Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib147G0922 Durio zibethinus HOM05D004095 ORTHO05D003197 6.9e-171 604.0 325 100.0
Duzib264G0091 Durio zibethinus HOM05D004095 ORTHO05D003197 2.6e-125 452.6 328 80.8
Duzib187G0006 Durio zibethinus HOM05D004095 ORTHO05D003197 2.3e-118 429.5 326 76.1
Gorai.003G007900 Gossypium raimondii HOM05D004095 ORTHO05D003197 5.2e-110 401.7 326 70.9
COL.COLO4_22466 Corchorus olitorius HOM05D004095 ORTHO05D003197 3.1e-107 392.5 326 65.6
Gohir.A02G172400 Gossypium hirsutum HOM05D004095 ORTHO05D003197 4.0e-102 375.6 326 68.4
Gohir.D03G007700 Gossypium hirsutum HOM05D004095 ORTHO05D003197 7.5e-101 371.3 326 68.4
Gorai.008G131100 Gossypium raimondii HOM05D004095 ORTHO05D003197 9.2e-83 311.2 270 61.9
Atru.chr3.863_Atru.chr3.864 Acer truncatum HOM05D004095 ORTHO05D003197 1.2e-79 300.8 366 53.3
Cfa007004 Carpinus fangiana HOM05D004095 ORTHO05D003197 1.2e-77 294.3 325 58.2
Haze_03728 Corylus avellana HOM05D004095 ORTHO05D003197 1.8e-62 243.8 424 43.6
Gorai.008G208400 Gossypium raimondii HOM05D004095 ORTHO05D003197 3.9e-57 226.1 169 66.3
TAR376G0784 Trochodendron aralioides HOM05D004095 ORTHO05D003197 8.7e-57 224.9 335 47.8
Gohir.D12G193466 Gossypium hirsutum HOM05D004095 ORTHO05D003197 1.5e-56 224.2 175 63.4
Prupe.7G171900 Prunus persica HOM05D004095 ORTHO05D003197 7.9e-50 201.8 406 38.2
Eucgr.I02328 Eucalyptus grandis HOM05D004095 ORTHO05D003197 1.3e-49 201.1 327 44.6
Ciclev10025767m.g Citrus clementina HOM05D004095 ORTHO05D003197 5.1e-49 199.1 366 41.5
THA.LOC104804274 Tarenaya hassleriana HOM05D004095 ORTHO05D003197 2.9e-44 183.3 357 43.1
THA.LOC104807504 Tarenaya hassleriana HOM05D004095 ORTHO05D003197 1.4e-43 181.0 351 42.7
Nn6g31993 Nelumbo nucifera HOM05D004095 ORTHO05D003197 5.5e-43 179.1 339 41.3
TAR381G0731 Trochodendron aralioides HOM05D004095 ORTHO05D003197 1.8e-41 174.1 347 40.6
CARHR244340 Cardamine hirsuta HOM05D004095 ORTHO05D003197 3.0e-41 173.3 354 44.4
TAR628G1526 Trochodendron aralioides HOM05D004095 ORTHO05D003197 2.8e-39 166.8 380 39.5
GSVIVG01018727001 Vitis vinifera HOM05D004095 ORTHO05D003197 2.8e-39 166.8 182 64.3
Dinv31870 Davidia involucrata HOM05D004095 ORTHO05D003197 9.0e-38 161.8 335 44.8
CSS0006390 Camellia sinensis var. sinensis HOM05D004095 ORTHO05D003197 3.0e-33 146.7 337 39.5
A03p63990 Brassica napus HOM05D004095 ORTHO05D003197 1.9e-32 144.1 375 39.7
PSO675G0587 Papaver somniferum HOM05D004095 ORTHO05D003197 1.9e-32 144.1 352 36.1
CSS0032179 Camellia sinensis var. sinensis HOM05D004095 ORTHO05D003197 2.5e-32 143.7 342 39.8
