Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib138G1502 Durio zibethinus HOM05D006057 ORTHO05D007224 1.1e-64 250.0 136 100.0
COL.COLO4_23092 Corchorus olitorius HOM05D006057 ORTHO05D007224 7.8e-52 207.2 132 85.6
Gohir.D12G122500 Gossypium hirsutum HOM05D006057 ORTHO05D007224 3.1e-48 195.3 137 81.0
Gorai.008G133300 Gossypium raimondii HOM05D006057 ORTHO05D007224 2.6e-47 192.2 137 80.3
Gohir.A12G118700 Gossypium hirsutum HOM05D006057 ORTHO05D007224 7.1e-45 184.1 137 76.6
QL09p037524 Quercus lobata HOM05D006057 ORTHO05D007224 4.6e-44 181.4 135 73.3
Atru.chr5.830 Acer truncatum HOM05D006057 ORTHO05D007224 1.6e-41 172.9 136 72.1
Eucgr.A00985 Eucalyptus grandis HOM05D006057 ORTHO05D007224 1.4e-40 169.9 136 66.2
Gohir.A07G132650 Gossypium hirsutum HOM05D006057 ORTHO05D007224 3.1e-40 168.7 106 83.0
Potri.014G110300 Populus trichocarpa HOM05D006057 ORTHO05D007224 5.3e-40 167.9 127 71.7
Manes.05G006500 Manihot esculenta HOM05D006057 ORTHO05D007224 6.9e-40 167.5 136 67.6
TAR633G2394 Trochodendron aralioides HOM05D006057 ORTHO05D007224 1.1e-37 160.2 136 69.1
Sp6g39640 Schrenkiella parvula HOM05D006057 ORTHO05D007224 4.6e-36 154.8 130 63.8
Ciclev10023548m.g Citrus clementina HOM05D006057 ORTHO05D007224 1.0e-35 153.7 120 70.0
BcaB05g21854 Brassica carinata HOM05D006057 ORTHO05D007224 1.8e-35 152.9 130 63.8
TWI14G0531 Tripterygium wilfordii HOM05D006057 ORTHO05D007224 1.8e-35 152.9 136 64.7
Haze_05170 Corylus avellana HOM05D006057 ORTHO05D007224 3.0e-35 152.1 120 70.8
CSS0031729 Camellia sinensis var. sinensis HOM05D006057 ORTHO05D007224 8.7e-35 150.6 136 64.7
Aa31LG1G21980 Aethionema arabicum HOM05D006057 ORTHO05D007224 1.1e-34 150.2 137 62.0
PGR042G0310 Punica granatum HOM05D006057 ORTHO05D007224 1.1e-34 150.2 133 60.2
Sabra02G0131200 Salix brachista HOM05D006057 ORTHO05D007224 1.5e-34 149.8 110 71.8
arahy.Tifrunner.gnm1.ann1.78VVNS Arachis hypogaea HOM05D006057 ORTHO05D007224 3.3e-34 148.7 127 67.7
BcaC06g32028 Brassica carinata HOM05D006057 ORTHO05D007224 3.3e-34 148.7 135 61.5
BraA02t04741Z Brassica rapa HOM05D006057 ORTHO05D007224 3.3e-34 148.7 130 61.5
Hma1.2p1_0350F.1_g132530 Hydrangea macrophylla HOM05D006057 ORTHO05D007224 3.3e-34 148.7 131 66.4
BcaC03g13034 Brassica carinata HOM05D006057 ORTHO05D007224 5.6e-34 147.9 130 61.5
BcaC03g13036 Brassica carinata HOM05D006057 ORTHO05D007224 5.6e-34 147.9 130 61.5
CARHR210270 Cardamine hirsuta HOM05D006057 ORTHO05D007224 9.6e-34 147.1 132 62.9
Medtr1g085440 Medicago truncatula HOM05D006057 ORTHO05D007224 9.6e-34 147.1 119 68.9
BraA10t45317Z Brassica rapa HOM05D006057 ORTHO05D007224 1.3e-33 146.7 137 61.3
Medtr4g118050 Medicago truncatula HOM05D006057 ORTHO05D007224 1.3e-33 146.7 121 68.6
