Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib147G1409 Durio zibethinus HOM05D004950 ORTHO05D004838 3.6e-205 718.8 615 100.0
Duzib264G0159 Durio zibethinus HOM05D004950 ORTHO05D004838 3.9e-151 539.3 620 70.2
Thecc.01G096300 Theobroma cacao HOM05D004950 ORTHO05D004838 3.3e-142 509.6 619 70.3
COL.COLO4_27289 Corchorus olitorius HOM05D004950 ORTHO05D004838 1.7e-82 311.2 609 62.1
Gohir.A11G204800 Gossypium hirsutum HOM05D004950 ORTHO05D004838 4.0e-79 300.1 610 46.2
Gorai.007G059800 Gossypium raimondii HOM05D004950 ORTHO05D004838 2.0e-78 297.7 601 45.4
Gohir.D11G219100 Gossypium hirsutum HOM05D004950 ORTHO05D004838 2.9e-77 293.9 610 48.0
Gohir.A02G129300 Gossypium hirsutum HOM05D004950 ORTHO05D004838 2.7e-67 260.8 612 52.5
Gohir.D11G054550 Gossypium hirsutum HOM05D004950 ORTHO05D004838 3.2e-60 237.3 847 33.8
Gohir.D03G040150 Gossypium hirsutum HOM05D000001 ORTHO05D000003 2.3e-58 231.1 546 57.0
Gohir.A11G051150 Gossypium hirsutum HOM05D004950 ORTHO05D004838 1.9e-57 228.0 811 36.5
Gorai.003G041200 Gossypium raimondii HOM05D000001 ORTHO05D000003 3.3e-57 227.3 544 53.9
Cpa.g.sc55.78 Carica papaya HOM05D004950 ORTHO05D004838 3.7e-48 197.2 635 37.3
Atru.chr3.1354 Acer truncatum HOM05D004950 ORTHO05D004838 2.4e-47 194.5 634 35.0
Sabra07G0079900 Salix brachista HOM05D004950 ORTHO05D004838 1.2e-46 192.2 615 35.4
Eucgr.H04743 Eucalyptus grandis HOM05D004950 ORTHO05D004838 2.1e-43 181.4 622 41.6
Cfa002603 Carpinus fangiana HOM05D004950 ORTHO05D004838 4.6e-43 180.3 619 35.4
PGR102G2692 Punica granatum HOM05D004950 ORTHO05D004838 6.7e-42 176.4 633 33.8
Haze_24857 Corylus avellana HOM05D004950 ORTHO05D004838 1.5e-41 175.3 594 35.2
CiPaw.04G103200 Carya illinoinensis HOM05D004950 ORTHO05D004838 3.3e-41 174.1 630 36.0
TAR376G0363 Trochodendron aralioides HOM05D004950 ORTHO05D004838 1.7e-40 171.8 293 41.6
Potri.005G072400 Populus trichocarpa HOM05D004950 ORTHO05D004838 1.4e-39 168.7 609 47.8
QL06p048197 Quercus lobata HOM05D004950 ORTHO05D004838 2.9e-37 161.0 635 40.5
TWI74G0620 Tripterygium wilfordii HOM05D004950 ORTHO05D004838 8.5e-37 159.5 315 43.2
Potri.007G096600 Populus trichocarpa HOM05D004950 ORTHO05D004838 3.6e-35 154.1 625 43.7
Sabra05G0059200 Salix brachista HOM05D004950 ORTHO05D004838 6.1e-35 153.3 618 42.4
TWI53G1075 Tripterygium wilfordii HOM05D004950 ORTHO05D004838 2.6e-33 147.9 317 38.5
CANSAT01G1426 Cannabis sativa HOM05D004950 ORTHO05D004838 4.8e-32 143.7 296 51.0
Dinv08856 Davidia involucrata HOM05D004950 ORTHO05D004838 6.3e-32 143.3 639 44.1
CiPaw.03G145300 Carya illinoinensis HOM05D004950 ORTHO05D004838 1.4e-31 142.1 611 36.0
Aqoxy6G00721 Aquilegia oxysepala HOM05D004950 ORTHO05D004838 1.2e-30 139.0 291 47.8
