Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib147G0846 Durio zibethinus HOM05D003374 ORTHO05D009415 2.9e-72 275.0 127 100.0
Duzib147G1310 Durio zibethinus HOM05D003374 ORTHO05D009415 1.4e-71 272.7 127 99.2
Thecc.01G011400 Theobroma cacao HOM05D003374 ORTHO05D009415 4.0e-66 254.6 127 92.1
COL.COLO4_22496 Corchorus olitorius HOM05D003374 ORTHO05D009415 3.4e-65 251.5 127 89.8
CsaV3_3G000500 Cucumis sativus L. HOM05D003374 ORTHO05D009415 2.3e-61 238.8 127 83.5
CiPaw.13G118300 Carya illinoinensis HOM05D003374 ORTHO05D009415 1.9e-60 235.7 127 82.7
Oeu022072.1 Olea europaea HOM05D003374 ORTHO05D009415 9.5e-60 233.4 127 81.1
Manes.01G150900 Manihot esculenta HOM05D003374 ORTHO05D009415 1.6e-59 232.6 127 83.5
CiPaw.08G125700 Carya illinoinensis HOM05D003374 ORTHO05D009415 3.6e-59 231.5 127 81.9
Gorai.003G005800 Gossypium raimondii HOM05D003374 ORTHO05D009415 4.7e-59 231.1 127 81.1
Oeu050858.1 Olea europaea HOM05D003374 ORTHO05D009415 8.1e-59 230.3 127 78.7
TAR376G1073 Trochodendron aralioides HOM05D003374 ORTHO05D009415 8.1e-59 230.3 127 81.9
Gohir.A02G174400 Gossypium hirsutum HOM05D003374 ORTHO05D009415 1.8e-58 229.2 127 81.1
Gohir.D03G005400 Gossypium hirsutum HOM05D003374 ORTHO05D009415 5.2e-58 227.6 127 79.5
Cpa.g.sc6.314 Carica papaya HOM05D003374 ORTHO05D009415 8.9e-58 226.9 126 79.4
Nn6g31909 Nelumbo nucifera HOM05D003374 ORTHO05D009415 1.5e-57 226.1 126 80.2
Atru.chr3.908 Acer truncatum HOM05D003374 ORTHO05D009415 2.6e-57 225.3 127 78.7
GSVIVG01005194001 Vitis vinifera HOM05D003374 ORTHO05D009415 2.6e-57 225.3 123 80.5
Haze_03703 Corylus avellana HOM05D003374 ORTHO05D009415 3.4e-57 224.9 126 80.2
Rhsim10G0205600 Rhododendron simsii HOM05D003374 ORTHO05D009415 3.4e-57 224.9 127 78.7
Sabra05G0088200 Salix brachista HOM05D003374 ORTHO05D009415 5.8e-57 224.2 127 80.3
Ah.03g134290 Amaranthus hybridus HOM05D003374 ORTHO05D009415 7.6e-57 223.8 127 78.7
Ca_24943_v3 Cicer arietinum L. HOM05D003374 ORTHO05D009415 7.6e-57 223.8 124 77.4
TWI73G0214 Tripterygium wilfordii HOM05D003374 ORTHO05D009415 7.6e-57 223.8 125 77.6
Medtr5g022990 Medicago truncatula HOM05D003374 ORTHO05D009415 9.9e-57 223.4 127 77.2
Cc07_g11320 Coffea canephora HOM05D003374 ORTHO05D009415 1.3e-56 223.0 127 78.7
Cc08_g04870 Coffea canephora HOM05D003374 ORTHO05D009415 1.3e-56 223.0 127 78.7
QL06p052083 Quercus lobata HOM05D003374 ORTHO05D009415 1.7e-56 222.6 124 78.2
Glyma.11G081000 Glycine max HOM05D003374 ORTHO05D009415 2.9e-56 221.9 124 77.4
Potri.005G107700 Populus trichocarpa HOM05D003374 ORTHO05D009415 2.9e-56 221.9 127 80.3
Sopen02g028140 Solanum pennellii HOM05D003374 ORTHO05D009415 4.9e-56 221.1 127 78.0