GSVIVG01028268001 Vitis vinifera HOM05D006057 ORTHO05D007224 1.3e-33 146.7 120 68.3
arahy.Tifrunner.gnm1.ann1.TF3SPP Arachis hypogaea HOM05D006057 ORTHO05D007224 1.6e-33 146.4 127 66.9
TPR.G3097 Trifolium pratense HOM05D006057 ORTHO05D007224 1.6e-33 146.4 119 68.1
Cpa.g.sc57.50 Carica papaya HOM05D006057 ORTHO05D007224 2.1e-33 146.0 135 63.0
BcaC06g32027 Brassica carinata HOM05D006057 ORTHO05D007224 3.7e-33 145.2 135 60.0
BcaNung04734 Brassica carinata HOM05D006057 ORTHO05D007224 3.7e-33 145.2 135 60.0
BolC9t60103H Brassica oleracea HOM05D006057 ORTHO05D007224 3.7e-33 145.2 135 60.0
Thhalv10015298m.g Eutrema salsugineum HOM05D006057 ORTHO05D007224 3.7e-33 145.2 120 65.0
RcHm_v2.0_Chr2g0148291 Rosa chinensis HOM05D006057 ORTHO05D007224 4.8e-33 144.8 136 58.8
Medtr1g085355 Medicago truncatula HOM05D006057 ORTHO05D007224 6.2e-33 144.4 122 68.9
AL6G12340 Arabidopsis lyrata HOM05D006057 ORTHO05D007224 8.2e-33 144.1 136 59.6
Psat6g157560 Pisum sativum HOM05D006057 ORTHO05D007224 8.2e-33 144.1 128 64.8
Prupe.3G028700 Prunus persica HOM05D006057 ORTHO05D007224 1.1e-32 143.7 136 61.8
C09p73700 Brassica napus HOM05D006057 ORTHO05D007224 1.8e-32 142.9 135 59.3
BolC9t60100H Brassica oleracea HOM05D006057 ORTHO05D007224 1.8e-32 142.9 135 59.3
Carub.0006s0184 Capsella rubella HOM05D006057 ORTHO05D007224 1.8e-32 142.9 136 60.3
Nn4g25242 Nelumbo nucifera HOM05D006057 ORTHO05D007224 2.4e-32 142.5 129 63.6
C02p00760 Brassica napus HOM05D006057 ORTHO05D007224 4.0e-32 141.7 130 60.0
BolC2t06074H Brassica oleracea HOM05D006057 ORTHO05D007224 4.0e-32 141.7 130 60.0
Lj5g0024678 Lotus japonicus HOM05D006057 ORTHO05D007224 5.3e-32 141.4 119 66.4
TWI59G0504 Tripterygium wilfordii HOM05D006057 ORTHO05D007224 5.3e-32 141.4 136 64.7
AT5G03050 Arabidopsis thaliana HOM05D006057 ORTHO05D007224 6.9e-32 141.0 136 58.8
Ca_10224_v3 Cicer arietinum L. HOM05D006057 ORTHO05D007224 6.9e-32 141.0 121 65.3
Glyma.10G140400 Glycine max HOM05D006057 ORTHO05D007224 1.2e-31 140.2 127 66.1
Nitab4.5_0002046g0150 Nicotiana tabacum HOM05D006057 ORTHO05D007224 1.2e-31 140.2 130 60.8
Sed0018142 Sechium edule HOM05D006057 ORTHO05D007224 2.0e-31 139.4 130 62.3
MBI18_g03875_MAGBIO Magnolia biondii HOM05D006057 ORTHO05D007224 2.6e-31 139.0 136 59.6
vmacro02351 Vaccinium macrocarpon HOM05D006057 ORTHO05D007224 2.6e-31 139.0 136 60.3
Nitab4.5_0002450g0080 Nicotiana tabacum HOM05D006057 ORTHO05D007224 3.4e-31 138.7 130 60.0
Lju2566A1T37 Lonicera japonica HOM05D006057 ORTHO05D007224 4.5e-31 138.3 130 60.8
SHI19776 Sapria himalayana HOM05D006057 ORTHO05D007224 4.5e-31 138.3 111 62.2
MD17G1156700 Malus domestica HOM05D006057 ORTHO05D007224 5.8e-31 137.9 136 58.1
