Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib147G0196 Durio zibethinus HOM05D005273 ORTHO05D006195 2.7e-233 811.6 398 100.0
Duzib264G0403 Durio zibethinus HOM05D005273 ORTHO05D006195 2.4e-202 708.8 398 89.2
Gohir.A11G060000 Gossypium hirsutum HOM05D005273 ORTHO05D006195 5.4e-194 681.0 394 84.8
Gorai.007G069300 Gossypium raimondii HOM05D005273 ORTHO05D006195 1.3e-192 676.4 394 84.0
COL.COLO4_33584 Corchorus olitorius HOM05D005273 ORTHO05D006195 5.6e-191 671.0 378 85.7
FvH4_6g26410 Fragaria vesca HOM05D005273 ORTHO05D006195 6.6e-184 647.5 368 84.5
Gohir.D11G064100 Gossypium hirsutum HOM05D005273 ORTHO05D006195 4.3e-183 644.8 343 90.1
QL08p039365 Quercus lobata HOM05D005273 ORTHO05D006195 2.1e-182 642.5 366 83.9
TWI59G0041 Tripterygium wilfordii HOM05D005273 ORTHO05D006195 8.1e-182 640.6 368 84.2
Prupe.3G131200 Prunus persica HOM05D005273 ORTHO05D006195 1.4e-181 639.8 368 83.2
RcHm_v2.0_Chr2g0127911 Rosa chinensis HOM05D005273 ORTHO05D006195 2.6e-180 635.6 363 83.5
Atru.chr6.2972 Acer truncatum HOM05D005273 ORTHO05D006195 7.6e-180 634.0 363 84.3
Sabra07G0113000 Salix brachista HOM05D005273 ORTHO05D006195 1.7e-179 632.9 371 82.7
FAN05G3218 Fragaria x ananassa HOM05D005273 ORTHO05D006195 2.2e-179 632.5 347 87.3
Manes.02G045100 Manihot esculenta HOM05D005273 ORTHO05D006195 4.9e-179 631.3 342 87.4
Potri.007G139700 Populus trichocarpa HOM05D005273 ORTHO05D006195 6.4e-179 630.9 343 88.3
Ciclev10015816m.g Citrus clementina HOM05D005273 ORTHO05D006195 1.4e-178 629.8 343 88.0
CANSAT64G2205 Cannabis sativa HOM05D005273 ORTHO05D006195 3.2e-178 628.6 365 81.9
MD09G1233100 Malus domestica HOM05D005273 ORTHO05D006195 2.1e-177 625.9 368 81.8
A03p53890 Brassica napus HOM05D005273 ORTHO05D006195 2.7e-177 625.5 373 81.8
BraA03t14458Z Brassica rapa HOM05D005273 ORTHO05D006195 4.6e-177 624.8 362 84.0
Nn1g06518 Nelumbo nucifera HOM05D005273 ORTHO05D006195 4.6e-177 624.8 364 82.7
GSVIVG01020564001 Vitis vinifera HOM05D005273 ORTHO05D006195 7.9e-177 624.0 343 87.5
Eucgr.K01040 Eucalyptus grandis HOM05D005273 ORTHO05D006195 1.8e-176 622.9 363 81.0
Hma1.2p1_0002F.1_g002020 Hydrangea macrophylla HOM05D005273 ORTHO05D006195 3.0e-176 622.1 364 82.7
Sabra07G0117800 Salix brachista HOM05D005273 ORTHO05D006195 8.7e-176 620.5 388 78.9
ClCG10G015250 Citrullus lanatus HOM05D005273 ORTHO05D006195 1.1e-175 620.2 351 84.0
THA.LOC104823543 Tarenaya hassleriana HOM05D005273 ORTHO05D006195 3.3e-175 618.6 386 78.5
BolC7t45723H Brassica oleracea HOM05D005273 ORTHO05D006195 5.6e-175 617.8 380 80.3
