Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib147G0404 Durio zibethinus HOM05D005746 ORTHO05D007105 0.0e+00 1859.7 937 100.0
Duzib147G0034 Durio zibethinus HOM05D005746 ORTHO05D007105 0.0e+00 1803.9 935 97.4
Gorai.006G018000 Gossypium raimondii HOM05D005746 ORTHO05D007105 0.0e+00 1646.7 936 88.9
Gohir.A09G017100 Gossypium hirsutum HOM05D005746 ORTHO05D007105 0.0e+00 1640.6 936 88.7
COL.COLO4_33291 Corchorus olitorius HOM05D005746 ORTHO05D007105 0.0e+00 1553.5 936 84.5
Atru.chr8.140 Acer truncatum HOM05D005746 ORTHO05D007105 0.0e+00 1308.5 943 70.8
Cpa.g.sc14.10 Carica papaya HOM05D005746 ORTHO05D007105 0.0e+00 1273.5 941 70.0
Dinv33748 Davidia involucrata HOM05D005746 ORTHO05D007105 0.0e+00 1254.2 943 68.0
CiPaw.03G027900 Carya illinoinensis HOM05D005746 ORTHO05D007105 0.0e+00 1251.9 936 68.8
CSS0009890 Camellia sinensis var. sinensis HOM05D005746 ORTHO05D007105 0.0e+00 1240.3 943 67.1
CSS0043134 Camellia sinensis var. sinensis HOM05D005746 ORTHO05D007105 0.0e+00 1240.3 943 67.1
Haze_14549 Corylus avellana HOM05D005746 ORTHO05D007105 0.0e+00 1236.9 935 68.2
TWI34G0228 Tripterygium wilfordii HOM05D005746 ORTHO05D007105 0.0e+00 1229.5 936 68.6
Cfa007537 Carpinus fangiana HOM05D005746 ORTHO05D007105 0.0e+00 1228.4 935 67.8
Potri.004G128601 Populus trichocarpa HOM05D005746 ORTHO05D007105 0.0e+00 1228.0 943 68.0
QL02p081653 Quercus lobata HOM05D005746 ORTHO05D007105 0.0e+00 1213.0 940 66.0
Sabra04G0090500 Salix brachista HOM05D005746 ORTHO05D007105 0.0e+00 1202.2 943 66.9
FvH4_6g48870 Fragaria vesca HOM05D005746 ORTHO05D007105 0.0e+00 1198.7 937 65.8
MD09G1049900 Malus domestica HOM05D005746 ORTHO05D007105 0.0e+00 1195.6 948 65.3
MD17G1050300 Malus domestica HOM05D005746 ORTHO05D007105 0.0e+00 1195.6 943 65.6
RcHm_v2.0_Chr2g0168711 Rosa chinensis HOM05D005746 ORTHO05D007105 0.0e+00 1195.6 935 65.8
MELO3C009878.2 Cucumis melo HOM05D005746 ORTHO05D007105 0.0e+00 1192.6 936 65.8
Eucgr.J01361 Eucalyptus grandis HOM05D005746 ORTHO05D007105 0.0e+00 1191.8 935 66.5
ClCG10G014980 Citrullus lanatus HOM05D005746 ORTHO05D007105 0.0e+00 1191.0 936 66.7
Rhsim10G0040100 Rhododendron simsii HOM05D005746 ORTHO05D007105 0.0e+00 1187.6 961 64.1
THA.LOC104823176 Tarenaya hassleriana HOM05D005746 ORTHO05D007105 0.0e+00 1187.6 940 65.2
TAR374G0083 Trochodendron aralioides HOM05D005746 ORTHO05D007105 0.0e+00 1184.9 943 65.3
FAN02G0556 Fragaria x ananassa HOM05D005746 ORTHO05D007105 0.0e+00 1180.6 936 64.9
Actinidia06086 Actinidia chinensis HOM05D005746 ORTHO05D007105 0.0e+00 1179.1 943 65.1
