Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib145G0007 Durio zibethinus HOM05D003374 ORTHO05D009470 1.3e-51 206.1 101 100.0
Duzib147G0965 Durio zibethinus HOM05D003374 ORTHO05D009470 1.4e-37 159.5 76 100.0
Duzib145G0002 Durio zibethinus HOM05D003374 ORTHO05D009470 1.0e-27 126.7 72 86.1
Thecc.01G011500 Theobroma cacao HOM05D003374 ORTHO05D009470 9.7e-23 110.2 61 85.2
Gohir.D03G005500 Gossypium hirsutum HOM05D003374 ORTHO05D009470 2.7e-17 92.0 61 72.1
Gorai.003G005900 Gossypium raimondii HOM05D003374 ORTHO05D009470 2.7e-17 92.0 61 72.1
Gohir.A02G174300 Gossypium hirsutum HOM05D003374 ORTHO05D009470 5.1e-16 87.8 61 70.5
Haze_03703 Corylus avellana HOM05D003374 ORTHO05D009415 6.7e-16 87.4 65 66.2
CiPaw.08G125800 Carya illinoinensis HOM05D003374 ORTHO05D009470 2.0e-15 85.9 63 66.7
QL06p052079 Quercus lobata HOM05D003374 ORTHO05D009470 5.7e-15 84.3 63 68.3
Prupe.7G175000 Prunus persica HOM05D003374 ORTHO05D009470 1.7e-14 82.8 61 65.6
Cfa007029 Carpinus fangiana HOM05D003374 ORTHO05D009470 3.7e-14 81.6 65 61.5
Ciclev10026638m.g Citrus clementina HOM05D003374 ORTHO05D009470 4.1e-13 78.2 63 58.7
Potri.005G107800 Populus trichocarpa HOM05D003374 ORTHO05D009470 2.6e-12 75.5 61 63.9
Cc07_g11310 Coffea canephora HOM05D003374 ORTHO05D009470 3.5e-12 75.1 59 64.4
Cc08_g04880 Coffea canephora HOM05D003374 ORTHO05D009470 3.5e-12 75.1 59 64.4
MD15G1237400 Malus domestica HOM05D003374 ORTHO05D009470 1.0e-11 73.6 67 58.2
PSO675G4674 Papaver somniferum HOM05D003374 ORTHO05D009470 1.3e-11 73.2 89 44.9
Sabra05G0088300 Salix brachista HOM05D003374 ORTHO05D009470 1.3e-11 73.2 61 62.3
FAN23G1041 Fragaria x ananassa HOM05D003374 ORTHO05D009470 5.0e-11 71.2 61 57.4
vmacro20496 Vaccinium macrocarpon HOM05D003374 ORTHO05D009470 6.5e-11 70.9 63 60.3
Atru.chr3.907 Acer truncatum HOM05D003374 ORTHO05D009470 1.5e-10 69.7 58 58.6
PSO541G4788 Papaver somniferum HOM05D003374 ORTHO05D009470 1.5e-10 69.7 89 43.8
Cpa.g.sc6.313 Carica papaya HOM05D003374 ORTHO05D009470 1.9e-10 69.3 58 58.6
FAN28G2426 Fragaria x ananassa HOM05D003374 ORTHO05D009470 1.9e-10 69.3 61 55.7
RcHm_v2.0_Chr2g0098351 Rosa chinensis HOM05D003374 ORTHO05D009470 2.5e-10 68.9 61 57.4
FvH4_1g11080 Fragaria vesca HOM05D003374 ORTHO05D009470 3.2e-10 68.6 61 55.7
MBI09_g46000_MAGBIO Magnolia biondii HOM05D003374 ORTHO05D009470 3.2e-10 68.6 59 59.3
FAN26G1101 Fragaria x ananassa HOM05D003374 ORTHO05D009470 5.5e-10 67.8 69 50.7
Manes.02G110400 Manihot esculenta HOM05D003374 ORTHO05D009470 7.2e-10 67.4 63 58.7
Dinv08548 Davidia involucrata HOM05D003374 ORTHO05D009470 1.2e-09 66.6 58 62.1
Hma1.2p1_0315F.1_g122600 Hydrangea macrophylla HOM05D003374 ORTHO05D009470 1.2e-09 66.6 60 58.3
Rhsim10G0205800 Rhododendron simsii HOM05D003374 ORTHO05D009470 1.2e-09 66.6 65 55.4
TWI73G0454 Tripterygium wilfordii HOM05D003374 ORTHO05D009470 1.6e-09 66.2 56 58.9
TAR625G1139 Trochodendron aralioides HOM05D003374 ORTHO05D009470 1.6e-09 66.2 57 59.6
EL10Ac9g21336 Beta vulgaris HOM05D003374 ORTHO05D009470 2.1e-09 65.9 60 56.7
CDE05G3297 Ceratophyllum demersum HOM05D003374 ORTHO05D009470 2.7e-09 65.5 74 50.0