CARHR229970 Cardamine hirsuta HOM05D005273 ORTHO05D006195 7.4e-175 617.5 361 81.7
A01p14180 Brassica napus HOM05D005273 ORTHO05D006195 9.6e-175 617.1 389 78.9
Migut.D02068 Erythranthe guttata HOM05D005273 ORTHO05D006195 2.1e-174 615.9 366 80.3
Thhalv10025474m.g Eutrema salsugineum HOM05D005273 ORTHO05D006195 2.1e-174 615.9 347 85.6
Aa31LG2G13370 Aethionema arabicum HOM05D005273 ORTHO05D006195 2.8e-174 615.5 394 76.9
Haze_12807 Corylus avellana HOM05D005273 ORTHO05D006195 2.8e-174 615.5 356 84.0
Nn1g04120 Nelumbo nucifera HOM05D005273 ORTHO05D006195 3.7e-174 615.1 343 85.1
Sp7g21020 Schrenkiella parvula HOM05D005273 ORTHO05D006195 4.8e-174 614.8 347 85.6
Sed0018091 Sechium edule HOM05D005273 ORTHO05D006195 4.8e-174 614.8 353 83.0
BraA01t01367Z Brassica rapa HOM05D005273 ORTHO05D006195 6.2e-174 614.4 362 82.0
C07p52300 Brassica napus HOM05D005273 ORTHO05D006195 1.1e-173 613.6 380 79.7
PGR142G4354 Punica granatum HOM05D005273 ORTHO05D006195 1.1e-173 613.6 343 84.5
CANSAT64G2383 Cannabis sativa HOM05D005273 ORTHO05D006195 1.4e-173 613.2 347 83.3
Glyma.12G114500 Glycine max HOM05D005273 ORTHO05D006195 1.4e-173 613.2 350 82.9
Carub.0007s1834 Capsella rubella HOM05D005273 ORTHO05D006195 4.0e-173 611.7 369 80.8
BcaNung01659 Brassica carinata HOM05D005273 ORTHO05D006195 5.3e-173 611.3 370 81.1
AL7G30590 Arabidopsis lyrata HOM05D005273 ORTHO05D006195 6.9e-173 610.9 358 82.4
CsaV3_3G041260 Cucumis sativus L. HOM05D005273 ORTHO05D006195 1.5e-172 609.8 367 80.1
Carub.0001s3611 Capsella rubella HOM05D005273 ORTHO05D006195 2.0e-172 609.4 369 80.2
VMungo1127G0137 Vigna mungo HOM05D005273 ORTHO05D006195 3.4e-172 608.6 362 80.7
arahy.Tifrunner.gnm1.ann1.EEV1KR Arachis hypogaea HOM05D005273 ORTHO05D006195 1.3e-171 606.7 363 78.5
CSS0011944 Camellia sinensis var. sinensis HOM05D005273 ORTHO05D006195 1.7e-171 606.3 363 80.7
CSS0048709 Camellia sinensis var. sinensis HOM05D005273 ORTHO05D006195 1.7e-171 606.3 363 80.7
MSTRG.21306 Avicennia marina HOM05D005273 ORTHO05D006195 2.9e-171 605.5 369 78.6
Ca_18943_v3 Cicer arietinum L. HOM05D005273 ORTHO05D006195 6.4e-171 604.4 342 83.0
arahy.Tifrunner.gnm1.ann1.RDE8QD Arachis hypogaea HOM05D005273 ORTHO05D006195 8.4e-171 604.0 362 78.2
arahy.Tifrunner.gnm1.ann1.891C6J Arachis hypogaea HOM05D005273 ORTHO05D006195 1.4e-170 603.2 362 78.7
Solyc02g072105.1 Solanum lycopersicum HOM05D005273 ORTHO05D006195 1.4e-170 603.2 349 82.2
Phvul.011G119600 Phaseolus vulgaris HOM05D005273 ORTHO05D006195 1.9e-170 602.8 342 82.5
