Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib138G1421 Durio zibethinus HOM05D007841 ORTHO05D009919 8.7e-34 146.4 72 100.0
Gohir.D12G101400 Gossypium hirsutum HOM05D007841 ORTHO05D009919 1.6e-32 142.1 72 97.2
Gorai.008G110500 Gossypium raimondii HOM05D007841 ORTHO05D009919 1.6e-32 142.1 72 97.2
Gohir.A12G098200 Gossypium hirsutum HOM05D007841 ORTHO05D009919 1.4e-31 139.0 72 94.4
Prupe.2G120100 Prunus persica HOM05D007841 ORTHO05D009919 7.6e-30 133.3 72 88.9
CiPaw.14G018000 Carya illinoinensis HOM05D007841 ORTHO05D009919 8.4e-29 129.8 72 86.1
Phvul.008G138900 Phaseolus vulgaris HOM05D007841 ORTHO05D009919 8.4e-29 129.8 72 87.5
Atru.chr5.91 Acer truncatum HOM05D007841 ORTHO05D009919 1.4e-28 129.0 75 88.0
COL.COLO4_12370 Corchorus olitorius HOM05D007841 ORTHO05D009919 1.9e-28 128.6 72 87.5
Medtr7g050540 Medicago truncatula HOM05D007841 ORTHO05D009919 2.5e-28 128.3 72 87.5
PGR004G1954 Punica granatum HOM05D007841 ORTHO05D009919 4.2e-28 127.5 70 88.6
Eucgr.D01199 Eucalyptus grandis HOM05D007841 ORTHO05D009919 5.5e-28 127.1 72 86.1
Thecc.01G400700 Theobroma cacao HOM05D007841 ORTHO05D009919 5.5e-28 127.1 74 90.5
Oeu034848.1 Olea europaea HOM05D007841 ORTHO05D009919 7.1e-28 126.7 72 84.7
Psat3g152880 Pisum sativum HOM05D007841 ORTHO05D009919 7.1e-28 126.7 72 86.1
EL10Ac1g00736 Beta vulgaris HOM05D007841 ORTHO05D009919 9.3e-28 126.3 72 84.7
Glyma.08G340600 Glycine max HOM05D007841 ORTHO05D009919 9.3e-28 126.3 72 87.5
Lj1g0014858 Lotus japonicus HOM05D007841 ORTHO05D009919 9.3e-28 126.3 72 87.5
Potri.014G051850 Populus trichocarpa HOM05D007841 ORTHO05D009919 1.2e-27 125.9 72 84.7
MD02G1221100 Malus domestica HOM05D007841 ORTHO05D009919 1.6e-27 125.6 72 84.7
Hma1.2p1_2138F.1_g314930 Hydrangea macrophylla HOM05D007841 ORTHO05D009919 2.1e-27 125.2 71 84.5
CANSAT25G3347 Cannabis sativa HOM05D007841 ORTHO05D009919 2.7e-27 124.8 65 92.3
CANSAT25G3825 Cannabis sativa HOM05D007841 ORTHO05D009919 2.7e-27 124.8 65 92.3
arahy.Tifrunner.gnm1.ann1.K94MSK Arachis hypogaea HOM05D007841 ORTHO05D009919 4.6e-27 124.0 69 85.5
CsaV3_3G010620 Cucumis sativus L. HOM05D007841 ORTHO05D009919 6.0e-27 123.6 70 85.7
RcHm_v2.0_Chr1g0345181 Rosa chinensis HOM05D007841 ORTHO05D009919 6.0e-27 123.6 71 84.5
Lalb_Chr03g0040951 Lupinus albus HOM05D007841 ORTHO05D009919 1.3e-26 122.5 72 83.3
THA.LOC104814059 Tarenaya hassleriana HOM05D007841 ORTHO05D009919 1.3e-26 122.5 66 90.9
HanXRQChr01g0019691 Helianthus annuus HOM05D007841 ORTHO05D009919 1.8e-26 122.1 65 89.2
Manes.05G057100 Manihot esculenta HOM05D007841 ORTHO05D009919 1.8e-26 122.1 66 87.9
MD07G1096500 Malus domestica HOM05D007841 ORTHO05D009919 2.3e-26 121.7 71 85.9
AL1G10060 Arabidopsis lyrata HOM05D007841 ORTHO05D009919 3.9e-26 120.9 72 81.9
CARHR000160 Cardamine hirsuta HOM05D007841 ORTHO05D009919 3.9e-26 120.9 68 86.8
Actinidia30942 Actinidia chinensis HOM05D007841 ORTHO05D009919 5.1e-26 120.6 73 83.6
AT1G02160 Arabidopsis thaliana HOM05D007841 ORTHO05D009919 5.1e-26 120.6 72 80.6
Carub.0001s0004 Capsella rubella HOM05D007841 ORTHO05D009919 6.7e-26 120.2 72 80.6
BcaB03g13636 Brassica carinata HOM05D000300 ORTHO05D000383 8.7e-26 119.8 73 82.2
ClCG05G003010 Citrullus lanatus HOM05D007841 ORTHO05D009919 1.1e-25 119.4 71 81.7
ECA248G0141 Erigeron canadensis HOM05D007841 ORTHO05D009919 1.5e-25 119.0 65 87.7
Thhalv10009237m.g Eutrema salsugineum HOM05D007841 ORTHO05D009919 1.5e-25 119.0 63 90.5
Lsat_1_v5_gn_1_83981 Lactuca sativa HOM05D007841 ORTHO05D009919 2.5e-25 118.2 71 80.3
Solyc01g088770.3 Solanum lycopersicum HOM05D007841 ORTHO05D009919 2.5e-25 118.2 70 80.0
Sopen01g035610 Solanum pennellii HOM05D007841 ORTHO05D009919 2.5e-25 118.2 70 80.0