vmacro05704 Vaccinium macrocarpon HOM05D005746 ORTHO05D007105 0.0e+00 1179.1 942 64.2
CsaV3_3G041540 Cucumis sativus L. HOM05D005746 ORTHO05D007105 0.0e+00 1177.9 939 65.1
vmacro17103 Vaccinium macrocarpon HOM05D005746 ORTHO05D007105 0.0e+00 1177.5 942 64.2
Sed0005323 Sechium edule HOM05D005746 ORTHO05D007105 0.0e+00 1176.8 935 65.7
Hund15611 Selenicereus undatus HOM05D005746 ORTHO05D007105 0.0e+00 1167.1 942 63.9
Nn4g23132 Nelumbo nucifera HOM05D005746 ORTHO05D007105 0.0e+00 1161.7 943 63.3
MBI05_g35450_MAGBIO Magnolia biondii HOM05D005746 ORTHO05D007105 0.0e+00 1146.7 943 62.9
Lj2g0006836 Lotus japonicus HOM05D005746 ORTHO05D007105 0.0e+00 1145.6 952 63.3
Cc07_g03290 Coffea canephora HOM05D005746 ORTHO05D007105 0.0e+00 1137.5 938 63.0
PGR083G2853 Punica granatum HOM05D005746 ORTHO05D007105 0.0e+00 1136.3 940 62.8
DCAR_021658 Daucus carota HOM05D005746 ORTHO05D007105 0.0e+00 1132.5 941 62.7
arahy.Tifrunner.gnm1.ann1.IK9RDG Arachis hypogaea HOM05D005746 ORTHO05D007105 0.0e+00 1127.5 948 63.0
vmacro05746 Vaccinium macrocarpon HOM05D005746 ORTHO05D007105 0.0e+00 1127.5 942 62.3
arahy.Tifrunner.gnm1.ann1.C4FZ3V Arachis hypogaea HOM05D005746 ORTHO05D007105 0.0e+00 1126.3 949 62.9
Ca_04277_v3 Cicer arietinum L. HOM05D005746 ORTHO05D007105 0.0e+00 1125.9 953 63.2
Aa31LG2G4330 Aethionema arabicum HOM05D005746 ORTHO05D007105 0.0e+00 1124.8 940 62.2
Psat1g074560 Pisum sativum HOM05D005746 ORTHO05D007105 0.0e+00 1124.8 950 63.6
C07p37790 Brassica napus HOM05D005746 ORTHO05D007105 0.0e+00 1120.5 941 63.2
BolC7t44300H Brassica oleracea HOM05D005746 ORTHO05D007105 0.0e+00 1120.5 941 63.2
EL10Ac2g02971 Beta vulgaris HOM05D005746 ORTHO05D007105 0.0e+00 1114.8 944 61.9
A06p40280 Brassica napus HOM05D005746 ORTHO05D007105 0.0e+00 1112.1 937 62.9
BraA06t26946Z Brassica rapa HOM05D005746 ORTHO05D007105 0.0e+00 1112.1 937 62.9
Aqoxy3G00678 Aquilegia oxysepala HOM05D005746 ORTHO05D007105 0.0e+00 1108.2 943 60.0
Lalb_Chr06g0175391 Lupinus albus HOM05D005746 ORTHO05D007105 0.0e+00 1106.7 954 61.4
Sp2g17500 Schrenkiella parvula HOM05D005746 ORTHO05D007105 0.0e+00 1106.3 940 62.7
MSTRG.3234 Avicennia marina HOM05D005746 ORTHO05D007105 0.0e+00 1103.6 947 61.4
Thhalv10003503m.g Eutrema salsugineum HOM05D005746 ORTHO05D007105 0.0e+00 1103.6 939 62.2
Solyc03g062650.3 Solanum lycopersicum HOM05D005746 ORTHO05D007105 0.0e+00 1101.7 937 61.9
Nitab4.5_0002923g0020 Nicotiana tabacum HOM05D005746 ORTHO05D007105 0.0e+00 1100.9 936 61.4
Sopen03g014980 Solanum pennellii HOM05D005746 ORTHO05D007105 0.0e+00 1100.9 935 62.1
Sc14g0005950 Simmondsia chinensis HOM05D005746 ORTHO05D007105 0.0e+00 1098.6 947 62.3
