Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib133G1388 Durio zibethinus HOM05D007363 ORTHO05D009018 4.2e-81 304.7 158 100.0
Duzib138G0908 Durio zibethinus HOM05D007363 ORTHO05D009018 8.2e-61 237.3 155 81.3
Gohir.A07G148800 Gossypium hirsutum HOM05D007363 ORTHO05D009018 1.4e-60 236.5 154 81.2
COL.COLO4_05892 Corchorus olitorius HOM05D007363 ORTHO05D009018 2.0e-59 232.6 158 75.3
Gorai.001G177500 Gossypium raimondii HOM05D007363 ORTHO05D009018 5.0e-58 228.0 154 78.6
Gohir.D07G155100 Gossypium hirsutum HOM05D007363 ORTHO05D009018 3.2e-57 225.3 154 77.9
Thecc.01G258000 Theobroma cacao HOM05D007363 ORTHO05D009018 1.2e-56 223.4 154 75.3
TWI18G0555 Tripterygium wilfordii HOM05D007363 ORTHO05D009018 2.2e-50 202.6 152 69.1
Potri.002G038200 Populus trichocarpa HOM05D007363 ORTHO05D009018 2.5e-49 199.1 152 69.1
GSVIVG01028336001 Vitis vinifera HOM05D007363 ORTHO05D009018 1.4e-47 193.4 154 66.9
TAR365G0665 Trochodendron aralioides HOM05D007363 ORTHO05D009018 1.2e-46 190.3 152 65.8
Potri.005G224600 Populus trichocarpa HOM05D007363 ORTHO05D009018 1.5e-46 189.9 150 64.7
Manes.12G032500 Manihot esculenta HOM05D007363 ORTHO05D009018 5.7e-46 188.0 156 62.2
Sabra05G0173300 Salix brachista HOM05D007363 ORTHO05D009018 5.7e-46 188.0 150 64.7
CSS0036840 Camellia sinensis var. sinensis HOM05D007363 ORTHO05D009018 2.2e-45 186.0 153 64.7
Prupe.8G223500 Prunus persica HOM05D007363 ORTHO05D009018 2.2e-45 186.0 156 60.9
CiPaw.04G186800 Carya illinoinensis HOM05D007363 ORTHO05D009018 3.7e-45 185.3 148 62.2
Aqoxy5G00227 Aquilegia oxysepala HOM05D007363 ORTHO05D009018 1.4e-44 183.3 162 58.6
Nn3g19660 Nelumbo nucifera HOM05D007363 ORTHO05D009018 4.1e-44 181.8 163 60.1
Atru.chr5.1691 Acer truncatum HOM05D007363 ORTHO05D009018 5.4e-44 181.4 149 64.4
MD05G1197000 Malus domestica HOM05D007363 ORTHO05D009018 5.4e-44 181.4 149 60.4
FAN20G0360 Fragaria x ananassa HOM05D007363 ORTHO05D009018 2.0e-43 179.5 125 68.8
Dinv22404 Davidia involucrata HOM05D007363 ORTHO05D009018 3.5e-43 178.7 159 61.6
Hma1.2p1_0576F.1_g182050 Hydrangea macrophylla HOM05D007363 ORTHO05D009018 5.9e-43 177.9 124 69.4
FvH4_2g21450 Fragaria vesca HOM05D007363 ORTHO05D009018 1.0e-42 177.2 125 68.0
FAN24G0389 Fragaria x ananassa HOM05D007363 ORTHO05D009018 1.0e-42 177.2 125 68.0
Lj1g0022592 Lotus japonicus HOM05D007363 ORTHO05D009018 1.0e-42 177.2 155 60.6
Cfa002427 Carpinus fangiana HOM05D007363 ORTHO05D009018 1.3e-42 176.8 147 63.9
RcHm_v2.0_Chr6g0288091 Rosa chinensis HOM05D007363 ORTHO05D009018 1.3e-42 176.8 125 68.0
Ciclev10024115m.g Citrus clementina HOM05D007363 ORTHO05D009018 1.7e-42 176.4 122 68.0
PSO063G1687 Papaver somniferum HOM05D007363 ORTHO05D009018 2.2e-42 176.0 157 61.1
PSO017G1673 Papaver somniferum HOM05D007363 ORTHO05D009018 5.0e-42 174.9 157 59.9
QL09p038775 Quercus lobata HOM05D007363 ORTHO05D009018 1.5e-41 173.3 155 60.0
Peaxi162Scf00013g01119 Petunia axillaris HOM05D007363 ORTHO05D009018 1.9e-41 172.9 122 66.4
Actinidia25792 Actinidia chinensis HOM05D007363 ORTHO05D009018 2.5e-41 172.6 149 61.7
FAN15G0604 Fragaria x ananassa HOM05D007363 ORTHO05D009018 1.2e-40 170.2 113 70.8
DCAR_000936 Daucus carota HOM05D007363 ORTHO05D009018 1.6e-40 169.9 155 56.8