Ciclev10026989m.g Citrus clementina HOM05D004950 ORTHO05D000003 4.2e-28 130.6 543 37.9
Lalb_Chr11g0075431 Lupinus albus HOM05D004950 ORTHO05D004838 8.0e-27 126.3 300 43.7
Oeu033042.1 Olea europaea HOM05D004950 ORTHO05D004838 2.3e-26 124.8 638 30.6
CSS0046927 Camellia sinensis var. sinensis HOM05D004950 ORTHO05D004838 3.0e-26 124.4 632 42.6
Dinv13228 Davidia involucrata HOM05D004950 ORTHO05D004838 6.7e-26 123.2 294 37.8
CSS0021212 Camellia sinensis var. sinensis HOM05D004950 ORTHO05D004838 1.1e-25 122.5 295 48.1
vmacro12982 Vaccinium macrocarpon HOM05D004950 ORTHO05D004838 1.5e-25 122.1 562 27.6
Manes.12G130350 Manihot esculenta HOM05D002324 ORTHO05D002380 2.0e-25 121.7 631 34.7
Glyma.11G241600 Glycine max HOM05D004950 ORTHO05D004838 2.6e-25 121.3 308 44.8
Oeu012397.1 Olea europaea HOM05D004950 ORTHO05D004838 1.7e-24 118.6 612 31.4
Cc07_g14660 Coffea canephora HOM05D004950 ORTHO05D004838 2.8e-24 117.9 626 44.1
Medtr3g086890 Medicago truncatula HOM05D004950 ORTHO05D004838 8.2e-24 116.3 293 47.1
ClCG07G017420 Citrullus lanatus HOM05D004950 ORTHO05D004838 1.4e-23 115.5 309 41.4
PSO675G9110 Papaver somniferum HOM05D004950 ORTHO05D004838 4.1e-23 114.0 305 33.8
Lj2C540T9 Lonicera japonica HOM05D004950 ORTHO05D004838 4.5e-22 110.5 310 34.5
Migut.L00159 Erythranthe guttata HOM05D004950 ORTHO05D004838 1.7e-21 108.6 309 44.7
PSO541G5545 Papaver somniferum HOM05D004950 ORTHO05D004838 1.7e-21 108.6 305 32.8
Ca_16511_v3 Cicer arietinum L. HOM05D004950 ORTHO05D004838 3.8e-21 107.5 302 45.4
THA.LOC104807862 Tarenaya hassleriana HOM05D004950 ORTHO05D004838 3.8e-21 107.5 324 34.9
Lalb_Chr08g0230971 Lupinus albus HOM05D004950 ORTHO05D004838 5.0e-21 107.1 580 25.9
MELO3C017599.2 Cucumis melo HOM05D004950 ORTHO05D004838 6.5e-21 106.7 315 39.4
VMungo1383G3674 Vigna mungo HOM05D004950 ORTHO05D004838 6.5e-21 106.7 304 43.8
MSTRG.3758 Avicennia marina HOM05D004950 ORTHO05D004838 8.5e-21 106.3 304 32.9
Gohir.A10G085000 Gossypium hirsutum HOM05D004950 ORTHO05D004838 1.1e-20 105.9 313 46.0
Phvul.001G253600 Phaseolus vulgaris HOM05D004950 ORTHO05D004838 1.9e-20 105.1 311 43.7
Psat2g012840 Pisum sativum HOM05D004950 ORTHO05D004838 2.5e-20 104.8 287 47.0
FvH4_1g20290 Fragaria vesca HOM05D004950 ORTHO05D004838 3.2e-20 104.4 334 38.0
Gorai.011G113500 Gossypium raimondii HOM05D004950 ORTHO05D004838 3.2e-20 104.4 313 46.0
FAN23G1536 Fragaria x ananassa HOM05D004950 ORTHO05D004838 1.2e-19 102.4 331 37.5
FAN26G1097 Fragaria x ananassa HOM05D000001 ORTHO05D004838 2.1e-19 101.7 334 37.7
RcHm_v2.0_Chr2g0112431 Rosa chinensis HOM05D004950 ORTHO05D004838 2.1e-19 101.7 310 38.7
TPR.G16026 Trifolium pratense HOM05D004950 ORTHO05D004838 6.1e-19 100.1 287 46.0
Gohir.D10G104000 Gossypium hirsutum HOM05D004950 ORTHO05D004838 8.0e-19 99.8 303 44.9