Cfa007030 Carpinus fangiana HOM05D003374 ORTHO05D009415 6.4e-56 220.7 123 80.5
Dinv40145 Davidia involucrata HOM05D003374 ORTHO05D009415 8.4e-56 220.3 113 85.8
PGSC0003DMG400003664 Solanum tuberosum HOM05D003374 ORTHO05D009415 8.4e-56 220.3 127 78.0
CANSAT25G2243 Cannabis sativa HOM05D003374 ORTHO05D009415 1.1e-55 219.9 127 77.2
Ciclev10026501m.g Citrus clementina HOM05D003374 ORTHO05D009415 1.4e-55 219.5 127 76.4
Solyc02g083360.1 Solanum lycopersicum HOM05D003374 ORTHO05D009415 1.4e-55 219.5 127 77.2
Aqoxy6G01987 Aquilegia oxysepala HOM05D003374 ORTHO05D009415 2.4e-55 218.8 127 78.7
CSS0011665 Camellia sinensis var. sinensis HOM05D003374 ORTHO05D009415 3.2e-55 218.4 127 78.0
CAN.G890.27 Capsicum annuum HOM05D003374 ORTHO05D009415 5.4e-55 217.6 127 77.2
PSO541G5712 Papaver somniferum HOM05D003374 ORTHO05D009415 7.1e-55 217.2 127 78.0
Sc16g0001810 Simmondsia chinensis HOM05D003374 ORTHO05D009415 7.1e-55 217.2 127 76.4
DCAR_014045 Daucus carota HOM05D003374 ORTHO05D009415 9.2e-55 216.9 126 76.2
Lsat_1_v5_gn_2_75400 Lactuca sativa HOM05D003374 ORTHO05D009415 1.2e-54 216.5 127 76.4
Migut.C00507 Erythranthe guttata HOM05D003374 ORTHO05D009415 2.7e-54 215.3 126 73.8
SGA_v2.0_scaffold16G07586 Striga asiatica HOM05D003374 ORTHO05D009415 2.7e-54 215.3 127 75.6
TPR.G25106 Trifolium pratense HOM05D003374 ORTHO05D009415 3.5e-54 214.9 124 75.8
TAR625G1333 Trochodendron aralioides HOM05D003374 ORTHO05D009415 6.0e-54 214.2 121 79.3
Eucgr.J02491 Eucalyptus grandis HOM05D003374 ORTHO05D009415 7.8e-54 213.8 127 74.0
Lj2g0014685 Lotus japonicus HOM05D003374 ORTHO05D009415 7.8e-54 213.8 125 74.4
MD02G1123500 Malus domestica HOM05D003374 ORTHO05D009415 7.8e-54 213.8 126 74.6
SalBow7G1184 Salvia bowleyana HOM05D003374 ORTHO05D009415 7.8e-54 213.8 127 75.6
CSS0020449 Camellia sinensis var. sinensis HOM05D003374 ORTHO05D009415 1.0e-53 213.4 127 76.4
THA.LOC104807515 Tarenaya hassleriana HOM05D003374 ORTHO05D009415 1.7e-53 212.6 126 74.6
PSO675G5709 Papaver somniferum HOM05D003374 ORTHO05D009415 2.3e-53 212.2 127 77.2
Prupe.7G175100 Prunus persica HOM05D003374 ORTHO05D009415 3.9e-53 211.5 122 75.4
Sp3g31110 Schrenkiella parvula HOM05D003374 ORTHO05D009415 3.9e-53 211.5 125 76.0
AL3G50700 Arabidopsis lyrata HOM05D003374 ORTHO05D009415 5.1e-53 211.1 125 74.4
Lalb_Chr05g0212171 Lupinus albus HOM05D003374 ORTHO05D009415 5.1e-53 211.1 124 74.2
CSS0026426 Camellia sinensis var. sinensis HOM05D003374 ORTHO05D009415 8.7e-53 210.3 112 82.1
Phvul.002G104600 Phaseolus vulgaris HOM05D003374 ORTHO05D009415 8.7e-53 210.3 124 74.2
BcaC06g36302 Brassica carinata HOM05D003374 ORTHO05D009415 1.5e-52 209.5 125 73.6
