Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib138G1405 Durio zibethinus HOM05D000113 ORTHO05D186124 3.0e-93 345.1 172 100.0
Thecc.02G023600 Theobroma cacao HOM05D000113 ORTHO05D005835 1.4e-18 97.1 79 63.3
COL.COLO4_17738 Corchorus olitorius HOM05D000113 ORTHO05D005835 4.2e-18 95.5 79 62.0
Atru.chr6.769 Acer truncatum HOM05D000113 ORTHO05D005835 5.5e-18 95.1 79 63.3
MD15G1433900 Malus domestica HOM05D000113 ORTHO05D005835 7.2e-18 94.7 79 58.2
Gohir.A01G182800 Gossypium hirsutum HOM05D000113 ORTHO05D005835 9.4e-18 94.4 79 62.0
Gohir.D01G173900 Gossypium hirsutum HOM05D000113 ORTHO05D005835 9.4e-18 94.4 79 62.0
Gorai.002G216000 Gossypium raimondii HOM05D000113 ORTHO05D005835 9.4e-18 94.4 79 62.0
Cfa004507 Carpinus fangiana HOM05D003925 ORTHO05D005835 1.2e-17 94.0 77 61.0
QL02p100213 Quercus lobata HOM05D000113 ORTHO05D005835 1.2e-17 94.0 79 59.5
CiPaw.06G173200 Carya illinoinensis HOM05D000113 ORTHO05D005835 1.6e-17 93.6 79 60.8
Potri.004G222900 Populus trichocarpa HOM05D000113 ORTHO05D005835 1.6e-17 93.6 79 62.0
Prupe.1G577400 Prunus persica HOM05D000113 ORTHO05D005835 2.1e-17 93.2 79 58.2
THA.LOC104820242 Tarenaya hassleriana HOM05D000113 ORTHO05D005835 2.1e-17 93.2 79 62.0
CANSAT54G2975 Cannabis sativa HOM05D000113 ORTHO05D005835 3.6e-17 92.4 79 58.2
Psat4g000920 Pisum sativum HOM05D000113 ORTHO05D005835 3.6e-17 92.4 79 59.5
A09p18610 Brassica napus HOM05D000113 ORTHO05D005835 6.1e-17 91.7 79 62.0
C09p23220 Brassica napus HOM05D000113 ORTHO05D005835 6.1e-17 91.7 79 62.0
BolC9t55241H Brassica oleracea HOM05D000113 ORTHO05D005835 6.1e-17 91.7 79 62.0
BraA09t37485Z Brassica rapa HOM05D000113 ORTHO05D005835 6.1e-17 91.7 79 62.0
Duzib052G0463 Durio zibethinus HOM05D000113 ORTHO05D005835 6.1e-17 91.7 79 63.3
RcHm_v2.0_Chr7g0209021 Rosa chinensis HOM05D000113 ORTHO05D005835 6.1e-17 91.7 79 57.0
Sp2g05520 Schrenkiella parvula HOM05D000113 ORTHO05D005835 6.1e-17 91.7 79 62.0
TPR.G5965 Trifolium pratense HOM05D000113 ORTHO05D005835 6.1e-17 91.7 79 58.2
Carub.0002s0657 Capsella rubella HOM05D000113 ORTHO05D005835 7.9e-17 91.3 79 59.5
FvH4_5g21580 Fragaria vesca HOM05D000113 ORTHO05D005835 7.9e-17 91.3 79 57.0
FAN08G0819 Fragaria x ananassa HOM05D000113 ORTHO05D005835 7.9e-17 91.3 79 57.0
FAN18G0136 Fragaria x ananassa HOM05D000113 ORTHO05D005835 7.9e-17 91.3 79 57.0
TAR381G0519 Trochodendron aralioides HOM05D000113 ORTHO05D005835 7.9e-17 91.3 79 58.2
Actinidia39011 Actinidia chinensis HOM05D000113 ORTHO05D005835 1.0e-16 90.9 79 59.5
Dinv07476 Davidia involucrata HOM05D003925 ORTHO05D005835 1.0e-16 90.9 79 62.0
Thhalv10023215m.g Eutrema salsugineum HOM05D000113 ORTHO05D005835 1.0e-16 90.9 79 60.8
AL2G17950 Arabidopsis lyrata HOM05D000113 ORTHO05D005835 1.4e-16 90.5 79 58.2
arahy.Tifrunner.gnm1.ann1.F0MMCG Arachis hypogaea HOM05D000113 ORTHO05D005835 1.4e-16 90.5 80 57.5
BcaB07g31161 Brassica carinata HOM05D000113 ORTHO05D005835 1.4e-16 90.5 79 60.8