BraA03t15466Z Brassica rapa HOM05D004095 ORTHO05D003197 1.3e-31 141.4 377 38.7
BcaNung05051 Brassica carinata HOM05D004095 ORTHO05D003197 2.4e-30 137.1 364 36.8
Carub.0007s0428 Capsella rubella HOM05D004095 ORTHO05D003197 4.1e-30 136.3 362 40.1
CiPaw.07G146700 Carya illinoinensis HOM05D004095 ORTHO05D003197 2.6e-29 133.7 333 35.4
FAN19G1292 Fragaria x ananassa HOM05D024588 ORTHO05D003197 3.4e-29 133.3 170 57.1
PSO541G2818 Papaver somniferum HOM05D004095 ORTHO05D003197 4.5e-29 132.9 340 37.4
Aqoxy5G01820 Aquilegia oxysepala HOM05D004095 ORTHO05D003197 5.9e-29 132.5 345 39.7
QL11p050200 Quercus lobata HOM05D004095 ORTHO05D003197 1.3e-28 131.3 330 37.6
Cc10_g01420 Coffea canephora HOM05D004095 ORTHO05D003197 4.2e-27 126.3 339 36.6
Lj4A21T58 Lonicera japonica HOM05D004095 ORTHO05D003197 7.2e-27 125.6 363 40.2
TWI12G1115 Tripterygium wilfordii HOM05D004095 ORTHO05D003197 9.4e-27 125.2 334 38.3
AT4G35940 Arabidopsis thaliana HOM05D004095 ORTHO05D003197 1.2e-26 124.8 405 36.5
MSTRG.1174 Avicennia marina HOM05D004095 ORTHO05D003197 1.2e-26 124.8 346 38.7
MSTRG.25264 Avicennia marina HOM05D004095 ORTHO05D003197 2.1e-26 124.0 370 37.6
AL7G15100 Arabidopsis lyrata HOM05D004095 ORTHO05D003197 2.7e-26 123.6 373 38.3
Manes.18G010907 Manihot esculenta HOM05D004095 ORTHO05D003197 2.7e-26 123.6 345 31.6
Oeu061977.1 Olea europaea HOM05D004095 ORTHO05D003197 1.0e-25 121.7 356 36.5
Haze_22667 Corylus avellana HOM05D004095 ORTHO05D003197 1.4e-25 121.3 334 38.3
PSO700G0117 Papaver somniferum HOM05D004095 ORTHO05D003197 3.0e-25 120.2 355 36.3
BcaB07g31703 Brassica carinata HOM05D004095 ORTHO05D003197 8.8e-25 118.6 341 36.1
PSO170G2543 Papaver somniferum HOM05D004095 ORTHO05D003197 8.8e-25 118.6 356 36.2
Sp7g33720 Schrenkiella parvula HOM05D004095 ORTHO05D003197 8.8e-25 118.6 373 37.8
Aa31LG6G12890 Aethionema arabicum HOM05D004095 ORTHO05D003197 1.1e-24 118.2 363 39.4
Potri.002G019200 Populus trichocarpa HOM05D004095 ORTHO05D003197 1.1e-24 118.2 329 33.1
CAN.G311.49 Capsicum annuum HOM05D004095 ORTHO05D003197 1.5e-24 117.9 343 35.0
C01p03060 Brassica napus HOM05D004095 ORTHO05D003197 3.3e-24 116.7 352 36.4
Nn5g30782 Nelumbo nucifera HOM05D004095 ORTHO05D003197 7.4e-24 115.5 336 37.5
PGR119G1825 Punica granatum HOM05D004095 ORTHO05D003197 9.7e-24 115.2 216 46.3
C07p61450 Brassica napus HOM05D004095 ORTHO05D003197 1.7e-23 114.4 366 35.5
BolC7t46570H Brassica oleracea HOM05D004095 ORTHO05D003197 3.7e-23 113.2 378 35.4
Oeu026642.1 Olea europaea HOM05D004095 ORTHO05D003197 4.8e-23 112.8 396 31.1