AT2G17705 Arabidopsis thaliana HOM05D003374 ORTHO05D009415 1.9e-52 209.1 126 73.0
C07p05590 Brassica napus HOM05D003374 ORTHO05D009415 1.9e-52 209.1 125 73.6
CARHR107990 Cardamine hirsuta HOM05D003374 ORTHO05D009415 4.3e-52 208.0 125 73.6
BcaB03g16543 Brassica carinata HOM05D003374 ORTHO05D009415 5.6e-52 207.6 124 73.4
Psat2g152000 Pisum sativum HOM05D003374 ORTHO05D009415 5.6e-52 207.6 124 71.0
Thhalv10023081m.g Eutrema salsugineum HOM05D003374 ORTHO05D009415 9.6e-52 206.8 123 74.0
BraA07t28129Z Brassica rapa HOM05D003374 ORTHO05D009415 1.2e-51 206.5 125 73.6
Actinidia22936 Actinidia chinensis HOM05D003374 ORTHO05D009415 1.4e-50 203.0 105 84.8
Carub.0003s3181 Capsella rubella HOM05D003374 ORTHO05D009415 1.8e-50 202.6 125 71.2
FvH4_1g11071 Fragaria vesca HOM05D003374 ORTHO05D009415 6.9e-50 200.7 126 70.6
HPP92_015019 Vanilla planifolia HOM05D003374 ORTHO05D009415 1.5e-49 199.5 124 71.8
HPP92_028513 Vanilla planifolia HOM05D003374 ORTHO05D009415 1.5e-49 199.5 124 71.8
ATR0661G346 Amborella trichopoda HOM05D003374 ORTHO05D009415 2.6e-49 198.7 120 74.2
Nitab4.5_0002105g0060 Nicotiana tabacum HOM05D003374 ORTHO05D009415 1.7e-48 196.1 105 79.0
RcHm_v2.0_Chr2g0098341 Rosa chinensis HOM05D003374 ORTHO05D009415 1.7e-48 196.1 124 71.0
MBI05_g46750_MAGBIO Magnolia biondii HOM05D003374 ORTHO05D009415 4.9e-48 194.5 108 77.8
Nitab4.5_0006892g0030 Nicotiana tabacum HOM05D003374 ORTHO05D009415 1.4e-47 193.0 105 79.0
unitig_26.g9807 Utricularia gibba HOM05D003374 ORTHO05D009415 2.4e-47 192.2 120 73.3
MD15G1237300 Malus domestica HOM05D003374 ORTHO05D009415 4.2e-47 191.4 144 61.8
HanXRQChr14g0442031 Helianthus annuus HOM05D003374 ORTHO05D009415 1.2e-46 189.9 118 71.2
BolC7t40958H Brassica oleracea HOM05D003374 ORTHO05D009415 2.1e-46 189.1 110 73.6
Aa31LG8G14980 Aethionema arabicum HOM05D003374 ORTHO05D009415 1.0e-45 186.8 108 73.1
MSTRG.25049 Avicennia marina HOM05D003374 ORTHO05D009415 1.3e-45 186.4 111 72.1
SEGI_17874 Sequoiadendron giganteum HOM05D003374 ORTHO05D009415 5.1e-45 184.5 121 68.6
MELO3C013742.2 Cucumis melo HOM05D003374 ORTHO05D009415 8.7e-45 183.7 99 77.8
Os03g0136500 Oryza sativa ssp. japonica HOM05D003374 ORTHO05D009415 2.4e-42 175.6 123 61.0
A07p03300 Brassica napus HOM05D003374 ORTHO05D009415 2.0e-41 172.6 103 71.8
Zm00001eb002870 Zea mays HOM05D003374 ORTHO05D009415 2.0e-41 172.6 119 63.9
Sed0013270 Sechium edule HOM05D003374 ORTHO05D009415 4.9e-40 167.9 99 73.7
AagrBONN_evm.TU.Sc2ySwM_362.2709 Anthoceros agrestis HOM05D003374 ORTHO05D009415 1.2e-38 163.3 116 62.1
SMO013G0010 Selaginella moellendorffii HOM05D003374 ORTHO05D009415 1.3e-37 159.8 119 58.0