MD15G1433800 Malus domestica HOM05D000113 ORTHO05D005835 1.4e-16 90.5 102 46.1
Manes.10G119700 Manihot esculenta HOM05D000113 ORTHO05D005835 1.4e-16 90.5 79 60.8
Medtr4g134790 Medicago truncatula HOM05D000113 ORTHO05D005835 2.3e-16 89.7 79 57.0
TWI59G0289 Tripterygium wilfordii HOM05D000113 ORTHO05D005835 2.3e-16 89.7 79 58.2
Aa31LG2G11010 Aethionema arabicum HOM05D000113 ORTHO05D005835 3.0e-16 89.4 79 60.8
CARHR054040 Cardamine hirsuta HOM05D000113 ORTHO05D005835 3.9e-16 89.0 79 60.8
Ca_13538_v3 Cicer arietinum L. HOM05D000113 ORTHO05D005835 3.9e-16 89.0 79 55.7
ECA240G0867 Erigeron canadensis HOM05D000113 ORTHO05D005835 3.9e-16 89.0 82 54.9
Ciclev10000030m.g Citrus clementina HOM05D000113 ORTHO05D005835 5.1e-16 88.6 79 59.5
Haze_10062 Corylus avellana HOM05D000113 ORTHO05D005835 5.1e-16 88.6 98 50.0
Sabra01G0168800 Salix brachista HOM05D000113 ORTHO05D005835 6.7e-16 88.2 79 58.2
GSVIVG01023271001 Vitis vinifera HOM05D000113 ORTHO05D005835 6.7e-16 88.2 79 59.5
AT1G58060 Arabidopsis thaliana HOM05D000113 ORTHO05D005835 1.1e-15 87.4 79 57.0
CSS0010677 Camellia sinensis var. sinensis HOM05D000113 ORTHO05D005835 1.1e-15 87.4 79 58.2
MELO3C019423.2 Cucumis melo HOM05D000113 ORTHO05D005835 1.5e-15 87.0 79 57.0
CsaV3_3G019320 Cucumis sativus L. HOM05D000113 ORTHO05D005835 1.5e-15 87.0 79 57.0
FAN04G1601 Fragaria x ananassa HOM05D000113 ORTHO05D005835 1.5e-15 87.0 77 58.4
Sed0015728 Sechium edule HOM05D000113 ORTHO05D005835 1.5e-15 87.0 79 57.0
vmacro01724 Vaccinium macrocarpon HOM05D000113 ORTHO05D005835 2.0e-15 86.7 79 59.5
arahy.Tifrunner.gnm1.ann1.NM6SG7 Arachis hypogaea HOM05D000113 ORTHO05D005835 3.3e-15 85.9 79 55.7
Cc02_g23020 Coffea canephora HOM05D000113 ORTHO05D005835 3.3e-15 85.9 79 57.0
Lalb_Chr13g0304501 Lupinus albus HOM05D000113 ORTHO05D005835 3.3e-15 85.9 79 54.4
MBI09_g02133_MAGBIO Magnolia biondii HOM05D000113 ORTHO05D005835 3.3e-15 85.9 86 50.0
DCAR_029273 Daucus carota HOM05D000113 ORTHO05D005835 7.4e-15 84.7 79 55.7
Lj2g0019885 Lotus japonicus HOM05D000113 ORTHO05D005835 7.4e-15 84.7 79 54.4
CSS0005911 Camellia sinensis var. sinensis HOM05D000113 ORTHO05D005835 9.7e-15 84.3 79 57.0
AT1G58050 Arabidopsis thaliana HOM05D000113 ORTHO05D005835 1.3e-14 84.0 79 57.0
Lj5C262G4 Lonicera japonica HOM05D003925 ORTHO05D005835 1.3e-14 84.0 79 55.7
PGR042G0228 Punica granatum HOM05D000113 ORTHO05D005835 1.3e-14 84.0 79 54.4
Aqoxy6G00123 Aquilegia oxysepala HOM05D000113 ORTHO05D005835 1.7e-14 83.6 79 57.0
MSTRG.16496 Avicennia marina HOM05D000113 ORTHO05D005835 1.7e-14 83.6 79 54.4
ClCG05G009410 Citrullus lanatus HOM05D000113 ORTHO05D005835 1.7e-14 83.6 77 55.8
BcaC06g31782 Brassica carinata HOM05D003037 ORTHO05D005835 2.2e-14 83.2 79 53.2
Carub.0002s0658 Capsella rubella HOM05D000113 ORTHO05D005835 2.8e-14 82.8 79 55.7
AL2G17920 Arabidopsis lyrata HOM05D000113 ORTHO05D005835 3.7e-14 82.4 79 54.4
HanXRQChr03g0065101 Helianthus annuus HOM05D000113 ORTHO05D005835 3.7e-14 82.4 79 54.4