PGSC0003DMG400009946 Solanum tuberosum HOM05D004095 ORTHO05D003197 6.3e-23 112.5 342 35.7
AT2G17787 Arabidopsis thaliana HOM05D004095 ORTHO05D003197 2.4e-22 110.5 353 34.0
BcaNung00778 Brassica carinata HOM05D004095 ORTHO05D003197 3.1e-22 110.2 349 39.0
CARHR108180 Cardamine hirsuta HOM05D004095 ORTHO05D003197 3.1e-22 110.2 328 34.1
A09p11580 Brassica napus HOM05D004095 ORTHO05D003197 6.9e-22 109.0 346 30.6
BolC1t00292H Brassica oleracea HOM05D004095 ORTHO05D003197 6.9e-22 109.0 345 37.4
Duzib041G0318 Durio zibethinus HOM05D004095 ORTHO05D003197 6.9e-22 109.0 327 31.8
Solyc04g081730.3 Solanum lycopersicum HOM05D004095 ORTHO05D003197 1.2e-21 108.2 343 35.6
Potri.005G242400 Populus trichocarpa HOM05D004095 ORTHO05D003197 2.0e-21 107.5 334 31.4
TWI36G1615 Tripterygium wilfordii HOM05D004095 ORTHO05D003197 3.4e-21 106.7 263 36.5
MD02G1126500 Malus domestica HOM05D004095 ORTHO05D003197 7.7e-21 105.5 387 27.6
BraA07t28113Z Brassica rapa HOM05D004095 ORTHO05D003197 1.0e-20 105.1 343 32.4
BraA09t36805Z Brassica rapa HOM05D004095 ORTHO05D003197 1.3e-20 104.8 339 34.2
BcaC06g36322 Brassica carinata HOM05D004095 ORTHO05D003197 2.2e-20 104.0 344 35.2
Peaxi162Scf00860g00422 Petunia axillaris HOM05D004095 ORTHO05D003197 2.2e-20 104.0 337 32.6
Sopen04g035350 Solanum pennellii HOM05D004095 ORTHO05D003197 2.2e-20 104.0 342 35.4
SGA_v2.0_scaffold19G08554 Striga asiatica HOM05D004095 ORTHO05D003197 2.2e-20 104.0 350 35.4
A01p02760 Brassica napus HOM05D004095 ORTHO05D003197 2.9e-20 103.6 348 37.9
FvH4_1g11400 Fragaria vesca HOM05D024588 ORTHO05D003197 2.9e-20 103.6 170 51.8
C09p13630 Brassica napus HOM05D004095 ORTHO05D003197 8.5e-20 102.1 350 34.6
Sabra02G0015500 Salix brachista HOM05D004095 ORTHO05D003197 1.9e-19 100.9 247 34.4
Thhalv10022767m.g Eutrema salsugineum HOM05D004095 ORTHO05D003197 2.5e-19 100.5 376 32.4
A07p03170 Brassica napus HOM05D004095 ORTHO05D003197 3.2e-19 100.1 335 33.4
RcHm_v2.0_Chr2g0098961 Rosa chinensis HOM05D024588 ORTHO05D003197 3.2e-19 100.1 171 50.3
BraA01t00262Z Brassica rapa HOM05D004095 ORTHO05D003197 4.2e-19 99.8 367 37.3
CiPaw.08G067700 Carya illinoinensis HOM05D004095 ORTHO05D003197 5.5e-19 99.4 328 33.2
SalBow7G2790 Salvia bowleyana HOM05D004095 ORTHO05D003197 5.5e-19 99.4 389 33.4
MELO3C011353.2 Cucumis melo HOM05D004095 ORTHO05D003197 1.2e-18 98.2 343 32.4
Actinidia15439 Actinidia chinensis HOM05D004095 ORTHO05D003197 2.1e-18 97.4 183 50.8
Lj4A799T84 Lonicera japonica HOM05D004095 ORTHO05D003197 2.1e-18 97.4 328 33.5
SHI08550 Sapria himalayana HOM05D003189 ORTHO05D003449 2.1e-18 97.4 275 32.4