PGSC0003DMG400001726 Solanum tuberosum HOM05D007841 ORTHO05D009919 2.5e-25 118.2 70 80.0
C05p00040 Brassica napus HOM05D007841 ORTHO05D009919 3.3e-25 117.9 73 80.8
BolC5t28791H Brassica oleracea HOM05D007841 ORTHO05D009919 3.3e-25 117.9 73 80.8
CAN.G756.38 Capsicum annuum HOM05D007841 ORTHO05D009919 3.3e-25 117.9 70 81.4
Cc02_g25410 Coffea canephora HOM05D007841 ORTHO05D009919 3.3e-25 117.9 70 78.6
Sed0011386 Sechium edule HOM05D007841 ORTHO05D009919 4.3e-25 117.5 70 82.9
Aqoxy7G00835 Aquilegia oxysepala HOM05D007841 ORTHO05D009919 9.6e-25 116.3 65 89.2
PSO675G0834 Papaver somniferum HOM05D007841 ORTHO05D009919 4.8e-24 114.0 63 85.7
FvH4_7g09140 Fragaria vesca HOM05D007841 ORTHO05D009919 2.4e-23 111.7 71 78.9
PSO732G0215 Papaver somniferum HOM05D007841 ORTHO05D009919 2.4e-23 111.7 63 84.1
Hund17114 Selenicereus undatus HOM05D007841 ORTHO05D009919 2.0e-22 108.6 56 89.3
Zm00001eb067220 Zea mays HOM05D007841 ORTHO05D009919 3.4e-22 107.8 65 84.6
Migut.N01723 Erythranthe guttata HOM05D007841 ORTHO05D009919 5.8e-22 107.1 66 78.8
Os04g0665000 Oryza sativa ssp. japonica HOM05D007841 ORTHO05D009919 7.6e-22 106.7 68 80.9
Haze_02887 Corylus avellana HOM05D000061 ORTHO05D000915 1.0e-21 106.3 60 78.3
FAN06G3108 Fragaria x ananassa HOM05D007841 ORTHO05D009919 6.5e-21 103.6 66 77.3
GSVIVG01018320001 Vitis vinifera HOM05D007841 ORTHO05D009919 1.4e-20 102.4 72 72.2
arahy.Tifrunner.gnm1.ann1.X5EUJ4 Arachis hypogaea HOM05D007841 ORTHO05D009919 5.5e-20 100.5 54 85.2
Sc02g0003210 Simmondsia chinensis HOM05D007841 ORTHO05D009919 7.1e-20 100.1 55 83.6
unitig_22.g6702 Utricularia gibba HOM05D007841 ORTHO05D009919 3.5e-19 97.8 63 73.0
Nitab4.5_0004425g0050 Nicotiana tabacum HOM05D007841 ORTHO05D009919 1.8e-18 95.5 62 72.6
CSS0006405 Camellia sinensis var. sinensis HOM05D007841 ORTHO05D009919 2.3e-18 95.1 55 80.0
Ciclev10023064m.g Citrus clementina HOM05D007841 ORTHO05D009919 2.3e-18 95.1 50 86.0
SalBow4G0679 Salvia bowleyana HOM05D007841 ORTHO05D009919 5.1e-18 94.0 55 76.4
Peaxi162Scf00793g00363 Petunia axillaris HOM05D007841 ORTHO05D009919 6.7e-18 93.6 50 86.0
Nn6g33742 Nelumbo nucifera HOM05D007841 ORTHO05D009919 8.7e-18 93.2 56 75.0
BraA10t42285Z Brassica rapa HOM05D007841 ORTHO05D009919 1.9e-17 92.0 58 75.9
AUR62023385 Chenopodium quinoa HOM05D007841 ORTHO05D009919 2.5e-17 91.7 56 76.8
AUR62013771 Chenopodium quinoa HOM05D007841 ORTHO05D009919 3.3e-17 91.3 56 76.8
Sp1g00090 Schrenkiella parvula HOM05D007841 ORTHO05D009919 3.3e-17 91.3 52 80.8
FAN01G1055 Fragaria x ananassa HOM05D007841 ORTHO05D009919 1.6e-16 89.0 69 68.1
FAN03G2201 Fragaria x ananassa HOM05D007841 ORTHO05D009919 1.6e-16 89.0 69 68.1
PSO732G0130 Papaver somniferum HOM05D007841 ORTHO05D009919 2.2e-16 88.6 47 83.0
Aa31LG1G11570 Aethionema arabicum HOM05D007841 ORTHO05D009919 2.6e-14 81.6 48 83.3
Sabra14G0036700 Salix brachista HOM05D007841 ORTHO05D009919 5.9e-14 80.5 41 95.1
Pp3c22_2080 Physcomitrium patens HOM05D007841 ORTHO05D009919 1.7e-13 79.0 64 60.9
TAR375G0262 Trochodendron aralioides HOM05D006103 ORTHO05D007468 1.6e-11 72.4 45 80.0
AagrBONN_evm.TU.Sc2ySwM_228.3132 Anthoceros agrestis HOM05D007841 ORTHO05D009919 6.1e-11 70.5 53 62.3
Mapoly0181s0011 Marchantia polymorpha HOM05D007841 ORTHO05D009919 3.0e-10 68.2 70 50.0
Actinidia05779 Actinidia chinensis HOM05D007841 ORTHO05D009919 1.1e-09 66.2 33 87.9
CAN.G756.35 Capsicum annuum HOM05D007841 ORTHO05D009919 9.7e-09 63.2 33 90.9
Eucgr.G01056 Eucalyptus grandis HOM05D003560 ORTHO05D009919 1.8e-07 58.9 30 90.0


User provided reference genes

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