Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib138G1106 Durio zibethinus HOM05D007601 ORTHO05D009605 1.8e-66 255.8 126 100.0
Gohir.A11G107400 Gossypium hirsutum HOM05D007601 ORTHO05D009605 2.0e-62 242.3 126 92.9
Gohir.D11G112200 Gossypium hirsutum HOM05D007601 ORTHO05D009605 1.5e-60 236.1 126 92.1
COL.COLO4_23178 Corchorus olitorius HOM05D007601 ORTHO05D009605 1.6e-59 232.6 126 89.7
Thecc.01G320300 Theobroma cacao HOM05D007601 ORTHO05D009605 8.0e-59 230.3 126 89.7
Gorai.007G120500 Gossypium raimondii HOM05D007601 ORTHO05D009605 1.9e-52 209.1 106 95.3
Manes.01G231900 Manihot esculenta HOM05D007601 ORTHO05D009605 4.3e-52 208.0 122 80.3
QL12p018497 Quercus lobata HOM05D007601 ORTHO05D009605 9.5e-52 206.8 121 78.5
arahy.Tifrunner.gnm1.ann1.FU6CGW Arachis hypogaea HOM05D007601 ORTHO05D009605 1.2e-51 206.5 120 81.7
arahy.Tifrunner.gnm1.ann1.UJ54IQ Arachis hypogaea HOM05D007601 ORTHO05D009605 2.1e-51 205.7 120 80.8
Potri.002G191200 Populus trichocarpa HOM05D007601 ORTHO05D009605 4.7e-51 204.5 123 80.5
Dinv33148 Davidia involucrata HOM05D007601 ORTHO05D009605 2.3e-50 202.2 131 75.6
Ciclev10022849m.g Citrus clementina HOM05D007601 ORTHO05D009605 1.2e-49 199.9 125 78.4
Cpa.g.c29544.1 Carica papaya HOM05D007601 ORTHO05D009605 2.6e-49 198.7 128 76.6
VMungo1383G2396 Vigna mungo HOM05D007601 ORTHO05D009605 3.4e-49 198.4 118 81.4
CSS0043622 Camellia sinensis var. sinensis HOM05D007601 ORTHO05D009605 4.4e-49 198.0 123 75.6
Atru.chr5.923 Acer truncatum HOM05D007601 ORTHO05D009605 7.5e-49 197.2 122 77.0
Glyma.19G219400 Glycine max HOM05D007601 ORTHO05D009605 9.8e-49 196.8 118 77.1
Glyma.03G222200 Glycine max HOM05D007601 ORTHO05D009605 1.3e-48 196.4 119 77.3
Sabra02G0164400 Salix brachista HOM05D007601 ORTHO05D009605 1.3e-48 196.4 122 77.9
CSS0036648 Camellia sinensis var. sinensis HOM05D007601 ORTHO05D009605 2.2e-48 195.7 123 74.0
Eucgr.H00897 Eucalyptus grandis HOM05D007601 ORTHO05D009605 2.2e-48 195.7 123 74.8
Prupe.3G005400 Prunus persica HOM05D007601 ORTHO05D009605 2.9e-48 195.3 124 75.0
Phvul.001G215600 Phaseolus vulgaris HOM05D007601 ORTHO05D009605 8.3e-48 193.7 118 78.0
CiPaw.07G121600 Carya illinoinensis HOM05D007601 ORTHO05D009605 1.4e-47 193.0 122 76.2
Medtr7g109980 Medicago truncatula HOM05D007601 ORTHO05D009605 1.4e-47 193.0 119 75.6
MD17G1280000 Malus domestica HOM05D007601 ORTHO05D009605 1.9e-47 192.6 127 74.0
Lalb_Chr04g0260071 Lupinus albus HOM05D007601 ORTHO05D009605 4.1e-47 191.4 120 75.0
GSVIVG01028182001 Vitis vinifera HOM05D007601 ORTHO05D009605 4.1e-47 191.4 122 74.6
THA.LOC104815915 Tarenaya hassleriana HOM05D007601 ORTHO05D009605 5.4e-47 191.0 120 73.3
TAR633G2747 Trochodendron aralioides HOM05D007601 ORTHO05D009605 1.2e-46 189.9 124 72.6
