Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib147G0981 Durio zibethinus HOM05D007514 ORTHO05D009469 4.3e-105 384.8 213 100.0
Duzib264G0291 Durio zibethinus HOM05D007514 ORTHO05D009469 1.4e-50 203.8 171 77.2
Thecc.01G019700 Theobroma cacao HOM05D007514 ORTHO05D009469 7.7e-46 188.0 177 71.2
Gohir.A02G170200 Gossypium hirsutum HOM05D007514 ORTHO05D009469 2.0e-41 173.3 177 67.2
COL.COLO4_21918 Corchorus olitorius HOM05D007514 ORTHO05D009469 3.4e-41 172.6 172 68.0
Gorai.003G010100 Gossypium raimondii HOM05D007514 ORTHO05D009469 2.2e-40 169.9 177 66.7
Gohir.D03G009800 Gossypium hirsutum HOM05D007514 ORTHO05D009469 2.8e-40 169.5 177 66.7
Potri.005G115000 Populus trichocarpa HOM05D007514 ORTHO05D009469 6.8e-34 148.3 177 49.2
TWI09G1362 Tripterygium wilfordii HOM05D007514 ORTHO05D009469 8.3e-32 141.4 170 47.6
Cpa.g.sc6.242 Carica papaya HOM05D007514 ORTHO05D009469 1.4e-31 140.6 174 48.3
Ciclev10026620m.g Citrus clementina HOM05D007514 ORTHO05D009469 3.3e-28 129.4 169 48.5
Sabra05G0094100 Salix brachista HOM05D007514 ORTHO05D009469 2.8e-27 126.3 102 63.7
Manes.02G103801 Manihot esculenta HOM05D007514 ORTHO05D009469 2.3e-26 123.2 183 42.1
PGR119G2084 Punica granatum HOM05D007514 ORTHO05D009469 3.0e-26 122.9 175 46.9
CiPaw.07G058000 Carya illinoinensis HOM05D007514 ORTHO05D009469 2.6e-25 119.8 172 46.5
MSTRG.883 Avicennia marina HOM05D007514 ORTHO05D009469 5.7e-25 118.6 102 58.8
AUR62011597 Chenopodium quinoa HOM05D007514 ORTHO05D009469 5.7e-25 118.6 102 58.8
Oeu059507.1 Olea europaea HOM05D007514 ORTHO05D009469 7.5e-25 118.2 102 56.9
Sp3g31390 Schrenkiella parvula HOM05D007514 ORTHO05D009469 7.5e-25 118.2 169 45.0
A07p02710 Brassica napus HOM05D007514 ORTHO05D009469 3.7e-24 115.9 168 45.2
BraA07t28071Z Brassica rapa HOM05D007514 ORTHO05D009469 3.7e-24 115.9 168 45.2
Sc16g0002120 Simmondsia chinensis HOM05D007514 ORTHO05D009469 4.9e-24 115.5 102 54.9
CSS0010041 Camellia sinensis var. sinensis HOM05D007514 ORTHO05D009469 6.4e-24 115.2 99 58.6
CSS0030936 Camellia sinensis var. sinensis HOM05D007514 ORTHO05D009469 6.4e-24 115.2 99 58.6
BcaC06g36349 Brassica carinata HOM05D007514 ORTHO05D009469 1.1e-23 114.4 100 59.0
C07p05010 Brassica napus HOM05D007514 ORTHO05D009469 1.1e-23 114.4 100 59.0
BolC7t40902H Brassica oleracea HOM05D007514 ORTHO05D009469 1.1e-23 114.4 100 59.0
THA.LOC104819752 Tarenaya hassleriana HOM05D007514 ORTHO05D009469 1.1e-23 114.4 170 40.6
Cc07_g10640 Coffea canephora HOM05D007514 ORTHO05D009469 1.4e-23 114.0 103 59.2
PGSC0003DMG401003636 Solanum tuberosum HOM05D007514 ORTHO05D009469 1.4e-23 114.0 103 55.3
CARHR108460 Cardamine hirsuta HOM05D007514 ORTHO05D009469 1.8e-23 113.6 149 45.6
MD02G1133200 Malus domestica HOM05D007514 ORTHO05D009469 1.8e-23 113.6 174 43.1
QL06p032616 Quercus lobata HOM05D007514 ORTHO05D009469 1.8e-23 113.6 174 51.7