AT4G22930 Arabidopsis thaliana HOM05D005273 ORTHO05D006195 2.5e-170 602.4 358 81.0
DCAR_013064 Daucus carota HOM05D005273 ORTHO05D006195 2.5e-170 602.4 343 81.6
PGSC0003DMG400028417 Solanum tuberosum HOM05D005273 ORTHO05D006195 3.2e-170 602.1 343 82.8
SalBow1G7481 Salvia bowleyana HOM05D005273 ORTHO05D006195 5.5e-170 601.3 366 79.2
Sopen02g021070 Solanum pennellii HOM05D005273 ORTHO05D006195 5.5e-170 601.3 343 83.1
Phvul.010G107600 Phaseolus vulgaris HOM05D005273 ORTHO05D006195 4.6e-169 598.2 342 82.2
Glyma.06G291600 Glycine max HOM05D005273 ORTHO05D006195 6.0e-169 597.8 342 81.9
Lalb_Chr03g0027211 Lupinus albus HOM05D005273 ORTHO05D006195 2.3e-168 595.9 347 81.0
CAN.G411.45 Capsicum annuum HOM05D005273 ORTHO05D006195 3.0e-168 595.5 352 80.4
SalBow1G1167 Salvia bowleyana HOM05D005273 ORTHO05D006195 3.9e-168 595.1 343 82.2
PSO782G4868 Papaver somniferum HOM05D005273 ORTHO05D006195 5.1e-168 594.7 367 78.5
THA.LOC104814179 Tarenaya hassleriana HOM05D005273 ORTHO05D006195 5.1e-168 594.7 342 83.0
CDE08G0645 Ceratophyllum demersum HOM05D005273 ORTHO05D006195 6.7e-168 594.3 373 76.1
CiPaw.04G127500 Carya illinoinensis HOM05D005273 ORTHO05D006195 1.1e-167 593.6 339 85.0
MELO3C009854.2 Cucumis melo HOM05D005273 ORTHO05D006195 1.5e-167 593.2 375 77.1
PSO478G2492 Papaver somniferum HOM05D005273 ORTHO05D006195 1.5e-167 593.2 367 78.5
Hund09652 Selenicereus undatus HOM05D005273 ORTHO05D006195 1.9e-167 592.8 357 79.3
Lj3g0011026 Lotus japonicus HOM05D005273 ORTHO05D006195 3.3e-167 592.0 342 82.2
ATR0737G119 Amborella trichopoda HOM05D005273 ORTHO05D006195 9.6e-167 590.5 343 81.3
Medtr4g078370 Medicago truncatula HOM05D005273 ORTHO05D006195 1.6e-166 589.7 342 81.0
Psat7g169200 Pisum sativum HOM05D005273 ORTHO05D006195 1.6e-166 589.7 342 81.3
TAR627G0042 Trochodendron aralioides HOM05D005273 ORTHO05D006195 1.6e-166 589.7 378 76.7
arahy.Tifrunner.gnm1.ann1.YR7R6W Arachis hypogaea HOM05D005273 ORTHO05D006195 2.1e-166 589.3 338 81.7
Cc06_g20460 Coffea canephora HOM05D005273 ORTHO05D006195 2.1e-166 589.3 373 76.4
Sc21g0002980 Simmondsia chinensis HOM05D005273 ORTHO05D006195 2.8e-166 589.0 367 76.3
Os01g0747500 Oryza sativa ssp. japonica HOM05D005273 ORTHO05D006195 8.2e-166 587.4 345 79.4
TWI18G0085 Tripterygium wilfordii HOM05D005273 ORTHO05D006195 1.4e-165 586.6 347 82.4
Ah.11g045620 Amaranthus hybridus HOM05D005273 ORTHO05D006195 3.4e-164 582.0 345 80.0
AUR62012902 Chenopodium quinoa HOM05D005273 ORTHO05D006195 3.4e-164 582.0 342 80.1
Aqoxy6G00048 Aquilegia oxysepala HOM05D005273 ORTHO05D006195 7.6e-164 580.9 372 75.8