Lj1C4G2 Lonicera japonica HOM05D006057 ORTHO05D007224 7.6e-31 137.5 130 60.8
ClCG10G013240 Citrullus lanatus HOM05D006057 ORTHO05D007224 1.0e-30 137.1 130 63.1
ECA238G2998 Erigeron canadensis HOM05D006057 ORTHO05D007224 2.2e-30 136.0 130 62.3
Rhsim01G0001300 Rhododendron simsii HOM05D006057 ORTHO05D007224 4.9e-30 134.8 136 58.8
Peaxi162Scf00314g00430 Petunia axillaris HOM05D006057 ORTHO05D007224 6.5e-30 134.4 130 57.7
Sopen03g037330 Solanum pennellii HOM05D006057 ORTHO05D007224 6.5e-30 134.4 130 58.5
CANSAT25G1403 Cannabis sativa HOM05D006057 ORTHO05D007224 8.4e-30 134.0 134 59.0
CsaV3_3G043390 Cucumis sativus L. HOM05D006057 ORTHO05D007224 1.1e-29 133.7 130 63.1
FvH4_6g36280 Fragaria vesca HOM05D006057 ORTHO05D007224 1.1e-29 133.7 130 59.2
Solyc03g118440.3 Solanum lycopersicum HOM05D006057 ORTHO05D007224 1.1e-29 133.7 130 58.5
BcaNung05509 Brassica carinata HOM05D006057 ORTHO05D007224 1.4e-29 133.3 149 53.0
Phvul.007G207500 Phaseolus vulgaris HOM05D006057 ORTHO05D007224 1.9e-29 132.9 135 58.5
PGSC0003DMG400014183 Solanum tuberosum HOM05D006057 ORTHO05D007224 2.5e-29 132.5 130 57.7
MELO3C026900.2 Cucumis melo HOM05D006057 ORTHO05D007224 7.1e-29 131.0 130 61.5
Lalb_Chr02g0147311 Lupinus albus HOM05D006057 ORTHO05D007224 9.3e-29 130.6 129 63.6
VMungo0720G1137 Vigna mungo HOM05D006057 ORTHO05D007224 4.6e-28 128.3 102 67.6
CDE01G0754 Ceratophyllum demersum HOM05D006057 ORTHO05D007224 7.9e-28 127.5 130 58.5
Oeu048368.1 Olea europaea HOM05D006057 ORTHO05D007224 1.8e-27 126.3 130 54.6
Aqoxy5G02874 Aquilegia oxysepala HOM05D006057 ORTHO05D007224 3.0e-27 125.6 136 58.1
Lsat_1_v5_gn_2_108401 Lactuca sativa HOM05D006057 ORTHO05D007224 3.0e-27 125.6 125 58.4
CAN.G843.33 Capsicum annuum HOM05D006057 ORTHO05D007224 3.9e-27 125.2 130 54.6
PSO339G1810 Papaver somniferum HOM05D006057 ORTHO05D007224 3.9e-27 125.2 127 58.3
Potri.002G184600 Populus trichocarpa HOM05D006057 ORTHO05D007224 8.7e-27 124.0 103 66.0
Glyma.20G089200 Glycine max HOM05D006057 ORTHO05D007224 1.1e-26 123.6 136 55.9
Migut.L00831 Erythranthe guttata HOM05D006057 ORTHO05D007224 1.5e-26 123.2 107 58.9
HanXRQChr07g0194641 Helianthus annuus HOM05D006057 ORTHO05D007224 1.5e-26 123.2 130 56.9
PSO170G4276 Papaver somniferum HOM05D006057 ORTHO05D007224 3.3e-26 122.1 124 56.5
Migut.L01023 Erythranthe guttata HOM05D006057 ORTHO05D007224 9.7e-26 120.6 130 51.5
Migut.L00999 Erythranthe guttata HOM05D006057 ORTHO05D007224 1.3e-25 120.2 100 62.0
Actinidia21332 Actinidia chinensis HOM05D006057 ORTHO05D007224 1.6e-25 119.8 137 53.3
Nitab4.5_0001841g0090 Nicotiana tabacum HOM05D006057 ORTHO05D007224 2.2e-25 119.4 137 54.7