AagrBONN_evm.TU.Sc2ySwM_362.2707 Anthoceros agrestis HOM05D003374 ORTHO05D009415 1.3e-35 153.3 116 59.5
Sc16g0001870 Simmondsia chinensis HOM05D003374 ORTHO05D009415 4.8e-35 151.4 90 73.3
Pp3c17_11570 Physcomitrium patens HOM05D003374 ORTHO05D009415 2.4e-31 139.0 120 50.8
Glyma.01G162300 Glycine max HOM05D003374 ORTHO05D009415 2.3e-29 132.5 76 72.4
Pp3c2_13370 Physcomitrium patens HOM05D003374 ORTHO05D009415 3.0e-29 132.1 120 50.8
Mapoly0037s0042 Marchantia polymorpha HOM05D003374 ORTHO05D009415 1.1e-28 130.2 116 50.0
Pp3c1_28090 Physcomitrium patens HOM05D003374 ORTHO05D009415 1.5e-28 129.8 120 50.8
CBR_g80133 Chara braunii HOM05D003374 ORTHO05D009415 8.4e-24 114.0 108 48.1
Actinidia17404 Actinidia chinensis HOM05D003374 ORTHO05D009415 4.8e-19 98.2 101 48.5
SGA_v2.0_scaffold52G18966 Striga asiatica HOM05D003340 ORTHO05D003775 1.9e-12 76.3 124 35.5
Sopen04g027620 Solanum pennellii HOM05D003340 ORTHO05D003775 3.1e-10 68.9 87 39.1
Nn1g08798 Nelumbo nucifera HOM05D003340 ORTHO05D003775 4.1e-10 68.6 88 36.4
HPP92_013888 Vanilla planifolia HOM05D003340 ORTHO05D003775 4.1e-10 68.6 87 40.2
HPP92_018105 Vanilla planifolia HOM05D003340 ORTHO05D003775 4.1e-10 68.6 88 36.4
Nn5g28288 Nelumbo nucifera HOM05D003340 ORTHO05D003775 5.3e-10 68.2 87 36.8
Sabra05G0057400 Salix brachista HOM05D003340 ORTHO05D003775 6.9e-10 67.8 85 36.5
AUR62006909 Chenopodium quinoa HOM05D003340 ORTHO05D003775 9.1e-10 67.4 83 36.1
AUR62014338 Chenopodium quinoa HOM05D003340 ORTHO05D003775 9.1e-10 67.4 87 39.1
AUR62019080 Chenopodium quinoa HOM05D003340 ORTHO05D003775 9.1e-10 67.4 87 39.1
Hund21783 Selenicereus undatus HOM05D003340 ORTHO05D003775 9.1e-10 67.4 86 36.0
Solyc04g071630.3 Solanum lycopersicum HOM05D003340 ORTHO05D003775 1.2e-09 67.0 87 37.9
Nitab4.5_0001187g0040 Nicotiana tabacum HOM05D003340 ORTHO05D003775 1.5e-09 66.6 87 37.9
Nitab4.5_0001344g0050 Nicotiana tabacum HOM05D003340 ORTHO05D003775 1.5e-09 66.6 87 37.9
Eucgr.F04352 Eucalyptus grandis HOM05D003340 ORTHO05D003775 2.0e-09 66.2 123 33.3
Aqoxy6G00217 Aquilegia oxysepala HOM05D003340 ORTHO05D003775 2.6e-09 65.9 87 37.9
Potri.005G070600 Populus trichocarpa HOM05D003340 ORTHO05D003775 2.6e-09 65.9 87 34.5
PGR102G2107 Punica granatum HOM05D003340 ORTHO05D003775 3.4e-09 65.5 83 39.8
TWI74G0103 Tripterygium wilfordii HOM05D003340 ORTHO05D003775 3.4e-09 65.5 107 32.7
CAN.G264.5 Capsicum annuum HOM05D003340 ORTHO05D003775 4.5e-09 65.1 85 37.6
Lj4P627T24 Lonicera japonica HOM05D003340 ORTHO05D003775 4.5e-09 65.1 93 36.6
Hund26810 Selenicereus undatus HOM05D003340 ORTHO05D003775 4.5e-09 65.1 87 36.8
Rhsim06G0103500 Rhododendron simsii HOM05D003340 ORTHO05D003775 5.9e-09 64.7 89 38.2