Eucgr.G00345 Eucalyptus grandis HOM05D000113 ORTHO05D005835 4.8e-14 82.0 79 53.2
Glyma.17G001100 Glycine max HOM05D000113 ORTHO05D005835 4.8e-14 82.0 79 51.9
Nn5g27790 Nelumbo nucifera HOM05D000113 ORTHO05D005835 4.8e-14 82.0 79 51.9
Sp2g05550 Schrenkiella parvula HOM05D000113 ORTHO05D005835 4.8e-14 82.0 80 53.8
AagrBONN_evm.TU.Sc2ySwM_344.5572 Anthoceros agrestis HOM05D000113 ORTHO05D005835 6.3e-14 81.6 86 47.7
CAN.G798.54 Capsicum annuum HOM05D000113 ORTHO05D005835 1.4e-13 80.5 79 50.6
Migut.B00785 Erythranthe guttata HOM05D000113 ORTHO05D005835 1.4e-13 80.5 80 53.8
Nitab4.5_0002596g0100 Nicotiana tabacum HOM05D000113 ORTHO05D005835 1.4e-13 80.5 79 50.6
SEGI_31902 Sequoiadendron giganteum HOM05D000113 ORTHO05D005835 1.4e-13 80.5 86 47.7
Sopen01g046100 Solanum pennellii HOM05D000113 ORTHO05D005835 1.4e-13 80.5 79 50.6
unitig_26.g9028 Utricularia gibba HOM05D003925 ORTHO05D005835 1.8e-13 80.1 92 45.7
Lsat_1_v5_gn_9_120661 Lactuca sativa HOM05D000113 ORTHO05D005835 2.4e-13 79.7 79 53.2
ATR0626G246 Amborella trichopoda HOM05D000113 ORTHO05D005835 3.1e-13 79.3 86 47.7
Phvul.003G075000 Phaseolus vulgaris HOM05D000113 ORTHO05D005835 4.1e-13 79.0 79 50.6
Solyc01g103690.4 Solanum lycopersicum HOM05D000113 ORTHO05D005835 4.1e-13 79.0 79 49.4
Ah.02g128270 Amaranthus hybridus HOM05D000113 ORTHO05D005835 5.3e-13 78.6 79 50.6
Nitab4.5_0000948g0060 Nicotiana tabacum HOM05D000113 ORTHO05D005835 5.3e-13 78.6 79 49.4
Peaxi162Scf00011g00940 Petunia axillaris HOM05D000113 ORTHO05D005835 6.9e-13 78.2 79 50.6
Sc07g0004580 Simmondsia chinensis HOM05D000113 ORTHO05D005835 1.2e-12 77.4 79 50.6
EL10Ac6g14137 Beta vulgaris HOM05D000113 ORTHO05D005835 1.5e-12 77.0 79 49.4
HPP92_005690 Vanilla planifolia HOM05D000113 ORTHO05D005835 1.5e-12 77.0 85 45.9
SGA_v2.0_scaffold272G46375 Striga asiatica HOM05D000113 ORTHO05D005835 2.0e-12 76.6 79 51.9
AUR62040619 Chenopodium quinoa HOM05D000113 ORTHO05D005835 3.4e-12 75.9 79 49.4
HPP92_005700 Vanilla planifolia HOM05D000113 ORTHO05D005835 3.4e-12 75.9 79 46.8
Zm00001eb082690 Zea mays HOM05D000113 ORTHO05D005835 2.9e-11 72.8 86 43.0
CBR_g34283 Chara braunii HOM05D000113 ORTHO05D005835 5.0e-11 72.0 79 46.8
SMO004G0013 Selaginella moellendorffii HOM05D000113 ORTHO05D005835 6.5e-11 71.6 79 44.3
Mapoly0048s0072 Marchantia polymorpha HOM05D000113 ORTHO05D005835 1.1e-10 70.9 79 49.4
SMO164G0084 Selaginella moellendorffii HOM05D000113 ORTHO05D005835 1.4e-10 70.5 86 39.5
Thhalv10023216m.g Eutrema salsugineum HOM05D000113 ORTHO05D005835 4.7e-09 65.5 79 46.8
Pp3c26_14400 Physcomitrium patens HOM05D000113 ORTHO05D005835 1.0e-08 64.3 79 40.5
A03p66400 Brassica napus HOM05D000113 ORTHO05D005835 1.5e-07 60.5 73 43.8
BraA03t15696Z Brassica rapa HOM05D000113 ORTHO05D005835 1.5e-07 60.5 73 43.8
PRCOL_00002902 Prasinoderma coloniale HOM05D000113 ORTHO05D005835 6.3e-06 55.1 80 41.2


User provided reference genes

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