Nn6g32368 Nelumbo nucifera HOM05D007514 ORTHO05D009469 3.2e-23 112.8 173 49.1
AL3G51000 Arabidopsis lyrata HOM05D007514 ORTHO05D009469 4.1e-23 112.5 157 43.3
Thhalv10022884m.g Eutrema salsugineum HOM05D007514 ORTHO05D009469 4.1e-23 112.5 166 42.8
Hma1.2p1_0743F.1_g211610 Hydrangea macrophylla HOM05D007514 ORTHO05D009469 7.0e-23 111.7 96 59.4
AT2G17972 Arabidopsis thaliana HOM05D007514 ORTHO05D009469 9.2e-23 111.3 166 43.4
BcaB03g16581 Brassica carinata HOM05D007514 ORTHO05D009469 9.2e-23 111.3 100 57.0
Migut.L00252 Erythranthe guttata HOM05D007514 ORTHO05D009469 2.7e-22 109.8 102 57.8
Migut.L00394 Erythranthe guttata HOM05D007514 ORTHO05D009469 2.7e-22 109.8 102 57.8
Carub.0003s3210 Capsella rubella HOM05D007514 ORTHO05D009469 3.5e-22 109.4 146 44.5
Dinv33625 Davidia involucrata HOM05D007514 ORTHO05D009469 3.5e-22 109.4 98 58.2
Lsat_1_v5_gn_3_74241 Lactuca sativa HOM05D007514 ORTHO05D009469 3.5e-22 109.4 97 55.7
Prupe.7G167500 Prunus persica HOM05D007514 ORTHO05D009469 3.5e-22 109.4 106 56.6
TAR365G0263 Trochodendron aralioides HOM05D007514 ORTHO05D009469 4.6e-22 109.0 171 39.2
Ah.01g021120 Amaranthus hybridus HOM05D007514 ORTHO05D009469 7.8e-22 108.2 103 52.4
Glyma.16G128900 Glycine max HOM05D007514 ORTHO05D009469 7.8e-22 108.2 100 54.0
DCAR_016611 Daucus carota HOM05D007514 ORTHO05D009469 1.3e-21 107.5 144 43.8
unitig_26.g10012 Utricularia gibba HOM05D007514 ORTHO05D009469 1.3e-21 107.5 96 58.3
Glyma.02G048800 Glycine max HOM05D007514 ORTHO05D009469 2.3e-21 106.7 95 56.8
TAR365G1204 Trochodendron aralioides HOM05D007514 ORTHO05D009469 2.3e-21 106.7 171 38.6
Haze_03771 Corylus avellana HOM05D007514 ORTHO05D009469 3.0e-21 106.3 169 44.4
PSO541G1849 Papaver somniferum HOM05D007514 ORTHO05D009469 3.0e-21 106.3 102 53.9
PSO675G8043 Papaver somniferum HOM05D007514 ORTHO05D009469 3.0e-21 106.3 102 53.9
SGA_v2.0_scaffold234G43648 Striga asiatica HOM05D007514 ORTHO05D009469 3.0e-21 106.3 112 50.9
Aqoxy5G01772 Aquilegia oxysepala HOM05D007514 ORTHO05D009469 6.6e-21 105.1 102 52.0
Atru.chr3.793 Acer truncatum HOM05D007514 ORTHO05D009469 8.6e-21 104.8 183 50.8
Ca_22373_v3 Cicer arietinum L. HOM05D007514 ORTHO05D009469 8.6e-21 104.8 96 57.3
Aa31LG8G15140 Aethionema arabicum HOM05D007514 ORTHO05D009469 1.1e-20 104.4 100 57.0
MBI05_g15346_MAGBIO Magnolia biondii HOM05D007514 ORTHO05D009469 1.5e-20 104.0 96 51.0
TPR.G30050 Trifolium pratense HOM05D007514 ORTHO05D009469 1.9e-20 103.6 97 60.8
VMungo0251G0111 Vigna mungo HOM05D007514 ORTHO05D009469 2.5e-20 103.2 100 53.0
Cfa006967 Carpinus fangiana HOM05D007514 ORTHO05D009469 3.3e-20 102.8 169 50.9
Lj4g0013490 Lotus japonicus HOM05D007514 ORTHO05D009469 3.3e-20 102.8 173 49.1
HPP92_025365 Vanilla planifolia HOM05D007514 ORTHO05D009469 4.3e-20 102.4 101 49.5
Lj2P467T19 Lonicera japonica HOM05D007514 ORTHO05D009469 3.6e-19 99.4 87 58.6