Zm00001eb289950 Zea mays HOM05D003340 ORTHO05D003775 5.9e-09 64.7 90 36.7
EL10Ac1g01010 Beta vulgaris HOM05D003340 ORTHO05D003775 7.7e-09 64.3 87 36.8
Oeu059436.2 Olea europaea HOM05D003340 ORTHO05D003775 7.7e-09 64.3 87 39.1
TWI32G0782 Tripterygium wilfordii HOM05D003340 ORTHO05D003775 7.7e-09 64.3 87 39.1
Duzib093G0952 Durio zibethinus HOM05D003340 ORTHO05D003775 1.3e-08 63.5 126 32.5
Lsat_1_v5_gn_1_10021 Lactuca sativa HOM05D003340 ORTHO05D003775 1.3e-08 63.5 87 35.6
PGSC0003DMG400006659 Solanum tuberosum HOM05D003340 ORTHO05D003775 1.3e-08 63.5 85 36.5
Dinv07220 Davidia involucrata HOM05D003340 ORTHO05D003775 1.7e-08 63.2 86 36.0
FAN15G0091 Fragaria x ananassa HOM05D003340 ORTHO05D003775 1.7e-08 63.2 88 37.5
SMO119G0032 Selaginella moellendorffii HOM05D003340 ORTHO05D003775 1.7e-08 63.2 84 35.7
HPP92_019003 Vanilla planifolia HOM05D003340 ORTHO05D003775 1.7e-08 63.2 90 35.6
Gohir.A06G044800 Gossypium hirsutum HOM05D003340 ORTHO05D003775 2.2e-08 62.8 87 36.8
Ah.06g188530 Amaranthus hybridus HOM05D003340 ORTHO05D003775 2.9e-08 62.4 99 33.3
FAN20G1789 Fragaria x ananassa HOM05D003340 ORTHO05D003775 2.9e-08 62.4 88 37.5
Gohir.A01G189000 Gossypium hirsutum HOM05D003340 ORTHO05D003775 2.9e-08 62.4 122 32.0
Thecc.08G125400 Theobroma cacao HOM05D003340 ORTHO05D003775 2.9e-08 62.4 87 37.9
EL10Ac4g09660 Beta vulgaris HOM05D003340 ORTHO05D003775 3.8e-08 62.0 81 34.6
CSS0046765 Camellia sinensis var. sinensis HOM05D003340 ORTHO05D003775 3.8e-08 62.0 121 31.4
Gohir.A05G268800 Gossypium hirsutum HOM05D003340 ORTHO05D003775 3.8e-08 62.0 87 37.9
Cc10_g11880 Coffea canephora HOM05D003340 ORTHO05D003775 5.0e-08 61.6 98 32.7
Gohir.D06G045300 Gossypium hirsutum HOM05D003340 ORTHO05D003775 5.0e-08 61.6 87 36.8
Gorai.010G050300 Gossypium raimondii HOM05D003340 ORTHO05D003775 5.0e-08 61.6 87 36.8
Manes.02G163400 Manihot esculenta HOM05D003340 ORTHO05D003775 5.0e-08 61.6 87 35.6
Oeu017298.1 Olea europaea HOM05D003340 ORTHO05D003775 6.5e-08 61.2 87 33.3
TAR381G1109 Trochodendron aralioides HOM05D003340 ORTHO05D003775 6.5e-08 61.2 87 34.5
Migut.C01126 Erythranthe guttata HOM05D003340 ORTHO05D003775 8.5e-08 60.8 87 34.5
Gorai.009G283300 Gossypium raimondii HOM05D003340 ORTHO05D003775 8.5e-08 60.8 87 36.8
Manes.18G077306 Manihot esculenta HOM05D003340 ORTHO05D003775 8.5e-08 60.8 87 36.8
SGA_v2.0_scaffold120G33021 Striga asiatica HOM05D003340 ORTHO05D003775 8.5e-08 60.8 91 37.4
Dinv07260 Davidia involucrata HOM05D003340 ORTHO05D003775 1.1e-07 60.5 90 33.3
QL09p034593 Quercus lobata HOM05D003340 ORTHO05D003775 1.1e-07 60.5 87 36.8