Nitab4.5_0020962g0010 Nicotiana tabacum HOM05D007363 ORTHO05D009018 1.6e-40 169.9 122 64.8
Rhsim01G0263400 Rhododendron simsii HOM05D007363 ORTHO05D009018 1.6e-40 169.9 145 61.4
Solyc06g083880.2 Solanum lycopersicum HOM05D007363 ORTHO05D009018 1.6e-40 169.9 122 63.9
Sopen06g035280 Solanum pennellii HOM05D007363 ORTHO05D009018 1.6e-40 169.9 122 63.9
PGSC0003DMG400020073 Solanum tuberosum HOM05D007363 ORTHO05D009018 2.1e-40 169.5 122 63.9
CANSAT01G1440 Cannabis sativa HOM05D007363 ORTHO05D009018 8.0e-40 167.5 121 63.6
ECA247G1846 Erigeron canadensis HOM05D007363 ORTHO05D009018 1.4e-39 166.8 120 65.0
HanXRQChr10g0280941 Helianthus annuus HOM05D007363 ORTHO05D009018 1.4e-39 166.8 145 57.2
Lj1C66G14 Lonicera japonica HOM05D007363 ORTHO05D009018 1.8e-39 166.4 147 58.5
Lalb_Chr01g0019641 Lupinus albus HOM05D007363 ORTHO05D009018 1.8e-39 166.4 149 58.4
Lsat_1_v5_gn_9_8480 Lactuca sativa HOM05D007363 ORTHO05D009018 4.0e-39 165.2 152 55.9
Cpa.g.sc165.9 Carica papaya HOM05D007363 ORTHO05D009018 5.2e-39 164.9 125 62.4
Glyma.03G163300 Glycine max HOM05D007363 ORTHO05D009018 5.2e-39 164.9 121 65.3
VMungo1383G1059 Vigna mungo HOM05D007363 ORTHO05D009018 5.2e-39 164.9 150 58.0
arahy.Tifrunner.gnm1.ann1.1CEJ34 Arachis hypogaea HOM05D007363 ORTHO05D009018 6.8e-39 164.5 123 63.4
ATR0736G122 Amborella trichopoda HOM05D007363 ORTHO05D009018 8.8e-39 164.1 122 63.9
Phvul.001G161200 Phaseolus vulgaris HOM05D007363 ORTHO05D009018 8.8e-39 164.1 144 59.7
Oeu026230.1 Olea europaea HOM05D007363 ORTHO05D009018 1.2e-38 163.7 150 58.7
Cc01_g18330 Coffea canephora HOM05D007363 ORTHO05D009018 2.6e-38 162.5 121 62.8
Medtr7g096960 Medicago truncatula HOM05D007363 ORTHO05D009018 2.6e-38 162.5 157 53.5
Ca_08677_v3 Cicer arietinum L. HOM05D001001 ORTHO05D000808 7.5e-38 161.0 121 63.6
Ca_08711_v3 Cicer arietinum L. HOM05D001001 ORTHO05D000808 7.5e-38 161.0 121 63.6
arahy.Tifrunner.gnm1.ann1.F24DAH Arachis hypogaea HOM05D007363 ORTHO05D009018 9.8e-38 160.6 156 55.8
AUR62011874 Chenopodium quinoa HOM05D005758 ORTHO05D007218 3.7e-37 158.7 130 57.7
AUR62024717 Chenopodium quinoa HOM05D007363 ORTHO05D009018 8.3e-37 157.5 122 60.7
ClCG09G007810 Citrullus lanatus HOM05D007363 ORTHO05D009018 2.4e-36 156.0 150 54.0
Sp3g33740 Schrenkiella parvula HOM05D007363 ORTHO05D009018 2.4e-36 156.0 148 56.8
SalBow6G5236 Salvia bowleyana HOM05D007363 ORTHO05D009018 3.1e-36 155.6 147 54.4
CARHR111060 Cardamine hirsuta HOM05D007363 ORTHO05D009018 4.1e-36 155.2 148 55.4
AT2G20515 Arabidopsis thaliana HOM05D007363 ORTHO05D009018 7.0e-36 154.5 161 53.4
Psat3g056960 Pisum sativum HOM05D007363 ORTHO05D009018 9.2e-36 154.1 156 50.6
THA.LOC104814517 Tarenaya hassleriana HOM05D007363 ORTHO05D009018 9.2e-36 154.1 150 53.3
EL10Ac5g10397 Beta vulgaris HOM05D007363 ORTHO05D009018 1.6e-35 153.3 151 54.3
unitig_0.g703 Utricularia gibba HOM05D007363 ORTHO05D009018 2.0e-35 152.9 149 53.7
AL3G53530 Arabidopsis lyrata HOM05D007363 ORTHO05D009018 2.7e-35 152.5 150 53.3
BcaB08g34913 Brassica carinata HOM05D007363 ORTHO05D009018 5.9e-35 151.4 148 54.7
Haze_24634 Corylus avellana HOM05D007363 ORTHO05D009018 5.9e-35 151.4 107 70.1
Thhalv10002113m.g Eutrema salsugineum HOM05D007363 ORTHO05D009018 7.7e-35 151.0 153 55.6