Lalb_Chr05g0229901 Lupinus albus HOM05D007514 ORTHO05D009469 3.6e-19 99.4 87 60.9
Medtr8g075960 Medicago truncatula HOM05D007514 ORTHO05D009469 6.2e-19 98.6 89 62.9
Nitab4.5_0001959g0010 Nicotiana tabacum HOM05D007514 ORTHO05D009469 6.2e-19 98.6 69 68.1
FAN26G2491 Fragaria x ananassa HOM05D007514 ORTHO05D009469 8.0e-19 98.2 73 67.1
Phvul.003G262200 Phaseolus vulgaris HOM05D007514 ORTHO05D009469 8.0e-19 98.2 101 51.5
Nitab4.5_0006286g0070 Nicotiana tabacum HOM05D007514 ORTHO05D009469 1.4e-18 97.4 69 66.7
Psat4g099040 Pisum sativum HOM05D007514 ORTHO05D009469 1.4e-18 97.4 100 51.0
FvH4_1g11940 Fragaria vesca HOM05D007514 ORTHO05D009469 1.8e-18 97.1 75 65.3
FAN19G0235 Fragaria x ananassa HOM05D007514 ORTHO05D009469 1.8e-18 97.1 75 65.3
CsaV3_6G047030 Cucumis sativus L. HOM05D007514 ORTHO05D009469 2.3e-18 96.7 183 39.3
FAN28G1094 Fragaria x ananassa HOM05D007514 ORTHO05D009469 2.3e-18 96.7 90 55.6
ClCG01G020240 Citrullus lanatus HOM05D007514 ORTHO05D009469 4.0e-18 95.9 85 58.8
FAN23G2896 Fragaria x ananassa HOM05D007514 ORTHO05D009469 4.0e-18 95.9 73 65.8
MELO3C007896.2 Cucumis melo HOM05D007514 ORTHO05D009469 5.2e-18 95.5 83 57.8
CANSAT01G2848 Cannabis sativa HOM05D007514 ORTHO05D009469 6.8e-18 95.1 82 61.0
Peaxi162Scf00083g00065 Petunia axillaris HOM05D007514 ORTHO05D009469 6.8e-18 95.1 69 65.2
Sopen02g028770 Solanum pennellii HOM05D007514 ORTHO05D009469 2.0e-17 93.6 74 62.2
arahy.Tifrunner.gnm1.ann1.EYR4CZ Arachis hypogaea HOM05D007514 ORTHO05D009469 2.6e-17 93.2 58 74.1
arahy.Tifrunner.gnm1.ann1.JXSY0Y Arachis hypogaea HOM05D007514 ORTHO05D009469 2.6e-17 93.2 58 74.1
Rhsim08G0034000 Rhododendron simsii HOM05D007514 ORTHO05D009469 4.4e-17 92.4 94 52.1
Sed0026037 Sechium edule HOM05D007514 ORTHO05D009469 9.8e-17 91.3 167 37.7
Zm00001eb228020 Zea mays HOM05D007514 ORTHO05D009469 2.9e-16 89.7 59 67.8
EL10Ac9g21968 Beta vulgaris HOM05D007514 ORTHO05D009469 3.7e-16 89.4 59 66.1
Os06g0715200 Oryza sativa ssp. japonica HOM05D007514 ORTHO05D009469 3.7e-16 89.4 62 66.1
arahy.Tifrunner.gnm1.ann1.KXHU4R Arachis hypogaea HOM05D007514 ORTHO05D009469 1.2e-14 84.3 58 70.7
Mapoly0011s0103 Marchantia polymorpha HOM05D007514 ORTHO05D009469 2.7e-14 83.2 59 64.4
CAN.G66.6 Capsicum annuum HOM05D007514 ORTHO05D009469 3.5e-14 82.8 78 53.8
Pp3c15_14110 Physcomitrium patens HOM05D007514 ORTHO05D009469 6.0e-14 82.0 84 52.4
SMO353G0320 Selaginella moellendorffii HOM05D007514 ORTHO05D009469 1.7e-13 80.5 100 45.0
SEGI_16775 Sequoiadendron giganteum HOM05D007514 ORTHO05D009469 1.5e-12 77.4 88 47.7
AagrBONN_evm.TU.Sc2ySwM_344.4071 Anthoceros agrestis HOM05D007514 ORTHO05D009469 2.5e-12 76.6 94 41.5
Cre05.g245102 Chlamydomonas reinhardtii HOM05D007514 ORTHO05D009469 2.2e-08 63.5 78 39.7


User provided reference genes

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