Oeu060938.1 Olea europaea HOM05D005746 ORTHO05D007105 0.0e+00 1097.8 943 61.0
TPR.G10375 Trifolium pratense HOM05D005746 ORTHO05D007105 0.0e+00 1097.4 951 61.8
SGA_v2.0_scaffold1G00328 Striga asiatica HOM05D005746 ORTHO05D007105 0.0e+00 1094.7 947 61.0
AUR62039819 Chenopodium quinoa HOM05D005746 ORTHO05D007105 0.0e+00 1093.6 943 61.3
PSO017G1620 Papaver somniferum HOM05D005746 ORTHO05D007105 0.0e+00 1091.6 945 59.6
CAN.G1205.1 Capsicum annuum HOM05D005746 ORTHO05D007105 0.0e+00 1091.3 936 62.1
AUR62034394 Chenopodium quinoa HOM05D005746 ORTHO05D007105 0.0e+00 1090.9 943 61.0
Medtr6g011760 Medicago truncatula HOM05D005746 ORTHO05D007105 0.0e+00 1088.9 946 62.2
BcaC06g33649 Brassica carinata HOM05D005746 ORTHO05D007105 0.0e+00 1087.0 941 62.0
Lsat_1_v5_gn_3_100801 Lactuca sativa HOM05D005746 ORTHO05D007105 0.0e+00 1086.6 948 61.5
VMungo0464G0495 Vigna mungo HOM05D005746 ORTHO05D007105 0.0e+00 1084.3 943 61.7
Carub.0005s2180 Capsella rubella HOM05D005746 ORTHO05D007105 0.0e+00 1082.4 941 61.3
Glyma.19G021700 Glycine max HOM05D005746 ORTHO05D007105 0.0e+00 1077.8 949 61.4
Ciclev10010889m.g Citrus clementina HOM05D005746 ORTHO05D007105 0.0e+00 1075.8 849 67.4
AT3G55160 Arabidopsis thaliana HOM05D005746 ORTHO05D007105 0.0e+00 1075.1 941 61.6
HanXRQChr14g0439111 Helianthus annuus HOM05D005746 ORTHO05D007105 6.4e-312 1073.9 947 59.9
Peaxi162Scf00451g00821 Petunia axillaris HOM05D005746 ORTHO05D007105 1.3e-311 1072.8 948 60.3
AL5G36280 Arabidopsis lyrata HOM05D005746 ORTHO05D007105 4.5e-311 1071.2 941 61.5
Phvul.004G028000 Phaseolus vulgaris HOM05D005746 ORTHO05D007105 2.4e-309 1065.4 945 60.5
CARHR165190 Cardamine hirsuta HOM05D005746 ORTHO05D007105 4.1e-309 1064.7 941 60.9
Migut.H00912 Erythranthe guttata HOM05D005746 ORTHO05D007105 7.7e-308 1060.4 947 59.2
ECA246G0262 Erigeron canadensis HOM05D005746 ORTHO05D007105 9.5e-306 1053.5 943 59.7
VMungo0464G0208 Vigna mungo HOM05D005746 ORTHO05D007105 1.6e-281 973.0 838 62.4
Thecc.04G080100 Theobroma cacao HOM05D005746 ORTHO05D007105 2.5e-274 949.1 535 89.5
Zm00001eb414960 Zea mays HOM05D005746 ORTHO05D007105 6.8e-272 941.0 936 54.2
ATR0564G261 Amborella trichopoda HOM05D005746 ORTHO05D007105 6.4e-270 934.5 995 51.8
HPP92_011243 Vanilla planifolia HOM05D005746 ORTHO05D007105 1.0e-267 927.2 938 55.3
vmacro22549 Vaccinium macrocarpon HOM05D005746 ORTHO05D007105 2.5e-266 922.5 814 60.2
Lju41A18T48 Lonicera japonica HOM05D005746 ORTHO05D007105 4.8e-265 918.3 783 63.3
Gohir.D09G015800 Gossypium hirsutum HOM05D005746 ORTHO05D007105 6.9e-264 914.4 513 88.9