ECA246G2010 Erigeron canadensis HOM05D005273 ORTHO05D006195 7.6e-164 580.9 344 80.2
HanXRQChr15g0466031 Helianthus annuus HOM05D005273 ORTHO05D006195 2.9e-163 578.9 349 76.2
unitig_899.g15313 Utricularia gibba HOM05D005273 ORTHO05D006195 4.9e-163 578.2 354 78.2
Lsat_1_v5_gn_4_66761 Lactuca sativa HOM05D005273 ORTHO05D006195 1.4e-162 576.6 345 78.0
SGA_v2.0_scaffold25G10971 Striga asiatica HOM05D005273 ORTHO05D006195 1.2e-161 573.5 367 77.1
EL10Ac3g07435 Beta vulgaris HOM05D005273 ORTHO05D006195 1.3e-160 570.1 359 76.9
AUR62011776 Chenopodium quinoa HOM05D005273 ORTHO05D006195 1.9e-159 566.2 406 69.5
HPP92_004898 Vanilla planifolia HOM05D005273 ORTHO05D006195 5.7e-159 564.7 343 77.8
C01p17440 Brassica napus HOM05D000022 ORTHO05D006195 1.6e-158 563.1 368 77.2
Zm00001eb153030 Zea mays HOM05D005273 ORTHO05D006195 2.6e-156 555.8 342 75.4
vmacro12316 Vaccinium macrocarpon HOM05D005273 ORTHO05D006195 3.4e-156 555.4 455 62.6
BcaC09g51057 Brassica carinata HOM05D000022 ORTHO05D006195 3.8e-155 552.0 373 74.3
Rhsim06G0140600 Rhododendron simsii HOM05D005273 ORTHO05D006195 2.7e-153 545.8 470 60.0
Cpa.g.sc83.46 Carica papaya HOM05D005273 ORTHO05D006195 6.1e-153 544.7 348 78.2
SHI10390 Sapria himalayana HOM05D005273 ORTHO05D006195 6.7e-152 541.2 341 75.1
Thecc.01G150900 Theobroma cacao HOM05D005273 ORTHO05D006195 2.0e-148 529.6 276 93.5
Lj5g0005541 Lotus japonicus HOM05D005273 ORTHO05D006195 6.5e-147 524.6 305 82.3
Mapoly0001s0029 Marchantia polymorpha HOM05D005273 ORTHO05D006195 5.1e-144 515.0 358 68.2
SMO347G0496 Selaginella moellendorffii HOM05D005273 ORTHO05D006195 2.8e-142 509.2 341 71.0
Dinv04937 Davidia involucrata HOM05D005273 ORTHO05D006195 3.7e-142 508.8 344 73.3
Pp3c13_8930 Physcomitrium patens HOM05D005273 ORTHO05D006195 4.1e-141 505.4 339 70.5
CBR_g21229 Chara braunii HOM05D005273 ORTHO05D006195 7.2e-130 468.0 329 66.6
Cfa014627 Carpinus fangiana HOM05D005273 ORTHO05D006195 3.4e-127 459.1 404 61.1
MBI07_g30188_MAGBIO Magnolia biondii HOM05D005273 ORTHO05D006195 3.1e-125 452.6 362 63.0
AUR62011723 Chenopodium quinoa HOM05D005273 ORTHO05D006195 2.1e-121 439.9 256 80.5
AUR62024621 Chenopodium quinoa HOM05D005273 ORTHO05D006195 4.0e-120 435.6 253 81.4
Thecc.K0007100 Theobroma cacao HOM05D005273 ORTHO05D006195 1.2e-119 434.1 228 93.4
Cre11.g467550 Chlamydomonas reinhardtii HOM05D005273 ORTHO05D006195 3.7e-118 429.1 339 61.4
Nitab4.5_0006070g0020 Nicotiana tabacum HOM05D005273 ORTHO05D006195 3.1e-117 426.0 311 69.8
