Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib147G0460 Durio zibethinus HOM05D002652 ORTHO05D002739 2.3e-75 285.4 136 100.0
Duzib147G0896 Durio zibethinus HOM05D002652 ORTHO05D002739 3.1e-48 195.3 124 77.4
vmacro15483 Vaccinium macrocarpon HOM05D002652 ORTHO05D002739 1.7e-22 109.8 122 44.3
GSVIVG01027930001 Vitis vinifera HOM05D002652 ORTHO05D002739 2.9e-22 109.0 118 44.1
Rhsim02G0044800 Rhododendron simsii HOM05D002652 ORTHO05D002739 1.4e-21 106.7 115 45.2
Prupe.1G049700 Prunus persica HOM05D002652 ORTHO05D002739 1.9e-21 106.3 128 43.8
CANSAT11G2136 Cannabis sativa HOM05D002652 ORTHO05D002739 2.5e-21 105.9 127 41.7
Dinv29797 Davidia involucrata HOM05D002652 ORTHO05D002739 4.2e-21 105.1 133 44.4
Rhsim02G0045100 Rhododendron simsii HOM05D002652 ORTHO05D002739 5.5e-21 104.8 121 43.8
RhsimUnG0101000 Rhododendron simsii HOM05D002652 ORTHO05D002739 7.2e-21 104.4 115 44.3
Rhsim02G0047400 Rhododendron simsii HOM05D002652 ORTHO05D002739 1.6e-20 103.2 121 42.1
Oeu020135.1 Olea europaea HOM05D002652 ORTHO05D002739 2.1e-20 102.8 138 39.9
CSS0002481 Camellia sinensis var. sinensis HOM05D002652 ORTHO05D002739 6.1e-20 101.3 124 42.7
Potri.010G191400 Populus trichocarpa HOM05D002652 ORTHO05D002739 1.0e-19 100.5 122 38.5
Prupe.1G049600 Prunus persica HOM05D002652 ORTHO05D002739 1.4e-19 100.1 115 41.7
Potri.T121000 Populus trichocarpa HOM05D002652 ORTHO05D002739 5.7e-18 94.7 107 38.3
Oeu059391.1 Olea europaea HOM05D002652 ORTHO05D002739 9.7e-18 94.0 120 37.5
Rhsim02G0046000 Rhododendron simsii HOM05D002652 ORTHO05D002739 9.7e-18 94.0 124 37.9
GSVIVG01027929001 Vitis vinifera HOM05D002652 ORTHO05D002739 9.7e-18 94.0 96 41.7
Actinidia39934 Actinidia chinensis HOM05D002652 ORTHO05D002739 1.7e-17 93.2 119 42.9
CSS0031417 Camellia sinensis var. sinensis HOM05D002652 ORTHO05D002739 2.2e-17 92.8 119 41.2
Duzib151G0998 Durio zibethinus HOM05D002652 ORTHO05D002739 2.2e-17 92.8 133 38.3
Potri.T121200 Populus trichocarpa HOM05D002652 ORTHO05D002739 2.2e-17 92.8 109 37.6
Potri.T121301 Populus trichocarpa HOM05D002652 ORTHO05D002739 2.2e-17 92.8 109 37.6
SalBow3G3644 Salvia bowleyana HOM05D002652 ORTHO05D002739 2.8e-17 92.4 117 41.0
DCAR_002582 Daucus carota HOM05D002652 ORTHO05D002739 3.7e-17 92.0 143 37.8
Hma1.2p1_0385F.1_g141620 Hydrangea macrophylla HOM05D002652 ORTHO05D002739 8.2e-17 90.9 114 39.5
SalBow2G0549 Salvia bowleyana HOM05D002652 ORTHO05D002739 1.1e-16 90.5 128 35.9
RcHm_v2.0_Chr5g0024661 Rosa chinensis HOM05D002652 ORTHO05D002739 2.4e-16 89.4 128 37.5
CANSAT78G1278 Cannabis sativa HOM05D002652 ORTHO05D002739 3.1e-16 89.0 124 41.1
FAN12G4037 Fragaria x ananassa HOM05D002652 ORTHO05D002739 3.1e-16 89.0 91 46.2
SalBow2G2144 Salvia bowleyana HOM05D000062 ORTHO05D000043 3.1e-16 89.0 102 42.2