Thecc.02G059700 Theobroma cacao HOM05D015147 ORTHO05D003197 2.7e-18 97.1 431 27.1
MSTRG.22345 Avicennia marina HOM05D004095 ORTHO05D003197 3.6e-18 96.7 344 35.2
CSS0036757 Camellia sinensis var. sinensis HOM05D004095 ORTHO05D003197 3.6e-18 96.7 305 33.1
vmacro07570 Vaccinium macrocarpon HOM05D004095 ORTHO05D003197 3.6e-18 96.7 389 35.5
SGA_v2.0_scaffold11G05941 Striga asiatica HOM05D004095 ORTHO05D003197 6.1e-18 95.9 339 34.2
Carub.0003s3193 Capsella rubella HOM05D004095 ORTHO05D003197 7.9e-18 95.5 370 29.5
Thhalv10027062m.g Eutrema salsugineum HOM05D004095 ORTHO05D003197 7.9e-18 95.5 307 33.2
Sabra05G0187500 Salix brachista HOM05D004095 ORTHO05D003197 7.9e-18 95.5 263 34.2
Ciclev10002009m.g Citrus clementina HOM05D004095 ORTHO05D003197 1.8e-17 94.4 328 32.6
BcaC04g22942 Brassica carinata HOM05D004095 ORTHO05D003197 3.9e-17 93.2 350 30.6
C07p05400 Brassica napus HOM05D004095 ORTHO05D003197 3.9e-17 93.2 371 33.2
Actinidia17001 Actinidia chinensis HOM05D004095 ORTHO05D003197 5.2e-17 92.8 272 37.1
Sed0017695 Sechium edule HOM05D004095 ORTHO05D003197 5.2e-17 92.8 334 34.1
CsaV3_2G024280 Cucumis sativus L. HOM05D004095 ORTHO05D003197 6.7e-17 92.4 347 32.9
Migut.C00862 Erythranthe guttata HOM05D004095 ORTHO05D003197 6.7e-17 92.4 369 33.3
Hma1.2p1_0023F.1_g015650 Hydrangea macrophylla HOM05D004095 ORTHO05D003197 8.8e-17 92.0 237 32.1
Sc15g0004790 Simmondsia chinensis HOM05D004095 ORTHO05D003197 8.8e-17 92.0 363 34.7
AL3G50810 Arabidopsis lyrata HOM05D004095 ORTHO05D003197 2.6e-16 90.5 353 29.5
arahy.Tifrunner.gnm1.ann1.I59WU7 Arachis hypogaea HOM05D004095 ORTHO05D003197 2.6e-16 90.5 332 33.1
BolC7t40940H Brassica oleracea HOM05D004095 ORTHO05D003197 2.6e-16 90.5 371 32.9
ClCG08G014140 Citrullus lanatus HOM05D004095 ORTHO05D003197 2.6e-16 90.5 337 34.4
Gohir.D01G096700 Gossypium hirsutum HOM05D004095 ORTHO05D003197 2.6e-16 90.5 327 31.8
Lalb_Chr08g0246191 Lupinus albus HOM05D004095 ORTHO05D003197 4.4e-16 89.7 336 36.6
Potri.009G134800 Populus trichocarpa HOM05D015147 ORTHO05D003197 4.4e-16 89.7 334 32.6
Gorai.002G122400 Gossypium raimondii HOM05D004095 ORTHO05D003197 5.7e-16 89.4 228 31.1
Gohir.A01G110100 Gossypium hirsutum HOM05D004095 ORTHO05D003197 7.4e-16 89.0 327 31.5
Cfa013982 Carpinus fangiana HOM05D004095 ORTHO05D003197 9.7e-16 88.6 330 32.7
Sed0007913 Sechium edule HOM05D004095 ORTHO05D003197 9.7e-16 88.6 351 28.2
Duzib093G1456 Durio zibethinus HOM05D004095 ORTHO05D003197 1.3e-15 88.2 332 29.2
Nitab4.5_0006505g0050 Nicotiana tabacum HOM05D004095 ORTHO05D003197 2.2e-15 87.4 372 33.9