Nitab4.5_0000437g0040 Nicotiana tabacum HOM05D005273 ORTHO05D006195 5.4e-117 425.2 311 69.5
BolC1t01684H Brassica oleracea HOM05D005273 ORTHO05D006195 1.3e-115 420.6 236 84.7
MCO16G183 Micromonas commoda HOM05D005273 ORTHO05D006195 1.7e-107 393.7 340 55.0
CSS0013056 Camellia sinensis var. sinensis HOM05D005273 ORTHO05D006195 3.3e-106 389.4 315 63.5
AagrBONN_evm.TU.Sc2ySwM_117.50 Anthoceros agrestis HOM05D005273 ORTHO05D006195 3.7e-102 375.9 245 73.1
CSS0022573 Camellia sinensis var. sinensis HOM05D005273 ORTHO05D006195 3.2e-101 372.9 351 57.5
PRCOL_00003989 Prasinoderma coloniale HOM05D005273 ORTHO05D006195 6.8e-96 355.1 348 52.3
QL08p039454 Quercus lobata HOM05D005273 ORTHO05D006195 2.6e-95 353.2 254 71.7
FAN02G4311 Fragaria x ananassa HOM05D005273 ORTHO05D006195 5.8e-95 352.1 210 81.9
Haze_27262 Corylus avellana HOM05D005273 ORTHO05D006195 4.9e-94 349.0 343 51.9
Lj1C718T2 Lonicera japonica HOM05D005273 ORTHO05D006195 1.2e-84 317.8 190 80.5
Atru.chr6.2977 Acer truncatum HOM05D005273 ORTHO05D006195 1.5e-79 300.8 218 72.0
Actinidia11084 Actinidia chinensis HOM05D005273 ORTHO05D006195 4.4e-79 299.3 172 81.4
SEGI_10566 Sequoiadendron giganteum HOM05D005273 ORTHO05D006195 1.4e-61 241.1 151 76.8
Peaxi162Scf00112g00113 Petunia axillaris HOM05D005273 ORTHO05D006195 1.3e-59 234.6 145 78.6
Lj1A718G26 Lonicera japonica HOM05D005273 ORTHO05D006195 1.8e-51 207.6 114 83.3
Peaxi162Scf00112g00110 Petunia axillaris HOM05D005273 ORTHO05D006195 5.1e-51 206.1 114 81.6
Oeu007130.1 Olea europaea HOM05D005273 ORTHO05D006195 1.1e-50 204.9 347 38.3
Atru.chr6.2976 Acer truncatum HOM05D005273 ORTHO05D006195 9.7e-42 175.3 99 82.8
EL10Ac9g21222 Beta vulgaris HOM05D005273 ORTHO05D006195 1.6e-41 174.5 276 43.5
TPR.G7356 Trifolium pratense HOM05D005273 ORTHO05D006195 8.2e-41 172.2 94 86.2
Cfa022577 Carpinus fangiana HOM05D005273 ORTHO05D006195 5.1e-35 152.9 360 33.1
BcaNung01011 Brassica carinata HOM05D005273 ORTHO05D006195 2.6e-23 114.0 262 33.2
Lj3g0005703 Lotus japonicus HOM05D002777 ORTHO05D001516 7.7e-23 112.5 81 72.8
AUR62041872 Chenopodium quinoa HOM05D005273 ORTHO05D006195 1.3e-22 111.7 95 57.9
AUR62036776 Chenopodium quinoa HOM05D005273 ORTHO05D006195 1.0e-19 102.1 168 41.1
Lalb_Chr09g0333161 Lupinus albus HOM05D005273 ORTHO05D006195 8.2e-17 92.4 87 55.2
TPR.G31736 Trifolium pratense HOM05D005273 ORTHO05D006195 1.2e-12 78.6 45 80.0
Lj5A796T26 Lonicera japonica HOM05D005273 ORTHO05D006195 4.4e-10 70.1 42 71.4


User provided reference genes

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