Phvul.002G104800 Phaseolus vulgaris HOM05D003374 ORTHO05D009470 2.7e-09 65.5 71 49.3
CSS0026426 Camellia sinensis var. sinensis HOM05D003374 ORTHO05D009415 4.7e-09 64.7 58 56.9
CANSAT01G1253 Cannabis sativa HOM05D003374 ORTHO05D009470 4.7e-09 64.7 61 50.8
Potri.005G107900 Populus trichocarpa HOM05D003374 ORTHO05D009470 4.7e-09 64.7 63 54.0
arahy.Tifrunner.gnm1.ann1.HG61QK Arachis hypogaea HOM05D003374 ORTHO05D009470 8.0e-09 63.9 68 52.9
arahy.Tifrunner.gnm1.ann1.YP763J Arachis hypogaea HOM05D003374 ORTHO05D009470 8.0e-09 63.9 68 52.9
CDE05G2149 Ceratophyllum demersum HOM05D003374 ORTHO05D009470 8.0e-09 63.9 71 47.9
Medtr5g022970 Medicago truncatula HOM05D003374 ORTHO05D009470 8.0e-09 63.9 67 56.7
Ca_24942_v3 Cicer arietinum L. HOM05D003374 ORTHO05D009470 1.0e-08 63.5 66 54.5
Lalb_Chr09g0321441 Lupinus albus HOM05D003374 ORTHO05D009470 1.0e-08 63.5 63 47.6
Nitab4.5_0006892g0010 Nicotiana tabacum HOM05D003374 ORTHO05D009470 4.0e-08 61.6 58 60.3
Lj2g0014457 Lotus japonicus HOM05D003374 ORTHO05D009470 5.2e-08 61.2 66 48.5
VMungo1215G1047 Vigna mungo HOM05D003374 ORTHO05D009470 5.2e-08 61.2 77 50.6
GSVIVG01005193001 Vitis vinifera HOM05D003374 ORTHO05D009470 5.2e-08 61.2 59 52.5
Eucgr.I02305 Eucalyptus grandis HOM05D003374 ORTHO05D009470 6.7e-08 60.8 65 52.3
Glyma.01G162500 Glycine max HOM05D003374 ORTHO05D009470 6.7e-08 60.8 45 57.8
Glyma.11G080800 Glycine max HOM05D003374 ORTHO05D009470 6.7e-08 60.8 68 47.1
Aqoxy6G01986 Aquilegia oxysepala HOM05D003374 ORTHO05D009470 2.0e-07 59.3 57 54.4
FAN19G0939 Fragaria x ananassa HOM05D003374 ORTHO05D009470 2.0e-07 59.3 74 45.9
Hund00012 Selenicereus undatus HOM05D003374 ORTHO05D009470 2.0e-07 59.3 41 70.7
PGR102G2171 Punica granatum HOM05D003374 ORTHO05D009470 2.6e-07 58.9 61 49.2
AUR62010008 Chenopodium quinoa HOM05D003374 ORTHO05D010386 3.3e-07 58.5 32 75.0
AUR62012999 Chenopodium quinoa HOM05D003374 ORTHO05D009470 3.3e-07 58.5 32 75.0
PGSC0003DMG400003663 Solanum tuberosum HOM05D003374 ORTHO05D009470 4.4e-07 58.2 58 53.4
Nitab4.5_0002105g0080 Nicotiana tabacum HOM05D003374 ORTHO05D009470 5.7e-07 57.8 58 56.9
Sopen02g028160 Solanum pennellii HOM05D003374 ORTHO05D009470 7.5e-07 57.4 48 58.3
MSTRG.22233 Avicennia marina HOM05D003374 ORTHO05D009470 9.7e-07 57.0 60 48.3
CAN.G890.28 Capsicum annuum HOM05D003374 ORTHO05D009470 9.7e-07 57.0 38 68.4
Peaxi162Scf00328g00118 Petunia axillaris HOM05D003374 ORTHO05D009470 9.7e-07 57.0 56 60.7
TPR.G20269 Trifolium pratense HOM05D003374 ORTHO05D009470 9.7e-07 57.0 53 56.6
Lalb_Chr05g0212181 Lupinus albus HOM05D003374 ORTHO05D009470 1.3e-06 56.6 56 50.0
SalBow8G5385 Salvia bowleyana HOM05D003374 ORTHO05D009470 2.8e-06 55.5 68 41.2
Solyc02g083380.3 Solanum lycopersicum HOM05D003374 ORTHO05D009470 3.7e-06 55.1 43 60.5
SalBow6G5967 Salvia bowleyana HOM05D003374 ORTHO05D009470 4.8e-06 54.7 69 43.5
THA.LOC104804280 Tarenaya hassleriana HOM05D003374 ORTHO05D009470 4.8e-06 54.7 53 56.6
Oeu022073.1 Olea europaea HOM05D003374 ORTHO05D009470 6.3e-06 54.3 53 52.8


User provided reference genes

Program Settings