Sc14g0006440 Simmondsia chinensis HOM05D007601 ORTHO05D009605 1.6e-46 189.5 126 73.0
MSTRG.18076 Avicennia marina HOM05D007601 ORTHO05D009605 2.0e-46 189.1 122 75.4
MD09G1287800 Malus domestica HOM05D007601 ORTHO05D009605 2.0e-46 189.1 118 75.4
Aa31LG5G1450 Aethionema arabicum HOM05D007601 ORTHO05D009605 3.5e-46 188.3 120 70.8
TWI59G0276 Tripterygium wilfordii HOM05D007601 ORTHO05D009605 7.8e-46 187.2 121 76.9
Ca_09231_v3 Cicer arietinum L. HOM05D007601 ORTHO05D009605 1.0e-45 186.8 119 73.9
Psat3g018760 Pisum sativum HOM05D007601 ORTHO05D009605 2.3e-45 185.7 119 73.9
TPR.G4122 Trifolium pratense HOM05D007601 ORTHO05D009605 2.3e-45 185.7 119 73.1
Hma1.2p1_0965F.1_g242190 Hydrangea macrophylla HOM05D007601 ORTHO05D009605 3.0e-45 185.3 124 71.8
Sopen06g036000 Solanum pennellii HOM05D007601 ORTHO05D009605 3.0e-45 185.3 124 71.8
Lj1g0003568 Lotus japonicus HOM05D007601 ORTHO05D009605 3.9e-45 184.9 117 72.6
Oeu044742.1 Olea europaea HOM05D007601 ORTHO05D009605 5.0e-45 184.5 122 72.1
DCAR_002918 Daucus carota HOM05D007601 ORTHO05D009605 6.6e-45 184.1 120 74.2
RcHm_v2.0_Chr3g0486741 Rosa chinensis HOM05D007601 ORTHO05D009605 6.6e-45 184.1 114 76.3
FvH4_1g26600 Fragaria vesca HOM05D007601 ORTHO05D009605 4.3e-44 181.4 123 69.9
FAN26G1400 Fragaria x ananassa HOM05D007601 ORTHO05D009605 4.3e-44 181.4 124 69.4
Sp6g01760 Schrenkiella parvula HOM05D007601 ORTHO05D009605 4.3e-44 181.4 122 67.2
CANSAT25G0069 Cannabis sativa HOM05D007601 ORTHO05D009605 5.6e-44 181.0 123 70.7
Thhalv10029076m.g Eutrema salsugineum HOM05D007601 ORTHO05D009605 7.3e-44 180.6 120 68.3
CsaV3_3G031680 Cucumis sativus L. HOM05D007601 ORTHO05D009605 1.6e-43 179.5 120 68.3
Carub.0006s3532 Capsella rubella HOM05D007601 ORTHO05D009605 2.1e-43 179.1 122 67.2
Migut.D00044 Erythranthe guttata HOM05D007601 ORTHO05D009605 2.1e-43 179.1 133 67.7
Sed0008912 Sechium edule HOM05D007601 ORTHO05D009605 2.1e-43 179.1 120 70.0
BcaB01g02392 Brassica carinata HOM05D007601 ORTHO05D009605 2.8e-43 178.7 120 67.5
PSO210G6513 Papaver somniferum HOM05D007601 ORTHO05D009605 2.8e-43 178.7 121 69.4
C03p38320 Brassica napus HOM05D007601 ORTHO05D009605 3.6e-43 178.3 118 68.6
Hund09590 Selenicereus undatus HOM05D007601 ORTHO05D009605 1.4e-42 176.4 123 68.3
HanXRQChr01g0010181 Helianthus annuus HOM05D007601 ORTHO05D009605 1.8e-42 176.0 126 65.9
AL6G51380 Arabidopsis lyrata HOM05D007601 ORTHO05D009605 3.1e-42 175.3 120 65.8
BraA03t12322Z Brassica rapa HOM05D007601 ORTHO05D009605 3.1e-42 175.3 116 68.1
A03p31410 Brassica napus HOM05D007601 ORTHO05D009605 4.0e-42 174.9 116 68.1
BcaC01g06793 Brassica carinata HOM05D007601 ORTHO05D009605 5.2e-42 174.5 118 66.9
BcaC01g06795 Brassica carinata HOM05D007601 ORTHO05D009605 5.2e-42 174.5 118 66.9