RcHm_v2.0_Chr4g0395571 Rosa chinensis HOM05D002652 ORTHO05D002739 4.1e-16 88.6 107 43.0
Aa31LG7G1790 Aethionema arabicum HOM05D002652 ORTHO05D002739 5.3e-16 88.2 116 38.8
Aa31LG9G4240 Aethionema arabicum HOM05D002652 ORTHO05D002739 6.9e-16 87.8 90 45.6
Rhsim02G0047200 Rhododendron simsii HOM05D002652 ORTHO05D002739 6.9e-16 87.8 115 38.3
DCAR_030381 Daucus carota HOM05D002652 ORTHO05D002739 1.5e-15 86.7 115 39.1
Rhsim02G0046100 Rhododendron simsii HOM05D002652 ORTHO05D002739 1.5e-15 86.7 120 36.7
ECA247G3161 Erigeron canadensis HOM05D002652 ORTHO05D002739 2.0e-15 86.3 122 40.2
RhsimUnG0195300 Rhododendron simsii HOM05D002652 ORTHO05D002739 2.6e-15 85.9 120 40.0
CARHR219080 Cardamine hirsuta HOM05D002652 ORTHO05D002739 3.4e-15 85.5 123 34.1
COL.COLO4_15898 Corchorus olitorius HOM05D002652 ORTHO05D002739 3.4e-15 85.5 120 35.0
Ciclev10005927m.g Citrus clementina HOM05D002652 ORTHO05D002739 7.7e-15 84.3 97 43.3
Aa31LG9G4210 Aethionema arabicum HOM05D002652 ORTHO05D002739 1.0e-14 84.0 92 44.6
Thecc.04G266900 Theobroma cacao HOM05D002652 ORTHO05D002739 1.0e-14 84.0 123 39.8
Haze_25448 Corylus avellana HOM05D002652 ORTHO05D002739 1.3e-14 83.6 115 37.4
QL06p021327 Quercus lobata HOM05D002652 ORTHO05D002739 1.3e-14 83.6 105 35.2
Hma1.2p1_0042F.1_g025730 Hydrangea macrophylla HOM05D002652 ORTHO05D002739 1.7e-14 83.2 120 36.7
QL08p018841 Quercus lobata HOM05D002652 ORTHO05D002739 2.2e-14 82.8 121 32.2
Aa31LG7G1800 Aethionema arabicum HOM05D002652 ORTHO05D002739 2.9e-14 82.4 91 44.0
Aqoxy7G00431 Aquilegia oxysepala HOM05D002652 ORTHO05D002739 2.9e-14 82.4 111 35.1
Lsat_1_v5_gn_2_104120 Lactuca sativa HOM05D002652 ORTHO05D002739 2.9e-14 82.4 128 32.8
A09p20860 Brassica napus HOM05D002652 ORTHO05D002739 3.8e-14 82.0 99 42.4
BraA09t37688Z Brassica rapa HOM05D002652 ORTHO05D002739 3.8e-14 82.0 99 42.4
Ciclev10006564m.g Citrus clementina HOM05D002652 ORTHO05D002739 6.5e-14 81.3 130 36.2
HanXRQChr07g0194071 Helianthus annuus HOM05D002652 ORTHO05D002739 6.5e-14 81.3 120 40.8
Carub.0007s2911 Capsella rubella HOM05D002652 ORTHO05D002739 1.1e-13 80.5 120 34.2
Migut.N00313 Erythranthe guttata HOM05D002652 ORTHO05D002739 1.1e-13 80.5 116 32.8
Hma1.2p1_0565F.1_g179480 Hydrangea macrophylla HOM05D002652 ORTHO05D002739 1.1e-13 80.5 119 34.5
MSTRG.4179 Avicennia marina HOM05D002652 ORTHO05D002739 1.4e-13 80.1 128 33.6
Cfa021216 Carpinus fangiana HOM05D002652 ORTHO05D002739 1.4e-13 80.1 117 35.0
FAN25G0267 Fragaria x ananassa HOM05D002652 ORTHO05D002739 1.4e-13 80.1 86 45.3
Haze_11472 Corylus avellana HOM05D002652 ORTHO05D002739 1.9e-13 79.7 120 35.8
SalBow2G1631 Salvia bowleyana HOM05D002652 ORTHO05D002739 1.9e-13 79.7 133 36.1
BcaB07g30971 Brassica carinata HOM05D002652 ORTHO05D002739 2.5e-13 79.3 92 42.4
