917.5 791 63.5
Migut.D02336 Erythranthe guttata HOM05D007000 ORTHO05D009020 9.6e-265 917.1 744 63.0
MELO3C021453.2 Cucumis melo HOM05D007000 ORTHO05D009020 1.6e-264 916.4 823 62.1
BolC9t58265H Brassica oleracea HOM05D007000 ORTHO05D009020 2.8e-264 915.6 800 64.5
AT5G22640 Arabidopsis thaliana HOM05D007000 ORTHO05D009020 6.2e-264 914.4 842 61.9
Lalb_Chr24g0395131 Lupinus albus HOM05D007000 ORTHO05D009020 6.2e-264 914.4 808 59.5
CAN.G644.32 Capsicum annuum HOM05D007000 ORTHO05D009020 1.1e-263 913.7 716 65.1
Nitab4.5_0007303g0050 Nicotiana tabacum HOM05D007000 ORTHO05D009020 3.4e-262 908.7 774 62.3
Aqoxy1G00944 Aquilegia oxysepala HOM05D007000 ORTHO05D009020 1.0e-261 907.1 797 59.8
C09p53930 Brassica napus HOM05D007000 ORTHO05D009020 5.5e-260 901.4 826 62.5
Carub.0006s2036 Capsella rubella HOM05D007000 ORTHO05D009020 9.3e-260 900.6 722 68.0
FAN16G0383 Fragaria x ananassa HOM05D007000 ORTHO05D009020 3.0e-258 895.6 904 58.5
Glyma.13G319300 Glycine max HOM05D007000 ORTHO05D009020 2.5e-257 892.5 800 60.6
Sc12g0004140 Simmondsia chinensis HOM05D007000 ORTHO05D009020 1.6e-256 889.8 700 63.6
Glyma.12G181600 Glycine max HOM05D007000 ORTHO05D009020 4.8e-256 888.3 811 60.3
EL10Ac9g21077 Beta vulgaris HOM05D007000 ORTHO05D009020 3.2e-252 875.5 783 63.5
AUR62038302 Chenopodium quinoa HOM05D007000 ORTHO05D009020 5.5e-252 874.8 792 59.1
Aa31LG1G12980 Aethionema arabicum HOM05D007000 ORTHO05D009020 1.6e-251 873.2 843 59.4
PSO339G5428 Papaver somniferum HOM05D007000 ORTHO05D009020 2.5e-249 865.9 788 60.5
Phvul.005G127300 Phaseolus vulgaris HOM05D007000 ORTHO05D009020 2.5e-249 865.9 793 61.7
PSO063G0097 Papaver somniferum HOM05D007000 ORTHO05D009020 9.0e-247 857.4 787 60.4
AUR62023939 Chenopodium quinoa HOM05D007000 ORTHO05D009020 2.0e-246 856.3 579 71.8
VMungo1080G1560 Vigna mungo HOM05D007000 ORTHO05D009020 5.0e-245 851.7 833 58.2
Medtr2g084835 Medicago truncatula HOM05D007000 ORTHO05D009020 2.5e-241 839.3 791 55.5
ECA238G2375 Erigeron canadensis HOM05D007000 ORTHO05D009020 1.3e-240 837.0 799 59.7
Ca_01679_v3 Cicer arietinum L. HOM05D007000 ORTHO05D009020 4.8e-240 835.1 783 59.6
Hund00783 Selenicereus undatus HOM05D007000 ORTHO05D009020 1.4e-239 833.6 785 59.5
arahy.Tifrunner.gnm1.ann1.K5NCJW Arachis hypogaea HOM05D007000 ORTHO05D009020 3.4e-238 828.9 884 54.6
DCAR_012163 Daucus carota HOM05D007000 ORTHO05D009020 5.9e-238 828.2 759 58.5
ATR0820G103 Amborella trichopoda HOM05D007000 ORTHO05D009020 1.7e-237 826.6 814 56.1
unitig_747.g21960 Utricularia gibba HOM05D007000 ORTHO05D009020 5.5e-236 821.6 742 61.1
arahy.Tifrunner.gnm1.ann1.0Z9K9L Arachis hypogaea HOM05D007000 ORTHO05D009020 3.6e-235 818.9 887 54.3
SGA_v2.0_scaffold193G40708 Striga asiatica HOM05D007000 ORTHO05D009020 2.6e-233 812.8 703 65.4
CDE02G4201 Ceratophyllum demersum HOM05D007000 ORTHO05D009020 3.7e-232 808.9 747 58.4
Ah.01g004600 Amaranthus hybridus HOM05D007000 ORTHO05D009020 1.0e-229 800.8 557 68.6