BolC3t16113H Brassica oleracea HOM05D007601 ORTHO05D009605 5.2e-42 174.5 118 66.9
ECA248G1243 Erigeron canadensis HOM05D007601 ORTHO05D009605 6.8e-42 174.1 119 68.1
Rhsim01G0292900 Rhododendron simsii HOM05D007601 ORTHO05D009605 8.9e-42 173.7 109 73.4
CARHR249870 Cardamine hirsuta HOM05D007601 ORTHO05D009605 5.8e-41 171.0 120 64.2
AT4G01897 Arabidopsis thaliana HOM05D007601 ORTHO05D009605 9.8e-41 170.2 120 64.2
Aqoxy2G02617 Aquilegia oxysepala HOM05D007601 ORTHO05D009605 1.7e-40 169.5 120 70.8
PSO761G0263 Papaver somniferum HOM05D007601 ORTHO05D009605 1.7e-40 169.5 117 69.2
EL10As5g23595 Beta vulgaris HOM05D007601 ORTHO05D009605 2.9e-40 168.7 120 64.2
ClCG10G011680 Citrullus lanatus HOM05D007601 ORTHO05D009605 4.9e-40 167.9 141 58.9
AUR62011748 Chenopodium quinoa HOM05D007601 ORTHO05D009605 6.4e-40 167.5 124 64.5
FAN19G1881 Fragaria x ananassa HOM05D007601 ORTHO05D009605 1.1e-39 166.8 150 57.3
MELO3C012921.2 Cucumis melo HOM05D007601 ORTHO05D009605 7.8e-38 160.6 99 75.8
Zm00001eb043090 Zea mays HOM05D007601 ORTHO05D009605 3.0e-37 158.7 117 64.1
FAN28G1650 Fragaria x ananassa HOM05D007601 ORTHO05D009605 3.9e-37 158.3 99 73.7
CAN.G1209.15 Capsicum annuum HOM05D007601 ORTHO05D009605 5.1e-37 157.9 120 63.3
Cc01_g21960 Coffea canephora HOM05D007601 ORTHO05D009605 2.5e-36 155.6 122 63.1
Os03g0564200 Oryza sativa ssp. japonica HOM05D007601 ORTHO05D009605 3.1e-34 148.7 114 63.2
Nn4g25447 Nelumbo nucifera HOM05D007601 ORTHO05D009605 3.7e-32 141.7 122 58.2
AUR62024591 Chenopodium quinoa HOM05D007601 ORTHO05D009605 1.9e-28 129.4 122 54.1
SalBow6G1877 Salvia bowleyana HOM05D007601 ORTHO05D009605 7.3e-28 127.5 79 74.7
Solyc06g084625.1 Solanum lycopersicum HOM05D007601 ORTHO05D009605 6.2e-27 124.4 80 73.8
AagrBONN_evm.TU.Sc2ySwM_228.1634 Anthoceros agrestis HOM05D007601 ORTHO05D009605 2.4e-26 122.5 111 54.1
Pp3c1_30400 Physcomitrium patens HOM05D007601 ORTHO05D009605 2.4e-26 122.5 118 50.0
FAN23G1483 Fragaria x ananassa HOM05D007601 ORTHO05D009605 2.6e-25 119.0 80 70.0
MBI19_g32697_MAGBIO Magnolia biondii HOM05D007601 ORTHO05D009605 1.4e-23 113.2 95 62.1
vmacro15096 Vaccinium macrocarpon HOM05D007601 ORTHO05D009605 4.3e-20 101.7 59 74.6
Mapoly0105s0007 Marchantia polymorpha HOM05D007601 ORTHO05D009605 9.6e-20 100.5 112 48.2
CDE05G3673 Ceratophyllum demersum HOM05D007601 ORTHO05D009605 6.2e-19 97.8 79 64.6
SMO196G0166 Selaginella moellendorffii HOM05D007601 ORTHO05D009605 7.1e-15 84.3 104 44.2
Thhalv10009552m.g Eutrema salsugineum HOM05D007601 ORTHO05D009605 2.5e-12 75.9 85 48.2
Solyc04g150173.1 Solanum lycopersicum HOM05D007601 ORTHO05D009605 6.9e-10 67.8 45 68.9
CBR_g40435 Chara braunii HOM05D007601 ORTHO05D009605 1.5e-09 66.6 97 43.3


User provided reference genes

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