BcaC04g21865 Brassica carinata HOM05D002652 ORTHO05D002739 2.5e-13 79.3 93 44.1
BolC9t55542H Brassica oleracea HOM05D002652 ORTHO05D002739 2.5e-13 79.3 93 44.1
Ciclev10007025m.g Citrus clementina HOM05D002652 ORTHO05D002739 2.5e-13 79.3 102 40.2
THA.LOC104821630 Tarenaya hassleriana HOM05D002652 ORTHO05D002739 3.2e-13 79.0 110 37.3
Aa31LG9G4200 Aethionema arabicum HOM05D002652 ORTHO05D002739 5.5e-13 78.2 103 40.8
QL06p021274 Quercus lobata HOM05D002652 ORTHO05D002739 5.5e-13 78.2 120 35.8
FvH4_4g04980 Fragaria vesca HOM05D002652 ORTHO05D002739 1.2e-12 77.0 125 36.8
FAN12G0867 Fragaria x ananassa HOM05D004511 ORTHO05D005348 1.2e-12 77.0 125 36.8
TAR365G0384 Trochodendron aralioides HOM05D002652 ORTHO05D002739 1.2e-12 77.0 129 32.6
Aa31LG9G4290 Aethionema arabicum HOM05D002652 ORTHO05D002739 1.6e-12 76.6 90 42.2
Duzib151G0943 Durio zibethinus HOM05D002652 ORTHO05D002739 1.6e-12 76.6 126 37.3
Oeu011205.1 Olea europaea HOM05D002652 ORTHO05D002739 1.6e-12 76.6 129 28.7
FAN17G3082 Fragaria x ananassa HOM05D002652 ORTHO05D002739 2.1e-12 76.3 98 38.8
FvH4_4g04740 Fragaria vesca HOM05D002652 ORTHO05D002739 2.7e-12 75.9 124 31.5
RhsimUnG0195100 Rhododendron simsii HOM05D002652 ORTHO05D002739 2.7e-12 75.9 107 43.0
TAR174G0001 Trochodendron aralioides HOM05D002652 ORTHO05D002739 2.7e-12 75.9 129 31.8
C09p26400 Brassica napus HOM05D002652 ORTHO05D002739 4.7e-12 75.1 93 43.0
Duzib151G0030 Durio zibethinus HOM05D002652 ORTHO05D002739 1.8e-11 73.2 125 34.4
FAN10G2095 Fragaria x ananassa HOM05D002652 ORTHO05D002739 1.8e-11 73.2 122 31.1
Atru.chr4.1903 Acer truncatum HOM05D002652 ORTHO05D002739 2.3e-11 72.8 128 30.5
Cfa014794 Carpinus fangiana HOM05D002652 ORTHO05D002739 2.3e-11 72.8 114 30.7
CiPaw.02G106000 Carya illinoinensis HOM05D002652 ORTHO05D002739 2.3e-11 72.8 125 34.4
Ciclev10007030m.g Citrus clementina HOM05D002652 ORTHO05D002739 2.3e-11 72.8 83 42.2
FAN10G1323 Fragaria x ananassa HOM05D002652 ORTHO05D002739 2.3e-11 72.8 122 31.1
Potri.019G026820 Populus trichocarpa HOM05D002652 ORTHO05D002739 2.3e-11 72.8 123 31.7
Potri.019G026860 Populus trichocarpa HOM05D002652 ORTHO05D002739 2.3e-11 72.8 130 31.5
AL9U10120 Arabidopsis lyrata HOM05D002652 ORTHO05D002739 3.0e-11 72.4 120 33.3
Sabra19G0035100 Salix brachista HOM05D002652 ORTHO05D002739 3.0e-11 72.4 122 31.1
Sabra19G0035500 Salix brachista HOM05D002652 ORTHO05D002739 3.0e-11 72.4 122 31.1
AT4G13440 Arabidopsis thaliana HOM05D002652 ORTHO05D002739 3.9e-11 72.0 120 33.3
COL.COLO4_15902 Corchorus olitorius HOM05D002652 ORTHO05D002739 3.9e-11 72.0 120 38.3
FAN12G2993 Fragaria x ananassa HOM05D002652 ORTHO05D002739 3.9e-11 72.0 124 30.6
TAR636G3443 Trochodendron aralioides HOM05D002652 ORTHO05D002739 3.9e-11 72.0 130 30.8