Medtr3g088030 Medicago truncatula HOM05D003340 ORTHO05D003775 1.4e-07 60.1 125 31.2
Psat5g087400 Pisum sativum HOM05D003340 ORTHO05D003775 1.4e-07 60.1 123 30.1
Gohir.D01G180500 Gossypium hirsutum HOM05D003340 ORTHO05D003775 1.9e-07 59.7 87 35.6
Gohir.D05G270700 Gossypium hirsutum HOM05D003340 ORTHO05D003775 1.9e-07 59.7 87 35.6
Gorai.002G222100 Gossypium raimondii HOM05D003340 ORTHO05D003775 1.9e-07 59.7 87 35.6
Lalb_Chr10g0101671 Lupinus albus HOM05D003340 ORTHO05D003775 1.9e-07 59.7 120 30.8
MD15G1348300 Malus domestica HOM05D003340 ORTHO05D003775 1.9e-07 59.7 88 36.4
Mapoly0166s0008 Marchantia polymorpha HOM05D003340 ORTHO05D003775 1.9e-07 59.7 89 36.0
Psat6g041160 Pisum sativum HOM05D003340 ORTHO05D003775 1.9e-07 59.7 122 30.3
Duzib041G0745 Durio zibethinus HOM05D003340 ORTHO05D003775 2.5e-07 59.3 128 31.2
TAR636G0511 Trochodendron aralioides HOM05D003340 ORTHO05D003775 2.5e-07 59.3 91 36.3
CSS0003781 Camellia sinensis var. sinensis HOM05D003340 ORTHO05D003775 3.2e-07 58.9 120 30.8
COL.COLO4_36312 Corchorus olitorius HOM05D003340 ORTHO05D003775 3.2e-07 58.9 87 35.6
Os01g0833400 Oryza sativa ssp. japonica HOM05D003340 ORTHO05D003775 3.2e-07 58.9 90 32.2
Ciclev10002808m.g Citrus clementina HOM05D003340 ORTHO05D003775 4.2e-07 58.5 85 37.6
Migut.N00692 Erythranthe guttata HOM05D003340 ORTHO05D003775 4.2e-07 58.5 91 35.2
Cpa.g.sc37.41 Carica papaya HOM05D003340 ORTHO05D003775 5.5e-07 58.2 88 33.0
Glyma.13G079000 Glycine max HOM05D003340 ORTHO05D003775 5.5e-07 58.2 122 30.3
Atru.chr13.1461 Acer truncatum HOM05D003340 ORTHO05D003775 7.2e-07 57.8 87 35.6
MD08G1162700 Malus domestica HOM05D003340 ORTHO05D003775 7.2e-07 57.8 88 35.2
Nn3g19971 Nelumbo nucifera HOM05D003340 ORTHO05D003775 9.4e-07 57.4 62 37.1
GSVIVG01022376001 Vitis vinifera HOM05D003340 ORTHO05D003775 1.2e-06 57.0 84 33.3
Haze_00442 Corylus avellana HOM05D003340 ORTHO05D003775 1.6e-06 56.6 87 34.5
Glyma.14G150300 Glycine max HOM05D003340 ORTHO05D003775 1.6e-06 56.6 86 34.9
VMungo0647G0885 Vigna mungo HOM05D000654 ORTHO05D002330 2.1e-06 56.2 120 30.0
MBI11_g05791_MAGBIO Magnolia biondii HOM05D003340 ORTHO05D003775 2.7e-06 55.8 91 34.1
Potri.005G178000 Populus trichocarpa HOM05D003340 ORTHO05D003775 3.6e-06 55.5 122 33.6
THA.LOC104817332 Tarenaya hassleriana HOM05D003340 ORTHO05D003775 3.6e-06 55.5 87 34.5
GSVIVG01008867001 Vitis vinifera HOM05D003340 ORTHO05D003775 3.6e-06 55.5 85 32.9
PSO170G4666 Papaver somniferum HOM05D003340 ORTHO05D003775 4.7e-06 55.1 90 33.3
Hma1.2p1_0161F.1_g071770 Hydrangea macrophylla HOM05D003340 ORTHO05D003775 7.9e-06 54.3 87 35.6


User provided reference genes

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