PSO302G0004 Papaver somniferum HOM05D004950 ORTHO05D004838 1.4e-18 99.0 301 30.6
unitig_32.g11809 Utricularia gibba HOM05D004950 ORTHO05D004838 1.4e-18 99.0 302 41.4
CARHR246650 Cardamine hirsuta HOM05D004950 ORTHO05D004838 3.0e-18 97.8 332 32.8
Nitab4.5_0000241g0210 Nicotiana tabacum HOM05D000288 ORTHO05D004838 4.0e-18 97.4 633 38.2
FAN28G2730 Fragaria x ananassa HOM05D004950 ORTHO05D004838 6.8e-18 96.7 752 26.5
Prupe.6G192500 Prunus persica HOM05D004950 ORTHO05D004838 6.8e-18 96.7 346 32.9
Sed0005265 Sechium edule HOM05D004950 ORTHO05D004838 1.2e-17 95.9 304 40.5
Lj6g0021918 Lotus japonicus HOM05D004950 ORTHO05D004838 1.5e-17 95.5 612 30.6
FAN19G3038 Fragaria x ananassa HOM05D004950 ORTHO05D004838 4.4e-17 94.0 728 28.0
Sc16g0000220 Simmondsia chinensis HOM05D004950 ORTHO05D004838 4.4e-17 94.0 296 32.1
GSVIVG01003422001 Vitis vinifera HOM05D000001 ORTHO05D000003 9.7e-17 92.8 648 33.2
Aa31LG6G15210 Aethionema arabicum HOM05D004950 ORTHO05D004838 2.2e-16 91.7 353 39.1
Sp7g35850 Schrenkiella parvula HOM05D004950 ORTHO05D004838 2.2e-16 91.7 356 29.2
AUR62003257 Chenopodium quinoa HOM05D004950 ORTHO05D004838 2.8e-16 91.3 628 27.4
Lj4A899T58 Lonicera japonica HOM05D004950 ORTHO05D004838 6.3e-16 90.1 579 25.4
Peaxi162Scf00383g01014 Petunia axillaris HOM05D004950 ORTHO05D004838 6.3e-16 90.1 629 35.1
AUR62027212 Chenopodium quinoa HOM05D004950 ORTHO05D004838 1.1e-15 89.4 613 30.5
CsaV3_4G004650 Cucumis sativus L. HOM05D004950 ORTHO05D004838 2.4e-15 88.2 302 36.8
CsaV3_UNG131010 Cucumis sativus L. HOM05D004950 ORTHO05D004838 2.4e-15 88.2 302 36.8
Glyma.18G015400 Glycine max HOM05D004950 ORTHO05D004838 2.4e-15 88.2 554 29.4
Nitab4.5_0006824g0010 Nicotiana tabacum HOM05D004950 ORTHO05D004838 2.4e-15 88.2 635 39.7
Thhalv10027577m.g Eutrema salsugineum HOM05D004950 ORTHO05D004838 4.1e-15 87.4 350 28.3
MBI02_g33232_MAGBIO Magnolia biondii HOM05D000219 ORTHO05D004838 5.3e-15 87.0 300 33.7
MD11G1200900 Malus domestica HOM05D004950 ORTHO05D004838 7.0e-15 86.7 360 27.5
unitig_748.g8651 Utricularia gibba HOM05D004950 ORTHO05D004838 7.0e-15 86.7 301 28.9
Carub.0007s0199 Capsella rubella HOM05D004950 ORTHO05D004838 2.0e-14 85.1 354 35.3
SalBow5G3597 Salvia bowleyana HOM05D004950 ORTHO05D004838 2.7e-14 84.7 298 40.3
DCAR_014205 Daucus carota HOM05D004950 ORTHO05D004838 1.0e-13 82.8 634 30.0
MD03G1184100 Malus domestica HOM05D004950 ORTHO05D004838 1.0e-13 82.8 360 31.4
Sed0023595 Sechium edule HOM05D004950 ORTHO05D004838 1.3e-13 82.4 303 38.3
DCAR_016618 Daucus carota HOM05D004950 ORTHO05D004838 2.9e-13 81.3 661 25.9
Nn1g05445 Nelumbo nucifera HOM05D004950 ORTHO05D004838 2.9e-13 81.3 294 34.4
AT4G40020 Arabidopsis thaliana HOM05D004950 ORTHO05D004838 3.8e-13 80.9 355 27.0