COL.COLO4_15987 Corchorus olitorius HOM05D002652 ORTHO05D002739 6.7e-11 71.2 116 37.9
ECA238G3361 Erigeron canadensis HOM05D000095 ORTHO05D002739 6.7e-11 71.2 127 33.1
FvH4_4g04860 Fragaria vesca HOM05D002652 ORTHO05D002739 6.7e-11 71.2 91 38.5
FvH4_4g04990 Fragaria vesca HOM05D002652 ORTHO05D002739 6.7e-11 71.2 130 30.8
Sabra19G0038100 Salix brachista HOM05D002652 ORTHO05D002739 6.7e-11 71.2 122 30.3
Aa31LG9G4330 Aethionema arabicum HOM05D002652 ORTHO05D002739 8.8e-11 70.9 102 33.3
Migut.G00567 Erythranthe guttata HOM05D002652 ORTHO05D002739 8.8e-11 70.9 129 34.9
Prupe.1G049800 Prunus persica HOM05D002652 ORTHO05D002739 8.8e-11 70.9 106 39.6
Prupe.4G134500 Prunus persica HOM05D002652 ORTHO05D002739 8.8e-11 70.9 135 32.6
Oeu061866.1 Olea europaea HOM05D002652 ORTHO05D002739 1.1e-10 70.5 123 34.1
Potri.019G027440 Populus trichocarpa HOM05D002652 ORTHO05D002739 1.1e-10 70.5 130 28.5
COL.COLO4_15909 Corchorus olitorius HOM05D002652 ORTHO05D002739 1.5e-10 70.1 118 36.4
Potri.019G026900 Populus trichocarpa HOM05D002652 ORTHO05D002739 2.0e-10 69.7 124 32.3
Potri.019G027100 Populus trichocarpa HOM05D002652 ORTHO05D002739 2.0e-10 69.7 124 32.3
Lsat_1_v5_gn_2_105441 Lactuca sativa HOM05D002652 ORTHO05D002739 2.6e-10 69.3 128 32.0
Rhsim02G0045000 Rhododendron simsii HOM05D002652 ORTHO05D002739 2.6e-10 69.3 79 44.3
Rhsim02G0046900 Rhododendron simsii HOM05D002652 ORTHO05D002739 3.3e-10 68.9 115 29.6
RcHm_v2.0_Chr4g0395751 Rosa chinensis HOM05D002652 ORTHO05D002739 3.3e-10 68.9 123 31.7
Potri.019G028800 Populus trichocarpa HOM05D002652 ORTHO05D002739 4.4e-10 68.6 123 30.9
Sabra19G0038500 Salix brachista HOM05D002652 ORTHO05D002739 4.4e-10 68.6 128 28.9
Sabra19G0038700 Salix brachista HOM05D002652 ORTHO05D002739 4.4e-10 68.6 128 28.9
COL.COLO4_15901 Corchorus olitorius HOM05D002652 ORTHO05D002739 7.4e-10 67.8 118 36.4
Sabra19G0038300 Salix brachista HOM05D002652 ORTHO05D002739 7.4e-10 67.8 128 28.1
CiPaw.08G106600 Carya illinoinensis HOM05D002652 ORTHO05D002739 1.3e-09 67.0 84 41.7
Potri.019G027200 Populus trichocarpa HOM05D002652 ORTHO05D002739 1.7e-09 66.6 131 29.0
RcHm_v2.0_Chr4g0395801 Rosa chinensis HOM05D002652 ORTHO05D002739 1.7e-09 66.6 82 45.1
Sabra19G0038800 Salix brachista HOM05D002652 ORTHO05D002739 1.7e-09 66.6 128 27.3
Aa31LG7G1660 Aethionema arabicum HOM05D002652 ORTHO05D002739 3.7e-09 65.5 124 32.3
CiPaw.08G106400 Carya illinoinensis HOM05D002652 ORTHO05D002739 3.7e-09 65.5 84 42.9
CiPaw.08G106800 Carya illinoinensis HOM05D002652 ORTHO05D002739 3.7e-09 65.5 93 36.6
Potri.019G026780 Populus trichocarpa HOM05D002652 ORTHO05D002739 3.7e-09 65.5 124 28.2
Cpa.g.sc59.9 Carica papaya HOM05D002652 ORTHO05D002739 6.3e-09 64.7 129 29.5