TPR.G32364 Trifolium pratense HOM05D007000 ORTHO05D009020 3.2e-228 795.8 811 55.7
HanXRQChr14g0451961 Helianthus annuus HOM05D007000 ORTHO05D009020 7.5e-225 784.6 809 54.0
Lsat_1_v5_gn_2_96400 Lactuca sativa HOM05D007000 ORTHO05D009020 1.4e-223 780.4 691 62.4
Gohir.D07G111100 Gossypium hirsutum HOM05D007000 ORTHO05D009020 1.6e-222 776.9 596 72.0
Psat5g254800 Pisum sativum HOM05D007000 ORTHO05D009020 2.7e-222 776.2 801 54.3
Lj1A221T47 Lonicera japonica HOM05D007000 ORTHO05D009020 2.7e-219 766.1 781 55.8
Peaxi162Scf00789g00534 Petunia axillaris HOM05D007000 ORTHO05D009020 1.8e-186 657.1 511 65.4
Atru.chr3.3385 Acer truncatum HOM05D007000 ORTHO05D009020 5.4e-167 592.4 503 63.2
HPP92_011511 Vanilla planifolia HOM05D007000 ORTHO05D009020 1.6e-158 564.3 330 75.8
Pp3c14_2260 Physcomitrium patens HOM05D007000 ORTHO05D009020 5.1e-157 559.3 455 58.2
Actinidia37100 Actinidia chinensis HOM05D007000 ORTHO05D009020 3.1e-154 550.1 803 45.0
Mapoly0021s0145 Marchantia polymorpha HOM05D007000 ORTHO05D009020 2.6e-153 547.0 513 51.9
Haze_23451 Corylus avellana HOM05D007000 ORTHO05D009020 5.1e-149 532.7 407 64.1
ScUNg0001440 Simmondsia chinensis HOM05D007000 ORTHO05D009020 1.1e-138 498.4 421 62.5
SEGI_23936 Sequoiadendron giganteum HOM05D007000 ORTHO05D009020 9.3e-135 485.3 675 44.0
HPP92_011563 Vanilla planifolia HOM05D007000 ORTHO05D009020 2.9e-128 463.8 264 77.7
AagrBONN_evm.TU.Sc2ySwM_344.1665 Anthoceros agrestis HOM05D007000 ORTHO05D009020 2.5e-111 407.5 346 55.2
MD11G1157100 Malus domestica HOM05D007000 ORTHO05D009020 1.0e-109 402.1 522 53.6
HPP92_011520 Vanilla planifolia HOM05D007000 ORTHO05D009020 2.4e-106 391.0 407 49.4
Oeu050178.1 Olea europaea HOM05D007000 ORTHO05D009020 2.9e-96 357.5 386 59.1
Atru.chr3.3384 Acer truncatum HOM05D007000 ORTHO05D009020 2.2e-91 341.3 188 81.4
Cpa.g.sc47.64 Carica papaya HOM05D007000 ORTHO05D009020 2.9e-83 314.3 331 50.5
Cpa.g.sc47.63 Carica papaya HOM05D007000 ORTHO05D009020 2.5e-79 301.2 321 64.5
Peaxi162Scf00789g00535 Petunia axillaris HOM05D007000 ORTHO05D009020 3.1e-77 294.3 196 69.4
BcaC04g19594 Brassica carinata HOM05D007000 ORTHO05D009020 9.9e-68 262.7 170 70.0
TWI75G1888 Tripterygium wilfordii HOM05D007893 ORTHO05D010042 2.3e-32 145.2 117 60.7
CBR_g22485 Chara braunii HOM05D000019 ORTHO05D000048 3.3e-31 141.4 352 29.5
Actinidia35447 Actinidia chinensis HOM05D007000 ORTHO05D009020 6.2e-30 137.1 75 81.3
HPP92_011562 Vanilla planifolia HOM05D007000 ORTHO05D009020 1.3e-22 112.8 132 41.7
Aqoxy5G03114 Aquilegia oxysepala HOM05D003707 ORTHO05D004309 2.9e-19 101.7 77 61.0
Potri.004G188432 Populus trichocarpa HOM05D007000 ORTHO05D030830 1.4e-18 99.4 159 58.5
SEGI_03022 Sequoiadendron giganteum HOM05D007000 ORTHO05D009020 1.5e-12 79.3 72 45.8
Actinidia27040 Actinidia chinensis HOM05D007000 ORTHO05D030830 1.6e-09 69.3 285 35.4


User provided reference genes

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