EL10As13g24047 Beta vulgaris HOM05D004950 ORTHO05D004838 3.8e-13 80.9 312 28.2
BcaNung00933 Brassica carinata HOM05D004950 ORTHO05D004838 1.1e-12 79.3 327 27.8
BolC1t00104H Brassica oleracea HOM05D004950 ORTHO05D004838 5.5e-12 77.0 337 27.0
AL7G12330 Arabidopsis lyrata HOM05D004950 ORTHO05D004838 1.6e-11 75.5 351 28.5
Ah.02g126160 Amaranthus hybridus HOM05D004950 ORTHO05D004838 3.6e-11 74.3 584 31.5
SGA_v2.0_scaffold115G32166 Striga asiatica HOM05D004950 ORTHO05D004838 3.6e-11 74.3 300 38.7
THA.LOC104824888 Tarenaya hassleriana HOM05D004950 ORTHO05D004838 3.6e-11 74.3 353 32.9
ECA238G0370 Erigeron canadensis HOM05D004950 ORTHO05D004838 4.7e-11 73.9 634 31.2
DCAR_003473 Daucus carota HOM05D004950 ORTHO05D004838 1.8e-10 72.0 571 23.5
Nitab4.5_0010702g0020 Nicotiana tabacum HOM05D000288 ORTHO05D000173 1.8e-10 72.0 126 42.1
CsaV3_UNG154160 Cucumis sativus L. HOM05D004950 ORTHO05D004838 2.3e-10 71.6 281 34.9
Peaxi162Scf00569g00049 Petunia axillaris HOM05D004950 ORTHO05D004838 2.3e-10 71.6 146 37.7
PGSC0003DMG400016153 Solanum tuberosum HOM05D004950 ORTHO05D004838 5.2e-10 70.5 291 27.5
A01p00940 Brassica napus HOM05D004950 ORTHO05D004838 6.8e-10 70.1 337 25.5
C01p01070 Brassica napus HOM05D004950 ORTHO05D004838 6.8e-10 70.1 328 25.9
BraA01t00092Z Brassica rapa HOM05D004950 ORTHO05D004838 6.8e-10 70.1 337 25.5
Sopen11g004990 Solanum pennellii HOM05D004950 ORTHO05D004838 8.8e-10 69.7 295 36.6
Actinidia28833 Actinidia chinensis HOM05D000288 ORTHO05D004838 1.2e-09 69.3 144 35.4
Nitab4.5_0000571g0050 Nicotiana tabacum HOM05D004950 ORTHO05D004838 1.2e-09 69.3 146 35.6
Rhsim10G0167200 Rhododendron simsii HOM05D004950 ORTHO05D004838 1.2e-09 69.3 295 39.0
Nitab4.5_0001874g0100 Nicotiana tabacum HOM05D004950 ORTHO05D004838 2.0e-09 68.6 156 35.9
CAN.G905.19 Capsicum annuum HOM05D004950 ORTHO05D004838 2.6e-09 68.2 296 26.4
CAN.G33.13 Capsicum annuum HOM05D004950 ORTHO05D004838 5.7e-09 67.0 149 33.6
Nitab4.5_0000128g0260 Nicotiana tabacum HOM05D000288 ORTHO05D004838 7.5e-09 66.6 109 41.3
Rhsim08G0013200 Rhododendron simsii HOM05D004950 ORTHO05D004838 2.8e-08 64.7 291 36.8
Lsat_1_v5_gn_2_66121 Lactuca sativa HOM05D004950 ORTHO05D004838 8.3e-08 63.2 301 23.9
Nn5g30016 Nelumbo nucifera HOM05D002657 ORTHO05D004838 1.8e-07 62.0 289 37.4
PGSC0003DMG400046492 Solanum tuberosum HOM05D004950 ORTHO05D004838 1.8e-07 62.0 144 36.8
CsaV3_UNG223520 Cucumis sativus L. HOM05D004950 ORTHO05D004838 4.1e-07 60.8 281 26.7
BcaNung00932 Brassica carinata HOM05D004950 ORTHO05D004838 3.5e-06 57.8 132 37.1
Ah.03g142010 Amaranthus hybridus HOM05D004950 ORTHO05D004838 7.7e-06 56.6 298 36.2


User provided reference genes

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