Cpa.g.sc8968.1 Carica papaya HOM05D002652 ORTHO05D002739 6.3e-09 64.7 129 29.5
CiPaw.01G177100 Carya illinoinensis HOM05D002652 ORTHO05D002739 6.3e-09 64.7 72 40.3
QL09p048788 Quercus lobata HOM05D002652 ORTHO05D002739 8.2e-09 64.3 109 36.7
Rhsim02G0044400 Rhododendron simsii HOM05D002652 ORTHO05D002739 8.2e-09 64.3 126 26.2
Rhsim02G0046500 Rhododendron simsii HOM05D002652 ORTHO05D002739 8.2e-09 64.3 126 26.2
RcHm_v2.0_Chr4g0397571 Rosa chinensis HOM05D002652 ORTHO05D002739 8.2e-09 64.3 90 36.7
vmacro15484 Vaccinium macrocarpon HOM05D002652 ORTHO05D002739 8.2e-09 64.3 115 27.8
COL.COLO4_15907 Corchorus olitorius HOM05D002652 ORTHO05D002739 1.1e-08 63.9 118 36.4
Nn1g00658 Nelumbo nucifera HOM05D002652 ORTHO05D002739 1.1e-08 63.9 133 30.1
Migut.N00315 Erythranthe guttata HOM05D002652 ORTHO05D002739 1.8e-08 63.2 77 36.4
Oeu011211.1 Olea europaea HOM05D002652 ORTHO05D002739 4.1e-08 62.0 80 38.8
RcHm_v2.0_Chr4g0395461 Rosa chinensis HOM05D002652 ORTHO05D002739 4.1e-08 62.0 83 37.3
Actinidia39935 Actinidia chinensis HOM05D002652 ORTHO05D002739 5.3e-08 61.6 118 31.4
FAN17G1721 Fragaria x ananassa HOM05D002652 ORTHO05D002739 5.3e-08 61.6 83 39.8
Manes.15G046400 Manihot esculenta HOM05D002652 ORTHO05D002739 5.3e-08 61.6 117 29.9
Oeu011207.1 Olea europaea HOM05D002652 ORTHO05D002739 5.3e-08 61.6 127 26.0
CiPaw.02G106100 Carya illinoinensis HOM05D002652 ORTHO05D002739 7.0e-08 61.2 121 28.9
Manes.03G158000 Manihot esculenta HOM05D002652 ORTHO05D002739 7.0e-08 61.2 114 28.1
RcHm_v2.0_Chr4g0395551 Rosa chinensis HOM05D002652 ORTHO05D002739 7.0e-08 61.2 87 35.6
Nn2g14922 Nelumbo nucifera HOM05D002652 ORTHO05D002739 9.1e-08 60.8 74 43.2
Prupe.1G050000 Prunus persica HOM05D002652 ORTHO05D002739 9.1e-08 60.8 129 28.7
FAN22G0933 Fragaria x ananassa HOM05D004511 ORTHO05D005348 2.0e-07 59.7 82 40.2
Rhsim02G0045200 Rhododendron simsii HOM05D002652 ORTHO05D002739 2.0e-07 59.7 110 29.1
FvH4_4g04900 Fragaria vesca HOM05D002652 ORTHO05D002739 2.6e-07 59.3 85 34.1
DCAR_002581 Daucus carota HOM05D002652 ORTHO05D002739 3.4e-07 58.9 65 43.1
Eucgr.K00744 Eucalyptus grandis HOM05D002652 ORTHO05D002739 4.5e-07 58.5 72 43.1
FvH4_4g04850 Fragaria vesca HOM05D002652 ORTHO05D002739 5.9e-07 58.2 80 38.8
FAN12G2048 Fragaria x ananassa HOM05D002652 ORTHO05D002739 5.9e-07 58.2 80 38.8
Migut.N00887 Erythranthe guttata HOM05D002652 ORTHO05D002739 1.0e-06 57.4 107 29.0
Prupe.1G050100 Prunus persica HOM05D002652 ORTHO05D002739 1.3e-06 57.0 123 30.1
Rhsim02G0044600 Rhododendron simsii HOM05D002652 ORTHO05D002739 1.7e-06 56.6 96 34.4
MD05G1228500 Malus domestica HOM05D002652 ORTHO05D002739 5.0e-06 55.1 95 32.6
FvH4_3g15020 Fragaria vesca HOM05D002652 ORTHO05D002739 8.5e-06 54.3 99 32.3


User provided reference genes

Program Settings