FAN09G1953 Fragaria x ananassa HOM05D005746 ORTHO05D007105 8.4e-246 854.4 584 71.6
Manes.15G175000 Manihot esculenta HOM05D005746 ORTHO05D007105 5.5e-229 798.5 541 73.4
SEGI_38380 Sequoiadendron giganteum HOM05D005746 ORTHO05D007105 3.6e-228 795.8 1013 45.8
Prupe.3G268800 Prunus persica HOM05D005746 ORTHO05D007105 5.5e-221 771.9 535 72.7
CDE09G1403 Ceratophyllum demersum HOM05D005746 ORTHO05D007105 1.7e-214 750.4 725 56.1
vmacro05485 Vaccinium macrocarpon HOM05D005746 ORTHO05D007105 1.0e-206 724.5 774 53.4
Gohir.D09G015833 Gossypium hirsutum HOM05D005746 ORTHO05D007105 2.8e-180 636.7 370 88.1
Mapoly0207s0007 Marchantia polymorpha HOM05D005746 ORTHO05D007105 2.7e-175 620.2 1005 38.9
SMO367G0809 Selaginella moellendorffii HOM05D005746 ORTHO05D007105 3.9e-174 616.3 961 38.3
Pp3c6_28730 Physcomitrium patens HOM05D005746 ORTHO05D007105 3.3e-173 613.2 1059 37.2
GSVIVG01011388001 Vitis vinifera HOM05D005746 ORTHO05D007105 3.7e-124 450.3 940 35.2
Os08g0169700 Oryza sativa ssp. japonica HOM05D005746 ORTHO05D007105 7.4e-117 426.0 399 56.9
CAN.G284.10 Capsicum annuum HOM05D005746 ORTHO05D007105 1.5e-80 305.4 317 53.0
CBR_g50021 Chara braunii HOM05D005746 ORTHO05D007105 3.7e-76 290.8 1024 26.9
CAN.G691.2 Capsicum annuum HOM05D005746 ORTHO05D007105 2.4e-75 288.1 306 50.3
CAN.G65.185 Capsicum annuum HOM05D005746 ORTHO05D007105 3.5e-66 257.7 317 47.0
CAN.G525.35 Capsicum annuum HOM05D005746 ORTHO05D007105 3.6e-63 247.7 233 56.2
MCO11G207 Micromonas commoda HOM05D005746 ORTHO05D007105 1.5e-61 242.3 1059 25.6
unitig_0.g531 Utricularia gibba HOM05D005746 ORTHO05D007105 3.7e-60 237.7 524 33.4
CAN.G697.12 Capsicum annuum HOM05D005746 ORTHO05D007105 6.6e-57 226.9 233 53.2
CAN.G352.19 Capsicum annuum HOM05D005746 ORTHO05D007105 4.6e-50 204.1 274 42.7
CDE09G0909 Ceratophyllum demersum HOM05D005746 ORTHO05D007105 5.2e-46 190.7 135 71.1
Gohir.A11G290200 Gossypium hirsutum HOM05D005746 ORTHO05D007105 1.2e-45 189.5 123 76.4
AagrBONN_evm.TU.Sc2ySwM_369.378 Anthoceros agrestis HOM05D005746 ORTHO05D007105 2.8e-39 168.3 477 28.9
CAN.G385.2 Capsicum annuum HOM05D005746 ORTHO05D007105 2.8e-39 168.3 223 45.7
Lju41C18T12 Lonicera japonica HOM05D005746 ORTHO05D007105 2.9e-36 158.3 111 73.0
CAN.G853.24 Capsicum annuum HOM05D005746 ORTHO05D007105 2.0e-29 135.6 138 52.2
VMungo0331G1774 Vigna mungo HOM05D005746 ORTHO05D007105 1.6e-26 125.9 97 63.9
AagrBONN_evm.TU.Sc2ySwM_369.374 Anthoceros agrestis HOM05D005746 ORTHO05D007105 3.3e-16 91.7 105 44.8


User provided reference genes

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