PSO081G0045 Papaver somniferum HOM05D006057 ORTHO05D007224 2.8e-25 119.0 124 57.3
Cc08_g05070 Coffea canephora HOM05D006057 ORTHO05D007224 3.7e-25 118.6 106 63.2
Hund22023 Selenicereus undatus HOM05D006057 ORTHO05D007224 6.3e-25 117.9 124 55.6
Sc09g0000780 Simmondsia chinensis HOM05D006057 ORTHO05D007224 8.2e-25 117.5 130 53.8
SGA_v2.0_scaffold38G15005 Striga asiatica HOM05D006057 ORTHO05D007224 1.8e-24 116.3 133 51.1
Nitab4.5_0010904g0040 Nicotiana tabacum HOM05D006057 ORTHO05D007224 9.0e-24 114.0 135 53.3
Ah.06g194050 Amaranthus hybridus HOM05D006057 ORTHO05D007224 1.2e-23 113.6 128 53.1
SGA_v2.0_scaffold36G14563 Striga asiatica HOM05D006057 ORTHO05D007224 2.0e-23 112.8 133 51.1
Ah.04g162100 Amaranthus hybridus HOM05D006057 ORTHO05D007224 2.6e-23 112.5 130 53.1
DCAR_012291 Daucus carota HOM05D006057 ORTHO05D007224 5.9e-23 111.3 136 50.7
DCAR_012292 Daucus carota HOM05D006057 ORTHO05D007224 1.7e-22 109.8 136 48.5
Gorai.001G149000 Gossypium raimondii HOM05D006057 ORTHO05D007224 1.7e-22 109.8 136 52.2
AUR62000136 Chenopodium quinoa HOM05D006057 ORTHO05D007224 2.9e-22 109.0 110 54.5
EL10Ac4g10232 Beta vulgaris HOM05D006057 ORTHO05D007224 5.0e-22 108.2 128 50.0
CiPaw.07G127700 Carya illinoinensis HOM05D006057 ORTHO05D007224 9.4e-21 104.0 115 53.9
AUR62019316 Chenopodium quinoa HOM05D006057 ORTHO05D007224 9.4e-21 104.0 129 48.8
Gohir.D07G136950 Gossypium hirsutum HOM05D006057 ORTHO05D007224 9.4e-21 104.0 136 51.5
SEGI_31615 Sequoiadendron giganteum HOM05D006057 ORTHO05D007224 1.6e-20 103.2 98 58.2
HPP92_026861 Vanilla planifolia HOM05D006057 ORTHO05D007224 4.6e-20 101.7 129 50.4
unitig_26.g10007 Utricularia gibba HOM05D006057 ORTHO05D007224 6.1e-20 101.3 128 45.3
ATR0019G040 Amborella trichopoda HOM05D006057 ORTHO05D007224 1.8e-19 99.8 94 55.3
BcaNung05508 Brassica carinata HOM05D006057 ORTHO05D007224 4.3e-18 95.1 121 45.5
CDE12G0816 Ceratophyllum demersum HOM05D006057 ORTHO05D007224 4.8e-17 91.7 195 37.9
Dinv05504 Davidia involucrata HOM05D006057 ORTHO05D007224 8.2e-17 90.9 91 61.5
TPR.G3076 Trifolium pratense HOM05D006057 ORTHO05D007224 8.2e-17 90.9 84 63.1
Os03g0108700 Oryza sativa ssp. japonica HOM05D006057 ORTHO05D007224 3.8e-14 82.0 81 53.1
Zm00001eb000680 Zea mays HOM05D006057 ORTHO05D007224 3.8e-14 82.0 112 45.5
SMO361G0765 Selaginella moellendorffii HOM05D006057 ORTHO05D007224 6.5e-14 81.3 83 50.6
Pp3c25_8550 Physcomitrium patens HOM05D006057 ORTHO05D007224 8.2e-09 64.3 109 33.9
CBR_g39249 Chara braunii HOM05D006057 ORTHO05D007224 4.5e-07 58.5 112 34.8
Mapoly0076s0084 Marchantia polymorpha HOM05D006057 ORTHO05D007224 1.3e-06 57.0 134 31.3


User provided reference genes

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