MELO3C015729.2 Cucumis melo HOM05D007363 ORTHO05D009018 1.3e-34 150.2 142 52.8
Eucgr.K03259 Eucalyptus grandis HOM05D007363 ORTHO05D009018 1.7e-34 149.8 146 56.2
Eucgr.L02952 Eucalyptus grandis HOM05D007363 ORTHO05D009018 1.7e-34 149.8 146 56.2
BcaB01g04373 Brassica carinata HOM05D007363 ORTHO05D009018 2.3e-34 149.4 153 55.6
Carub.0003s3497 Capsella rubella HOM05D007363 ORTHO05D009018 5.0e-34 148.3 158 52.5
CsaV3_7G027320 Cucumis sativus L. HOM05D007363 ORTHO05D009018 5.0e-34 148.3 156 50.6
A03p13820 Brassica napus HOM05D007363 ORTHO05D009018 8.6e-34 147.5 151 55.0
BolC3t14048H Brassica oleracea HOM05D007363 ORTHO05D009018 8.6e-34 147.5 151 54.3
Sed0008485 Sechium edule HOM05D007363 ORTHO05D009018 1.1e-33 147.1 124 57.3
BcaC01g06392 Brassica carinata HOM05D007363 ORTHO05D009018 1.9e-33 146.4 151 53.6
C03p16260 Brassica napus HOM05D007363 ORTHO05D009018 1.9e-33 146.4 151 53.6
BraA03t10685Z Brassica rapa HOM05D007363 ORTHO05D009018 1.9e-33 146.4 152 55.3
PGR042G3583 Punica granatum HOM05D007363 ORTHO05D009018 1.9e-33 146.4 151 54.3
SGA_v2.0_scaffold510G52612 Striga asiatica HOM05D007363 ORTHO05D009018 2.5e-33 146.0 149 50.3
Ah.02g111990 Amaranthus hybridus HOM05D007363 ORTHO05D009018 3.3e-33 145.6 131 56.5
Zm00001eb077670 Zea mays HOM05D007363 ORTHO05D009018 4.3e-33 145.2 124 56.5
Os04g0517000 Oryza sativa ssp. japonica HOM05D007363 ORTHO05D009018 1.6e-32 143.3 125 55.2
MBI10_g08049_MAGBIO Magnolia biondii HOM05D007363 ORTHO05D009018 2.1e-32 142.9 107 65.4
Aa31LG8G17460 Aethionema arabicum HOM05D004208 ORTHO05D005156 6.8e-31 137.9 151 52.3
Migut.N02204 Erythranthe guttata HOM05D007363 ORTHO05D009018 5.7e-30 134.8 138 52.2
Hma1.2p1_0576F.1_g182040 Hydrangea macrophylla HOM05D007363 ORTHO05D009018 2.2e-29 132.9 88 72.7
Hund02916 Selenicereus undatus HOM05D004102 ORTHO05D005307 2.9e-29 132.5 106 60.4
FAN27G1204 Fragaria x ananassa HOM05D007363 ORTHO05D009018 7.3e-25 117.9 82 72.0
SEGI_29869 Sequoiadendron giganteum HOM05D007363 ORTHO05D009018 4.7e-24 115.2 158 42.4
Lj2P297T63 Lonicera japonica HOM05D007363 ORTHO05D009018 2.6e-22 109.4 95 60.0
Lsat_1_v5_gn_3_73760 Lactuca sativa HOM05D007363 ORTHO05D009018 1.8e-15 86.7 120 39.2
SEGI_36288 Sequoiadendron giganteum HOM05D007363 ORTHO05D009018 9.8e-14 80.9 105 42.9
BcaC07g41210 Brassica carinata HOM05D004208 ORTHO05D005156 2.2e-13 79.7 67 64.2
Lj5P53T14 Lonicera japonica HOM05D007363 ORTHO05D009018 1.4e-12 77.0 77 55.8
SEGI_24140 Sequoiadendron giganteum HOM05D007363 ORTHO05D009018 7.1e-12 74.7 102 37.3
Lj6P94T4 Lonicera japonica HOM05D007363 ORTHO05D009018 9.5e-09 64.3 58 60.3
Pp3c4_16960 Physcomitrium patens HOM05D003750 ORTHO05D004337 1.2e-08 63.9 105 34.3
Lj6P297T4 Lonicera japonica HOM05D007363 ORTHO05D009018 3.6e-08 62.4 58 60.3
SMO367G0707 Selaginella moellendorffii HOM05D007363 ORTHO05D009018 2.3e-07 59.7 102 34.3
unitig_62.g23108 Utricularia gibba HOM05D003750 ORTHO05D004337 2.0e-06 56.6 83 36.1
Pp3c11_23110 Physcomitrium patens HOM05D003750 ORTHO05D004337 3.4e-06 55.8 114 30.7
Thecc.02G066200 Theobroma cacao HOM05D006293 ORTHO05D007971 7.6e-06 54.7 108 36.1


User provided reference genes

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