Thecc.08G047900 Theobroma cacao HOM05D004095 ORTHO05D003197 2.8e-15 87.0 328 31.1
Cfa005239 Carpinus fangiana HOM05D004095 ORTHO05D003197 4.8e-15 86.3 329 28.6
Oeu007365.1 Olea europaea HOM05D004095 ORTHO05D003197 8.2e-15 85.5 257 35.0
arahy.Tifrunner.gnm1.ann1.VNIF6J Arachis hypogaea HOM05D004095 ORTHO05D003197 1.1e-14 85.1 332 32.5
CAN.G1517.6 Capsicum annuum HOM05D004095 ORTHO05D003197 1.8e-14 84.3 335 33.7
Aqoxy6G02168 Aquilegia oxysepala HOM05D004095 ORTHO05D003197 2.4e-14 84.0 333 33.6
unitig_749.g13901 Utricularia gibba HOM05D004095 ORTHO05D003197 2.4e-14 84.0 344 30.8
COL.COLO4_26117 Corchorus olitorius HOM05D004095 ORTHO05D003197 3.1e-14 83.6 240 29.6
DCAR_009498 Daucus carota HOM05D004095 ORTHO05D003197 3.1e-14 83.6 381 32.5
MBI05_g23379_MAGBIO Magnolia biondii HOM05D004095 ORTHO05D003197 4.1e-14 83.2 180 46.7
PGSC0003DMG400029333 Solanum tuberosum HOM05D004095 ORTHO05D003197 5.3e-14 82.8 335 32.2
Haze_02143 Corylus avellana HOM05D015147 ORTHO05D003197 7.0e-14 82.4 346 30.1
Lj5g0025072 Lotus japonicus HOM05D004095 ORTHO05D003197 7.0e-14 82.4 332 31.3
AUR62040566 Chenopodium quinoa HOM05D004095 ORTHO05D003197 1.6e-13 81.3 360 29.4
Lsat_1_v5_gn_8_29800 Lactuca sativa HOM05D004095 ORTHO05D003197 2.0e-13 80.9 184 44.6
QL02p012206 Quercus lobata HOM05D004095 ORTHO05D003197 2.0e-13 80.9 381 26.0
Dinv39538 Davidia involucrata HOM05D004095 ORTHO05D003197 1.3e-12 78.2 134 56.7
EL10Ac3g06641 Beta vulgaris HOM05D004095 ORTHO05D003197 2.9e-12 77.0 401 27.4
GSVIVG01024025001 Vitis vinifera HOM05D004095 ORTHO05D003197 3.8e-12 76.6 335 29.0
Aa31LG7G4540 Aethionema arabicum HOM05D008819 ORTHO05D003197 5.0e-12 76.3 338 26.6
Prupe.1G362500 Prunus persica HOM05D004095 ORTHO05D003197 5.0e-12 76.3 358 26.3
PGR031G2559 Punica granatum HOM05D004095 ORTHO05D003197 5.0e-12 76.3 339 33.3
Cpa.g.sc26.299 Carica papaya HOM05D004095 ORTHO05D003197 8.5e-12 75.5 86 41.9
Hund01666 Selenicereus undatus HOM05D004095 ORTHO05D003197 3.2e-11 73.6 364 33.0
Migut.O00908 Erythranthe guttata HOM05D004095 ORTHO05D003197 4.2e-11 73.2 327 26.6
AUR62041467 Chenopodium quinoa HOM05D004095 ORTHO05D003197 7.2e-11 72.4 392 32.7
FAN23G2095 Fragaria x ananassa HOM05D024588 ORTHO05D003197 7.2e-11 72.4 82 56.1
Gorai.009G193100 Gossypium raimondii HOM05D004095 ORTHO05D003197 2.1e-10 70.9 331 29.3
Duzib052G0919 Durio zibethinus HOM05D015147 ORTHO05D003197 3.6e-10 70.1 390 25.6
Gohir.A05G185000 Gossypium hirsutum HOM05D004095 ORTHO05D003197 4.7e-10 69.7 326 26.7
Gohir.D05G187800 Gossypium hirsutum HOM05D004095 ORTHO05D003197 2.3e-09 67.4 331 24.8
MD15G1242200 Malus domestica HOM05D024588 ORTHO05D003197 3.0e-09 67.0 66 59.1
CiPaw.06G122100 Carya illinoinensis HOM05D029580 ORTHO05D028671 5.2e-09 66.2 286 32.2
CDE02G0850 Ceratophyllum demersum HOM05D033134 ORTHO05D034264 1.5e-08 64.7 343 30.0
Prupe.1G362800 Prunus persica HOM05D004095 ORTHO05D003197 1.5e-08 64.7 267 28.1
HanXRQChr13g0387151 Helianthus annuus HOM05D004095 ORTHO05D003197 2.6e-08 63.9 173 40.5
FAN20G0678 Fragaria x ananassa HOM05D004095 ORTHO05D003197 3.3e-08 63.5 352 28.7
Aa31LG4G6060 Aethionema arabicum HOM05D008819 ORTHO05D003197 4.4e-08 63.2 347 30.5
HPP92_007327 Vanilla planifolia HOM05D004095 ORTHO05D003197 4.4e-08 63.2 340 24.4
Actinidia03180 Actinidia chinensis HOM05D004095 ORTHO05D003197 5.7e-08 62.8 275 27.6
Migut.N03174 Erythranthe guttata HOM05D004095 ORTHO05D003197 5.7e-08 62.8 327 26.3
FvH4_2g38160 Fragaria vesca HOM05D004095 ORTHO05D003197 5.7e-08 62.8 340 29.4
Peaxi162Scf00064g00737 Petunia axillaris HOM05D004095 ORTHO05D003197 9.7e-08 62.0 283 32.9
Eucgr.H00956 Eucalyptus grandis HOM05D066110 ORTHO05D003197 1.7e-07 61.2 348 30.7
RcHm_v2.0_Chr6g0303321 Rosa chinensis HOM05D004095 ORTHO05D003197 2.2e-07 60.8 338 28.4
FAN15G2156 Fragaria x ananassa HOM05D004095 ORTHO05D003197 3.7e-07 60.1 348 28.2
COL.COLO4_17333 Corchorus olitorius HOM05D015147 ORTHO05D003197 6.3e-07 59.3 110 35.5
HanXRQChr12g0366821 Helianthus annuus HOM05D004095 ORTHO05D003197 6.3e-07 59.3 397 27.5
Potri.005G242300 Populus trichocarpa HOM05D004095 ORTHO05D003197 8.2e-07 58.9 332 26.5
CANSAT11G2253 Cannabis sativa HOM05D004095 ORTHO05D003197 1.1e-06 58.5 80 38.8
FAN27G1813 Fragaria x ananassa HOM05D004095 ORTHO05D003197 1.4e-06 58.2 334 28.7
Thecc.02G060400 Theobroma cacao HOM05D015147 ORTHO05D003197 1.4e-06 58.2 102 35.3
BraA06t24727Z Brassica rapa HOM05D008819 ORTHO05D003197 1.8e-06 57.8 340 23.8
MD15G1242000 Malus domestica HOM05D004095 ORTHO05D003197 1.8e-06 57.8 29 82.8
unitig_747.g21527 Utricularia gibba HOM05D002344 ORTHO05D002954 3.1e-06 57.0 216 35.6
A07p41430 Brassica napus HOM05D008819 ORTHO05D003197 5.3e-06 56.2 240 28.3
Thhalv10008464m.g Eutrema salsugineum HOM05D008819 ORTHO05D003197 5.3e-06 56.2 330 23.9
BolC6t40021H Brassica oleracea HOM05D008819 ORTHO05D003197 7.0e-06 55.8 241 27.0
TPR.G38526 Trifolium pratense HOM05D004095 ORTHO05D003197 7.0e-06 55.8 77 37.7
GSVIVG01009951001 Vitis vinifera HOM05D004095 ORTHO05D003197 7.0e-06 55.8 172 41.9


User provided reference genes

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